| SRR4457249 | 2nd_leaf | DAH4 | 76.03 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 49.73 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 67.07 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 37.99 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 33.22 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 44.93 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 22.35 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 32.66 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 34.08 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 21.46 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 19.84 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 33.22 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 52.09 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 34.20 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 61.44 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 28.91 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 49.37 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 33.37 | HC |
| SRR3745125 | anther | wt | 588.32 | HC |
| SRR3745126 | anther | wt | 802.24 | HC |
| SRR3745127 | anther | wt | 672.92 | HC |
| SRR358795 | callus | wt | 128.11 | HC |
| SRR358796 | callus | wt | 130.70 | HC |
| SRR358797 | callus | wt | 119.14 | HC |
| SRR358798 | callus | wt | 140.25 | HC |
| SRR6320473 | carpel | wt | 165.16 | HC |
| SRR6320498 | carpel | wt | 140.82 | HC |
| SRR5560727 | caryopsis | wild_type | 205.22 | HC |
| SRR5560728 | caryopsis | wild_type | 194.01 | HC |
| SRR5560729 | caryopsis | wild_type | 233.43 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 194.76 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 190.18 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 171.80 | HC |
| SRR4947495 | root | control | 263.69 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 205.08 | HC |
| SRR7265400 | coleoptile | 2dA | 190.45 | HC |
| SRR7265401 | coleoptile | 2dA | 202.97 | HC |
| SRR7265402 | coleoptile | 2dA | 205.58 | HC |
| SRR7265403 | coleoptile | 2dN | 176.51 | HC |
| SRR7265404 | coleoptile | 2dN | 153.31 | HC |
| SRR7265405 | coleoptile | 2dN | 163.97 | HC |
| SRR7265406 | coleoptile | 3dA | 221.31 | HC |
| SRR7265407 | coleoptile | 3dA | 213.73 | HC |
| SRR7265408 | coleoptile | 3dA | 160.58 | HC |
| SRR7265409 | coleoptile | 3dN | 185.60 | HC |
| SRR7265410 | coleoptile | 3dN | 189.30 | HC |
| SRR7265411 | coleoptile | 3dN | 186.41 | HC |
| SRR7265412 | coleoptile | 4dA | 124.07 | HC |
| SRR7265413 | coleoptile | 4dA | 159.51 | HC |
| SRR7265414 | coleoptile | 4dA | 146.37 | HC |
| SRR7265415 | coleoptile | 4dN | 202.04 | HC |
| SRR7265416 | coleoptile | 4dN | 204.95 | HC |
| SRR7265417 | coleoptile | 4dN | 205.53 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 258.97 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 263.93 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 260.20 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 183.95 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 202.74 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 157.69 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 135.73 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 203.01 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 153.56 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 151.19 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 179.07 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 182.02 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 191.02 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 213.91 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 204.31 | HC |
| SRR7265373 | embryo | dry seed 0 h | 62.42 | HC |
| SRR7265374 | embryo | dry seed 0 h | 58.35 | HC |
| SRR7265375 | embryo | dry seed 0 h | 19.15 | HC |
| SRR7265376 | embryo | 1hA | 63.49 | HC |
| SRR7265377 | embryo | 1hA | 58.88 | HC |
| SRR7265378 | embryo | 1hA | 70.79 | HC |
| SRR7265379 | embryo | 1hN | 67.30 | HC |
| SRR7265380 | embryo | 1hN | 66.67 | HC |
| SRR7265381 | embryo | 1hN | 68.73 | HC |
| SRR7265382 | embryo | 3hA | 75.83 | HC |
| SRR7265383 | embryo | 3hA | 71.08 | HC |
| SRR7265384 | embryo | 3hA | 72.05 | HC |
| SRR7265385 | embryo | 3hN | 67.63 | HC |
| SRR7265386 | embryo | 3hN | 73.69 | HC |
| SRR7265387 | embryo | 3hN | 66.51 | HC |
| SRR7265388 | embryo | 12hA | 116.72 | HC |
| SRR7265389 | embryo | 12hA | 122.34 | HC |
| SRR7265390 | embryo | 12hA | 127.43 | HC |
| SRR7265391 | embryo | 12hN | 98.29 | HC |
| SRR7265392 | embryo | 12hN | 105.16 | HC |
| SRR7265393 | embryo | 12hN | 115.41 | HC |
| SRR7265394 | embryo | 24hA | 179.07 | HC |
| SRR7265395 | embryo | 24hA | 168.96 | HC |
| SRR7265396 | embryo | 24hA | 177.87 | HC |
| SRR7265397 | embryo | 24hN | 135.01 | HC |
| SRR7265398 | embryo | 24hN | 138.56 | HC |
| SRR7265399 | embryo | 24hN | 131.73 | HC |
| SRR2338866 | endosprem | control | 195.13 | HC |
| SRR2338867 | endosprem | control | 72.39 | HC |
| SRR2338868 | endosprem | high_temperature | 60.10 | HC |
| SRR2338869 | endosprem | high_temperature | 143.56 | HC |
| SRR976168 | flag_leaf | wild_type | 75.01 | HC |
| SRR4457231 | flag_leaf | DAH4 | 39.80 | HC |
| SRR4457232 | flag_leaf | DAH4 | 34.29 | HC |
| SRR4457233 | flag_leaf | DAH4 | 35.38 | HC |
