| SRR4457249 | 2nd_leaf | DAH4 | 19.86 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 15.98 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 16.48 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 11.85 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 11.71 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 11.15 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 8.60 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 7.76 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 9.72 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 6.54 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 6.33 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 4.22 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 11.73 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 14.45 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 6.65 | HC |
| SRR3745125 | anther | wt | 13.77 | HC |
| SRR3745126 | anther | wt | 10.40 | HC |
| SRR3745127 | anther | wt | 11.10 | HC |
| SRR358795 | callus | wt | 25.55 | HC |
| SRR358796 | callus | wt | 25.09 | HC |
| SRR358797 | callus | wt | 24.99 | HC |
| SRR358798 | callus | wt | 25.35 | HC |
| SRR6320473 | carpel | wt | 28.48 | HC |
| SRR6320498 | carpel | wt | 28.40 | HC |
| SRR5560727 | caryopsis | wild_type | 28.07 | HC |
| SRR5560728 | caryopsis | wild_type | 33.25 | HC |
| SRR5560729 | caryopsis | wild_type | 36.56 | HC |
| SRR4947495 | root | control | 8.69 | HC |
| SRR7265404 | coleoptile | 2dN | 3.99 | HC |
| SRR7265405 | coleoptile | 2dN | 4.33 | HC |
| SRR7265410 | coleoptile | 3dN | 3.88 | HC |
| SRR7265415 | coleoptile | 4dN | 5.81 | HC |
| SRR7265416 | coleoptile | 4dN | 4.86 | HC |
| SRR7265417 | coleoptile | 4dN | 5.40 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.40 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 4.91 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 9.98 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.74 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 10.13 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 6.61 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 9.36 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 8.19 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 10.77 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 6.47 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 9.14 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 6.61 | HC |
| SRR7265373 | embryo | dry seed 0 h | 4.05 | HC |
| SRR7265374 | embryo | dry seed 0 h | 4.75 | HC |
| SRR7265378 | embryo | 1hA | 3.18 | HC |
| SRR7265379 | embryo | 1hN | 3.90 | HC |
| SRR7265381 | embryo | 1hN | 3.75 | HC |
| SRR7265388 | embryo | 12hA | 5.73 | HC |
| SRR7265389 | embryo | 12hA | 7.37 | HC |
| SRR7265390 | embryo | 12hA | 6.00 | HC |
| SRR7265391 | embryo | 12hN | 8.56 | HC |
| SRR7265392 | embryo | 12hN | 6.84 | HC |
| SRR7265393 | embryo | 12hN | 6.83 | HC |
| SRR7265395 | embryo | 24hA | 5.70 | HC |
| SRR7265398 | embryo | 24hN | 5.82 | HC |
| SRR7265399 | embryo | 24hN | 4.90 | HC |
| SRR2338866 | endosprem | control | 6.33 | HC |
| SRR2338867 | endosprem | control | 4.04 | HC |
| SRR2338868 | endosprem | high_temperature | 6.62 | HC |
| SRR2338869 | endosprem | high_temperature | 9.07 | HC |
| SRR976168 | flag_leaf | wild_type | 5.16 | HC |
| SRR4457231 | flag_leaf | DAH4 | 11.75 | HC |
| SRR4457232 | flag_leaf | DAH4 | 15.22 | HC |
| SRR4457233 | flag_leaf | DAH4 | 16.51 | HC |
| SRR4457234 | flag_leaf | DAH12 | 7.43 | HC |
| SRR4457235 | flag_leaf | DAH12 | 7.38 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.28 | HC |
| SRR4457237 | flag_leaf | DAH20 | 4.88 | HC |
| SRR4457239 | flag_leaf | DAH20 | 4.62 | HC |
| SRR4457243 | flag_leaf | DAH36 | 12.19 | HC |
| SRR4457244 | flag_leaf | DAH36 | 9.18 | HC |
| SRR4457245 | flag_leaf | DAH36 | 10.49 | HC |
| SRR1213690 | flower | wt(flower buds) | 17.11 | HC |
| SRR1213691 | flower | wt | 20.02 | HC |
| SRR8060835 | leaf | wild_type | 6.91 | HC |
| SRR8060836 | leaf | wild_type | 10.49 | HC |
| SRR8060837 | leaf | wild_type | 8.17 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.65 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 6.26 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.65 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 6.26 | HC |
| SRR1761530 | leaf | control | 6.65 | HC |
| SRR1761531 | leaf | control | 6.26 | HC |
| SRR504365 | leaf | wt | 8.87 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 4.64 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 4.03 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.05 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.11 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.95 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.29 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.34 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.71 | HC |
