| SRR4457249 | 2nd_leaf | DAH4 | 5.88 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 4.20 | HC |
| SRR358795 | callus | wt | 11.65 | HC |
| SRR358797 | callus | wt | 9.60 | HC |
| SRR358798 | callus | wt | 12.18 | HC |
| SRR5560727 | caryopsis | wild_type | 6.35 | HC |
| SRR5560728 | caryopsis | wild_type | 6.22 | HC |
| SRR5560729 | caryopsis | wild_type | 8.89 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 5.46 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.19 | HC |
| SRR4947495 | root | control | 6.08 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.06 | HC |
| SRR7265400 | coleoptile | 2dA | 7.06 | HC |
| SRR7265401 | coleoptile | 2dA | 6.95 | HC |
| SRR7265402 | coleoptile | 2dA | 6.93 | HC |
| SRR7265403 | coleoptile | 2dN | 11.72 | HC |
| SRR7265404 | coleoptile | 2dN | 10.93 | HC |
| SRR7265405 | coleoptile | 2dN | 10.05 | HC |
| SRR7265409 | coleoptile | 3dN | 8.09 | HC |
| SRR7265410 | coleoptile | 3dN | 7.55 | HC |
| SRR7265411 | coleoptile | 3dN | 7.55 | HC |
| SRR7265415 | coleoptile | 4dN | 8.18 | HC |
| SRR7265416 | coleoptile | 4dN | 7.11 | HC |
| SRR7265417 | coleoptile | 4dN | 7.64 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 4.49 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.58 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 6.25 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.17 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 8.98 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 4.16 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.80 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.12 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 6.64 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 5.30 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.91 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 8.28 | HC |
| SRR7265373 | embryo | dry seed 0 h | 4.75 | HC |
| SRR7265374 | embryo | dry seed 0 h | 4.87 | HC |
| SRR7265375 | embryo | dry seed 0 h | 1.96 | HC |
| SRR7265377 | embryo | 1hA | 4.24 | HC |
| SRR7265378 | embryo | 1hA | 4.16 | HC |
| SRR7265379 | embryo | 1hN | 5.44 | HC |
| SRR7265380 | embryo | 1hN | 4.30 | HC |
| SRR7265381 | embryo | 1hN | 4.10 | HC |
| SRR7265382 | embryo | 3hA | 11.14 | HC |
| SRR7265383 | embryo | 3hA | 8.90 | HC |
| SRR7265384 | embryo | 3hA | 9.17 | HC |
| SRR7265385 | embryo | 3hN | 4.85 | HC |
| SRR7265386 | embryo | 3hN | 3.87 | HC |
| SRR7265387 | embryo | 3hN | 4.72 | HC |
| SRR7265388 | embryo | 12hA | 15.83 | HC |
| SRR7265389 | embryo | 12hA | 14.03 | HC |
| SRR7265390 | embryo | 12hA | 12.98 | HC |
| SRR7265391 | embryo | 12hN | 17.39 | HC |
| SRR7265392 | embryo | 12hN | 16.12 | HC |
| SRR7265393 | embryo | 12hN | 18.20 | HC |
| SRR7265394 | embryo | 24hA | 8.97 | HC |
| SRR7265395 | embryo | 24hA | 12.82 | HC |
| SRR7265396 | embryo | 24hA | 12.03 | HC |
| SRR7265397 | embryo | 24hN | 16.11 | HC |
| SRR7265398 | embryo | 24hN | 14.12 | HC |
| SRR7265399 | embryo | 24hN | 13.95 | HC |
| SRR4457232 | flag_leaf | DAH4 | 3.49 | HC |
| SRR4457233 | flag_leaf | DAH4 | 4.20 | HC |
| SRR4457245 | flag_leaf | DAH36 | 3.96 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.51 | HC |
| SRR1213691 | flower | wt | 5.69 | HC |
| SRR8060835 | leaf | wild_type | 6.83 | HC |
| SRR8060836 | leaf | wild_type | 10.63 | HC |
| SRR8060837 | leaf | wild_type | 6.57 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.18 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 5.25 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.73 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 6.06 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.64 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.88 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.74 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.29 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.70 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.08 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.49 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 5.30 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.25 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.87 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 5.89 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.91 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 5.97 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.39 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.99 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.23 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 6.52 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.40 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 5.98 | HC |
| SRR504365 | leaf | wt | 9.36 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.23 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.91 | HC |
| SRR6417967 | leaf | H2O_control | 4.51 | HC |
| SRR6417969 | leaf | H2O_control | 3.61 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 4.88 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.58 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 4.65 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 4.36 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.15 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.99 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.64 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.78 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.15 | HC |
| SRR1213692 | leaf | wt | 6.93 | HC |
| SRR1213693 | leaf | wt | 4.70 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.45 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.05 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.07 | HC |
| SRR6502088 | leaf | control | 4.79 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.76 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.46 | HC |
| SRR6502100 | leaf | control | 4.60 | HC |
| SRR5856928 | leaf | control | 2.52 | HC |
| SRR5856929 | leaf | control | 2.41 | HC |
| SRR5856933 | leaf | control | 2.55 | HC |
| SRR6168973 | leaf | none (control) | 4.63 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 7.52 | HC |
| SRR8582892 | panicle | PM | 8.09 | HC |
| SRR8582893 | panicle | PM | 6.46 | HC |
| SRR5110429 | panicle | Dawn | 5.64 | HC |
| SRR5110431 | panicle | Dawn | 5.15 | HC |
| SRR5110432 | panicle | Dawn | 4.48 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.31 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.25 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.04 | HC |
| SRR5110438 | panicle | Dawn + 7h | 5.16 | HC |
| SRR5110440 | panicle | Dawn + 7h | 5.62 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 5.39 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 5.32 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.90 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.58 | HC |