| SRR4457234 | flag_leaf | DAH12 | 26.24 | HC |
| SRR4457235 | flag_leaf | DAH12 | 42.99 | HC |
| SRR4457236 | flag_leaf | DAH12 | 41.65 | HC |
| SRR4457237 | flag_leaf | DAH20 | 33.95 | HC |
| SRR4457238 | flag_leaf | DAH20 | 44.64 | HC |
| SRR4457239 | flag_leaf | DAH20 | 35.36 | HC |
| SRR4457240 | flag_leaf | DAH28 | 58.26 | HC |
| SRR4457241 | flag_leaf | DAH28 | 43.48 | HC |
| SRR4457242 | flag_leaf | DAH28 | 22.46 | HC |
| SRR4457243 | flag_leaf | DAH36 | 38.02 | HC |
| SRR4457244 | flag_leaf | DAH36 | 39.66 | HC |
| SRR4457245 | flag_leaf | DAH36 | 38.11 | HC |
| SRR4457246 | flag_leaf | DAH44 | 22.42 | HC |
| SRR4457247 | flag_leaf | DAH44 | 23.80 | HC |
| SRR4457248 | flag_leaf | DAH44 | 27.95 | HC |
| SRR1213690 | flower | wt(flower buds) | 191.50 | HC |
| SRR1213691 | flower | wt | 274.03 | HC |
| SRR8060835 | leaf | wild_type | 33.20 | HC |
| SRR8060836 | leaf | wild_type | 69.21 | HC |
| SRR8060837 | leaf | wild_type | 42.25 | HC |
| SRR8240824 | leaf | wild_type | 148.51 | HC |
| SRR8240825 | leaf | wild_type | 83.27 | HC |
| SRR8240826 | leaf | wild_type | 59.77 | HC |
| SRR8240818 | leaf | wild_type | 55.31 | HC |
| SRR8240819 | leaf | wild_type | 89.21 | HC |
| SRR8240820 | leaf | wild_type | 79.03 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 158.72 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 124.35 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 137.61 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 143.53 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 56.78 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 78.29 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 71.41 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 83.63 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 82.94 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 88.26 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 61.28 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 82.44 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 78.66 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 50.67 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 66.71 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 69.19 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 72.99 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 85.55 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 76.58 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 58.35 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 90.38 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 62.14 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 53.20 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 78.43 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 70.36 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 37.58 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 72.22 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 75.36 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 52.89 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 62.53 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 70.17 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 68.08 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 57.08 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 65.83 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 53.67 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 74.88 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 68.73 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 44.31 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 59.12 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 41.96 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 67.98 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 60.47 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 40.18 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 50.95 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 67.98 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 60.47 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 40.18 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 50.95 | HC |
| SRR1761528 | leaf | drought | 67.98 | HC |
| SRR1761529 | leaf | drought | 60.47 | HC |
| SRR1761530 | leaf | control | 40.18 | HC |
| SRR1761531 | leaf | control | 50.95 | HC |
| SRR504365 | leaf | wt | 39.90 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 98.17 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 95.58 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 70.70 | HC |
| SRR6417967 | leaf | H2O_control | 56.55 | HC |
| SRR6417968 | leaf | H2O_control | 52.97 | HC |
| SRR6417969 | leaf | H2O_control | 66.63 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 57.97 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 57.64 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 126.55 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 135.47 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 65.23 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 59.63 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 92.76 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 111.21 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 68.61 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 149.48 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 65.50 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 112.38 | HC |