| SRR1213692 | leaf | wt | 7.91 | HC |
| SRR1213693 | leaf | wt | 4.06 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 7.37 | HC |
| SRR5856927 | leaf | control | 7.82 | HC |
| SRR5856928 | leaf | control | 8.11 | HC |
| SRR5856929 | leaf | control | 7.71 | HC |
| SRR5856930 | leaf | salt | 3.23 | HC |
| SRR5856931 | leaf | salt | 4.35 | HC |
| SRR5856932 | leaf | salt | 2.47 | HC |
| SRR5856933 | leaf | control | 11.36 | HC |
| SRR5856934 | leaf | control | 8.61 | HC |
| SRR5856935 | leaf | control | 10.80 | HC |
| SRR5856936 | leaf | salt | 4.82 | HC |
| SRR5856937 | leaf | salt | 4.68 | HC |
| SRR5856938 | leaf | salt | 4.69 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 3.64 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.71 | HC |
| SRR8582888 | panicle | AM | 4.22 | HC |
| SRR8582889 | panicle | AM | 2.54 | HC |
| SRR8582890 | panicle | AM | 3.07 | HC |
| SRR8582892 | panicle | PM | 8.87 | HC |
| SRR8582893 | panicle | PM | 5.69 | HC |
| SRR5110429 | panicle | Dawn | 20.51 | HC |
| SRR5110430 | panicle | Dawn | 17.81 | HC |
| SRR5110431 | panicle | Dawn | 19.54 | HC |
| SRR5110432 | panicle | Dawn | 12.76 | HC |
| SRR4947496 | root | control | 7.70 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 11.81 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 12.61 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 12.78 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 12.57 | HC |
| SRR5110437 | panicle | Dawn + 7h | 10.47 | HC |
| SRR5110438 | panicle | Dawn + 7h | 12.57 | HC |
| SRR5110439 | panicle | Dawn + 7h | 11.85 | HC |
| SRR5110440 | panicle | Dawn + 7h | 19.87 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 11.08 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 12.32 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 10.95 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 20.73 | HC |
| SRR5110445 | panicle | Dusk | 13.00 | HC |
| SRR5110446 | panicle | Dusk | 14.02 | HC |
| SRR5110447 | panicle | Dusk | 12.48 | HC |
| SRR5110448 | panicle | Dusk | 19.51 | HC |
| SRR5110449 | panicle | Dawn + 14h | 17.54 | HC |
| SRR5110450 | panicle | Dawn + 14h | 15.49 | HC |
| SRR5110451 | panicle | Dawn + 14h | 15.30 | HC |
| SRR5110452 | panicle | Dawn + 14h | 18.39 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 12.90 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 10.10 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 14.00 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 20.90 | HC |
| SRR5110457 | panicle | Dawn + 21h | 11.29 | HC |
| SRR5110458 | panicle | Dawn + 21h | 11.56 | HC |
| SRR5110459 | panicle | Dawn + 21h | 14.76 | HC |
| SRR5110460 | panicle | Dawn + 21h | 25.44 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 5.87 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 4.41 | HC |
| SRR1633185 | panicle | WT | 6.44 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 31.22 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 33.03 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 30.28 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 34.23 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 33.23 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 25.42 | HC |
| SRR5126147 | root | "mock,1_day" | 5.88 | HC |
| SRR5126149 | root | "mock,1_day" | 8.33 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.32 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.29 | HC |
| SRR5126153 | root | "mock,7_days" | 5.74 | HC |
| SRR5126155 | root | "mock,7_days" | 6.20 | HC |
| SRR5126157 | root | "mock,7_days" | 20.83 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 6.40 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 10.06 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.68 | HC |
| SRR5126165 | root | "mock,14_days" | 5.67 | HC |
| SRR5126167 | root | "mock,14_days" | 7.66 | HC |
| SRR5126169 | root | "mock,14_days" | 9.65 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.64 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 8.68 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.96 | HC |
| SRR1213694 | root | wt | 9.28 | HC |
| SRR1213695 | root | wt | 5.96 | HC |
| SRR4947478 | root | control | 6.21 | HC |
| SRR4947479 | root | control | 5.37 | HC |
| SRR4947480 | root | control | 9.00 | HC |
| SRR4947481 | root | control | 11.58 | HC |
| SRR4947482 | root | Al | 7.97 | HC |
| SRR4947483 | root | Al | 5.41 | HC |
| SRR4947484 | root | Al | 5.98 | HC |