| SRR5110445 | panicle | Dusk | 6.05 | HC |
| SRR5110446 | panicle | Dusk | 4.70 | HC |
| SRR5110447 | panicle | Dusk | 5.90 | HC |
| SRR5110448 | panicle | Dusk | 6.50 | HC |
| SRR5110450 | panicle | Dawn + 14h | 5.05 | HC |
| SRR5110451 | panicle | Dawn + 14h | 4.49 | HC |
| SRR5110452 | panicle | Dawn + 14h | 5.68 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.76 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 7.30 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.56 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.75 | HC |
| SRR5110459 | panicle | Dawn + 21h | 5.52 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.55 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.03 | HC |
| SRR1633182 | panicle | WT | 9.19 | HC |
| SRR1633185 | panicle | WT | 13.00 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.96 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.72 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.22 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 12.36 | HC |
| SRR5126147 | root | "mock,1_day" | 5.33 | HC |
| SRR5126148 | root | "mock,1_day" | 4.62 | HC |
| SRR5126149 | root | "mock,1_day" | 5.17 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.30 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.91 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 2.94 | HC |
| SRR1213695 | root | wt | 4.36 | HC |
| SRR4947491 | root | Al | 6.16 | HC |
| SRR4947499 | root | Al | 5.58 | HC |
| SRR4947507 | root | Al | 6.15 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.98 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.98 | HC |
| SRR6502093 | root | 100 mM NaCl | 7.44 | HC |
| SRR6502095 | root | control | 6.47 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.87 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.26 | HC |
| SRR6502105 | root | 100 mM NaCl | 8.34 | HC |
| SRR6502106 | root | control | 4.92 | HC |
| SRR6502107 | root | control | 4.89 | HC |
| SRR6502108 | root | control | 5.93 | HC |
| SRR1740432 | root_elongation_zone | wt | 5.39 | HC |
| SRR1740433 | root_elongation_zone | wt | 5.76 | HC |
| SRR1740428 | root_meristematic_zone | wt | 5.33 | HC |
| SRR1740429 | root_meristematic_zone | wt | 4.84 | HC |
| SRR1740430 | root_meristematic_zone | wt | 7.44 | HC |
| SRR2154086 | seedling | wt | 6.46 | HC |
| SRR2154082 | seedling | wt | 5.21 | HC |
| SRR2154083 | seedling | wt | 5.55 | HC |
| SRR2154084 | seedling | wt | 5.73 | HC |
| SRR2154085 | seedling | wt | 4.93 | HC |
| SRR2154087 | seedling | wt | 6.84 | HC |
| SRR3098742 | seedling | wt | 3.25 | HC |
| SRR3098743 | seedling | wt | 2.70 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.74 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 5.01 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.40 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.56 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.24 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 4.29 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 8.00 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.14 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.10 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.20 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 6.23 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 3.90 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 3.53 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 4.45 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 4.38 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.85 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.04 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 3.43 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.21 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 3.86 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.69 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.30 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.58 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.22 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.61 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.89 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.19 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 4.12 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.50 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.74 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 13.91 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 13.32 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 12.94 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 12.29 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 10.55 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 11.90 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 14.15 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 13.78 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 16.46 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 13.52 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 15.88 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 15.33 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 14.24 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 15.55 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 13.64 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 14.35 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 13.38 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 14.84 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 16.30 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 15.79 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 13.83 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 15.72 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 7.42 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 9.21 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 12.43 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 9.29 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.36 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.94 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.92 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 9.36 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.60 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 6.96 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 6.03 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.26 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 5.13 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.24 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.89 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.83 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 4.98 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 4.44 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.99 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.44 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.87 | HC |