| SRR8611900 | leaf | Non-inoculated | 60.64 | HC |
| SRR8611901 | leaf | Non-inoculated | 64.23 | HC |
| SRR8611902 | leaf | Non-inoculated | 65.68 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 89.74 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 97.88 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 88.31 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 154.71 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 159.64 | HC |
| SRR1213692 | leaf | wt | 44.47 | HC |
| SRR1213693 | leaf | wt | 84.25 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 55.79 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 76.64 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 75.35 | HC |
| SRR6502088 | leaf | control | 43.59 | HC |
| SRR6502089 | leaf | control | 45.46 | HC |
| SRR6502090 | leaf | control | 42.69 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 44.90 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 59.37 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 57.55 | HC |
| SRR6502100 | leaf | control | 50.36 | HC |
| SRR6502101 | leaf | control | 33.50 | HC |
| SRR6502102 | leaf | control | 38.23 | HC |
| SRR5856927 | leaf | control | 201.07 | HC |
| SRR5856928 | leaf | control | 222.21 | HC |
| SRR5856929 | leaf | control | 230.06 | HC |
| SRR5856930 | leaf | salt | 175.56 | HC |
| SRR5856931 | leaf | salt | 180.12 | HC |
| SRR5856932 | leaf | salt | 212.32 | HC |
| SRR5856933 | leaf | control | 299.16 | HC |
| SRR5856934 | leaf | control | 252.67 | HC |
| SRR5856935 | leaf | control | 243.50 | HC |
| SRR5856936 | leaf | salt | 211.41 | HC |
| SRR5856937 | leaf | salt | 206.40 | HC |
| SRR5856938 | leaf | salt | 218.87 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 160.50 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 164.40 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 185.75 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 145.16 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 161.31 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 194.43 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 179.87 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 151.15 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 167.74 | HC |
| SRR6168973 | leaf | none (control) | 212.68 | HC |
| SRR6168974 | leaf | none (control) | 251.86 | HC |
| SRR6168975 | leaf | none (control) | 159.65 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 339.56 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 115.23 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 236.46 | HC |
| SRR6168979 | leaf | none (control) | 60.88 | HC |
| SRR6168980 | leaf | none (control) | 62.48 | HC |
| SRR6168981 | leaf | none (control) | 121.60 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 148.93 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 174.90 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 196.96 | HC |
| SRR8582888 | panicle | AM | 27.06 | HC |
| SRR8582889 | panicle | AM | 28.32 | HC |
| SRR8582890 | panicle | AM | 33.26 | HC |
| SRR8582891 | panicle | PM | 47.23 | HC |
| SRR8582892 | panicle | PM | 53.22 | HC |
| SRR8582893 | panicle | PM | 71.70 | HC |
| SRR5110429 | panicle | Dawn | 126.17 | HC |
| SRR5110430 | panicle | Dawn | 195.17 | HC |
| SRR5110431 | panicle | Dawn | 162.15 | HC |
| SRR5110432 | panicle | Dawn | 96.79 | HC |
| SRR4947496 | root | control | 279.10 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 151.21 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 171.43 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 161.15 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 116.19 | HC |
| SRR5110437 | panicle | Dawn + 7h | 148.20 | HC |
| SRR5110438 | panicle | Dawn + 7h | 200.90 | HC |
| SRR5110439 | panicle | Dawn + 7h | 158.98 | HC |
| SRR5110440 | panicle | Dawn + 7h | 179.10 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 279.20 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 162.15 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 146.84 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 193.29 | HC |
| SRR5110445 | panicle | Dusk | 217.49 | HC |
| SRR5110446 | panicle | Dusk | 190.56 | HC |
| SRR5110447 | panicle | Dusk | 199.08 | HC |
| SRR5110448 | panicle | Dusk | 183.18 | HC |
| SRR5110449 | panicle | Dawn + 14h | 380.08 | HC |
| SRR5110450 | panicle | Dawn + 14h | 133.86 | HC |
| SRR5110451 | panicle | Dawn + 14h | 218.21 | HC |
| SRR5110452 | panicle | Dawn + 14h | 162.34 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 107.90 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 108.60 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 105.94 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 162.26 | HC |
| SRR5110457 | panicle | Dawn + 21h | 105.67 | HC |
| SRR5110458 | panicle | Dawn + 21h | 111.92 | HC |
| SRR5110459 | panicle | Dawn + 21h | 103.88 | HC |
| SRR5110460 | panicle | Dawn + 21h | 150.97 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 104.51 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 119.31 | HC |
| SRR1633182 | panicle | WT | 16.89 | HC |