| SRR4947485 | root | Al | 7.76 | HC |
| SRR4947487 | root | control | 7.47 | HC |
| SRR4947488 | root | control | 9.92 | HC |
| SRR4947489 | root | control | 10.45 | HC |
| SRR4947490 | root | Al | 6.05 | HC |
| SRR4947491 | root | Al | 8.87 | HC |
| SRR4947492 | root | Al | 9.28 | HC |
| SRR4947493 | root | Al | 7.06 | HC |
| SRR4947494 | root | control | 8.45 | HC |
| SRR4947497 | root | control | 15.79 | HC |
| SRR4947498 | root | Al | 11.01 | HC |
| SRR4947499 | root | Al | 6.63 | HC |
| SRR4947500 | root | Al | 10.78 | HC |
| SRR4947501 | root | Al | 16.63 | HC |
| SRR4947502 | root | control | 18.64 | HC |
| SRR4947503 | root | control | 13.01 | HC |
| SRR4947504 | root | control | 15.57 | HC |
| SRR4947505 | root | control | 14.79 | HC |
| SRR4947506 | root | Al | 6.63 | HC |
| SRR4947507 | root | Al | 12.63 | HC |
| SRR4947508 | root | Al | 7.49 | HC |
| SRR4947509 | root | Al | 10.91 | HC |
| SRR6502091 | root | 100 mM NaCl | 9.29 | HC |
| SRR6502092 | root | 100 mM NaCl | 12.52 | HC |
| SRR6502093 | root | 100 mM NaCl | 16.62 | HC |
| SRR6502094 | root | control | 6.22 | HC |
| SRR6502095 | root | control | 6.22 | HC |
| SRR6502096 | root | control | 5.18 | HC |
| SRR6502103 | root | 100 mM NaCl | 13.58 | HC |
| SRR6502104 | root | 100 mM NaCl | 19.68 | HC |
| SRR6502105 | root | 100 mM NaCl | 14.57 | HC |
| SRR6502106 | root | control | 9.62 | HC |
| SRR6502107 | root | control | 9.23 | HC |
| SRR6502108 | root | control | 8.18 | HC |
| SRR2154086 | seedling | wt | 4.98 | HC |
| SRR2154082 | seedling | wt | 8.25 | HC |
| SRR2154084 | seedling | wt | 9.81 | HC |
| SRR2154085 | seedling | wt | 4.96 | HC |
| SRR2154087 | seedling | wt | 5.95 | HC |
| SRR2857719 | seedling | drought_stress_0h | 9.06 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.12 | HC |
| SRR2857721 | seedling | drought_stress_6h | 4.23 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.65 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.75 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.75 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 18.00 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 17.28 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 15.95 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 29.20 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 22.72 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 22.24 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 22.98 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 18.95 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 18.75 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 13.19 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 12.57 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 13.10 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 24.91 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 25.57 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 21.68 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 24.96 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 26.19 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 20.42 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 26.65 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 26.76 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 24.68 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 29.01 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 36.28 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 15.17 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 12.35 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.18 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 18.85 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 14.65 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 19.80 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 13.64 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 16.07 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 15.21 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 14.86 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 15.52 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 26.37 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 24.33 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 21.35 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 19.14 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 15.45 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 13.77 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 14.75 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 14.06 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 20.42 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 15.64 | HC |