| SRR1633185 | panicle | WT | 20.99 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 113.61 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 118.13 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 132.50 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 142.19 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 147.56 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 169.17 | HC |
| SRR5126147 | root | "mock,1_day" | 266.77 | HC |
| SRR5126148 | root | "mock,1_day" | 382.17 | HC |
| SRR5126149 | root | "mock,1_day" | 238.20 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 207.10 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 219.57 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 277.59 | HC |
| SRR5126153 | root | "mock,7_days" | 300.40 | HC |
| SRR5126155 | root | "mock,7_days" | 362.26 | HC |
| SRR5126157 | root | "mock,7_days" | 227.94 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 293.46 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 235.48 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 368.80 | HC |
| SRR5126165 | root | "mock,14_days" | 236.78 | HC |
| SRR5126167 | root | "mock,14_days" | 274.46 | HC |
| SRR5126169 | root | "mock,14_days" | 392.64 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 310.12 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 281.51 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 296.88 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 271.47 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 210.25 | HC |
| SRR1213694 | root | wt | 136.47 | HC |
| SRR1213695 | root | wt | 60.85 | HC |
| SRR4947478 | root | control | 228.05 | HC |
| SRR4947479 | root | control | 241.83 | HC |
| SRR4947480 | root | control | 296.80 | HC |
| SRR4947481 | root | control | 361.65 | HC |
| SRR4947482 | root | Al | 123.55 | HC |
| SRR4947483 | root | Al | 160.32 | HC |
| SRR4947484 | root | Al | 301.72 | HC |
| SRR4947485 | root | Al | 199.99 | HC |
| SRR4947487 | root | control | 232.41 | HC |
| SRR4947488 | root | control | 268.77 | HC |
| SRR4947489 | root | control | 253.15 | HC |
| SRR4947490 | root | Al | 211.08 | HC |
| SRR4947491 | root | Al | 253.06 | HC |
| SRR4947492 | root | Al | 262.52 | HC |
| SRR4947493 | root | Al | 255.39 | HC |
| SRR4947494 | root | control | 244.29 | HC |
| SRR4947497 | root | control | 252.91 | HC |
| SRR4947498 | root | Al | 212.87 | HC |
| SRR4947499 | root | Al | 230.60 | HC |
| SRR4947500 | root | Al | 228.73 | HC |
| SRR4947501 | root | Al | 287.48 | HC |
| SRR4947502 | root | control | 211.33 | HC |
| SRR4947503 | root | control | 226.50 | HC |
| SRR4947504 | root | control | 310.41 | HC |
| SRR4947505 | root | control | 283.64 | HC |
| SRR4947506 | root | Al | 159.72 | HC |
| SRR4947507 | root | Al | 283.80 | HC |
| SRR4947508 | root | Al | 220.37 | HC |
| SRR4947509 | root | Al | 297.31 | HC |
| SRR6502091 | root | 100 mM NaCl | 212.38 | HC |
| SRR6502092 | root | 100 mM NaCl | 187.93 | HC |
| SRR6502093 | root | 100 mM NaCl | 200.21 | HC |
| SRR6502094 | root | control | 192.29 | HC |
| SRR6502095 | root | control | 179.73 | HC |
| SRR6502096 | root | control | 215.91 | HC |
| SRR6502103 | root | 100 mM NaCl | 222.54 | HC |
| SRR6502104 | root | 100 mM NaCl | 205.00 | HC |
| SRR6502105 | root | 100 mM NaCl | 199.72 | HC |
| SRR6502106 | root | control | 160.08 | HC |
| SRR6502107 | root | control | 196.18 | HC |
| SRR6502108 | root | control | 222.37 | HC |
| SRR1740434 | root_differentiation_zone | wt | 416.35 | HC |
| SRR1740435 | root_differentiation_zone | wt | 433.11 | HC |
| SRR1740436 | root_differentiation_zone | wt | 619.66 | HC |
| SRR1740431 | root_elongation_zone | wt | 378.87 | HC |
| SRR1740432 | root_elongation_zone | wt | 435.33 | HC |
| SRR1740433 | root_elongation_zone | wt | 500.90 | HC |
| SRR1740428 | root_meristematic_zone | wt | 325.08 | HC |
| SRR1740429 | root_meristematic_zone | wt | 330.92 | HC |
| SRR1740430 | root_meristematic_zone | wt | 405.99 | HC |
| SRR6441554 | seedling | wild_type | 110.16 | HC |
| SRR6441555 | seedling | wild_type | 72.24 | HC |
| SRR2154086 | seedling | wt | 197.31 | HC |
| SRR2154082 | seedling | wt | 154.10 | HC |
| SRR2154083 | seedling | wt | 208.08 | HC |
| SRR2154084 | seedling | wt | 216.73 | HC |
| SRR2154085 | seedling | wt | 141.94 | HC |
| SRR2154087 | seedling | wt | 230.98 | HC |
| SRR3098741 | seedling | wt | 73.40 | HC |
| SRR3098742 | seedling | wt | 82.03 | HC |
| SRR3098743 | seedling | wt | 80.47 | HC |
| SRR2857719 | seedling | drought_stress_0h | 143.36 | HC |
| SRR2857720 | seedling | drought_stress_1h | 137.52 | HC |
| SRR2857721 | seedling | drought_stress_6h | 150.27 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 56.57 | HC |
| SRR1944583 | seedling | no_treatment | 46.05 | HC |
| SRR358791 | seedling | wt | 44.93 | HC |
| SRR358792 | seedling | wt | 40.36 | HC |
| SRR358793 | seedling | wt | 67.86 | HC |
| SRR358794 | seedling | wt | 64.52 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 24.68 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 15.22 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 19.34 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 16.53 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 19.17 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 16.00 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.43 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 13.45 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 20.98 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 21.43 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 141.20 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 133.92 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 146.53 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 169.22 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 160.16 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 206.52 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 80.84 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 141.48 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 118.03 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 85.99 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 117.04 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 122.16 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 64.85 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 63.15 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 61.60 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 50.45 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 57.45 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 51.12 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 71.23 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 69.25 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 67.98 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 73.92 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 66.43 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 71.43 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 77.80 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 63.76 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 39.78 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 41.84 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 72.29 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 57.81 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 53.19 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 70.26 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 142.95 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 163.17 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 164.50 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 51.32 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 180.25 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 91.10 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 78.39 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 147.11 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 91.85 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 142.24 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 204.37 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 120.68 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 85.13 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 94.91 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 145.43 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 72.31 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 78.06 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 88.25 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 82.41 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 135.17 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 79.32 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 86.35 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 78.10 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 89.21 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 99.86 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 157.85 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 151.16 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 137.18 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 149.96 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 153.44 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 169.47 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 362.12 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 326.24 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 379.78 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 380.23 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 394.35 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 335.49 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 171.54 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 188.46 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 218.48 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 139.82 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 183.95 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 140.79 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 145.43 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 203.04 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 194.53 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 128.48 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 162.24 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 132.95 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 302.31 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 221.70 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 232.94 | HC |