| SRR4457251 | 2nd_leaf | DAH4 | 4.77 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 5.98 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 5.46 | HC |
| SRR358797 | callus | wt | 10.12 | HC |
| SRR358798 | callus | wt | 9.91 | HC |
| SRR6320473 | carpel | wt | 22.60 | HC |
| SRR6320498 | carpel | wt | 23.02 | HC |
| SRR5560727 | caryopsis | wild_type | 12.14 | HC |
| SRR5560728 | caryopsis | wild_type | 13.83 | HC |
| SRR5560729 | caryopsis | wild_type | 37.03 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.91 | HC |
| SRR7265400 | coleoptile | 2dA | 7.02 | HC |
| SRR7265401 | coleoptile | 2dA | 8.41 | HC |
| SRR7265402 | coleoptile | 2dA | 6.44 | HC |
| SRR7265403 | coleoptile | 2dN | 8.34 | HC |
| SRR7265404 | coleoptile | 2dN | 5.96 | HC |
| SRR7265405 | coleoptile | 2dN | 7.04 | HC |
| SRR7265406 | coleoptile | 3dA | 11.86 | HC |
| SRR7265407 | coleoptile | 3dA | 9.30 | HC |
| SRR7265408 | coleoptile | 3dA | 6.23 | HC |
| SRR7265409 | coleoptile | 3dN | 6.57 | HC |
| SRR7265410 | coleoptile | 3dN | 5.61 | HC |
| SRR7265411 | coleoptile | 3dN | 4.14 | HC |
| SRR7265412 | coleoptile | 4dA | 9.21 | HC |
| SRR7265413 | coleoptile | 4dA | 9.75 | HC |
| SRR7265414 | coleoptile | 4dA | 10.62 | HC |
| SRR7265415 | coleoptile | 4dN | 5.65 | HC |
| SRR7265416 | coleoptile | 4dN | 7.05 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 10.87 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 10.02 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 7.39 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.56 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.62 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.59 | HC |
| SRR7265373 | embryo | dry seed 0 h | 8.18 | HC |
| SRR7265374 | embryo | dry seed 0 h | 8.79 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.40 | HC |
| SRR7265376 | embryo | 1hA | 7.95 | HC |
| SRR7265377 | embryo | 1hA | 8.88 | HC |
| SRR7265378 | embryo | 1hA | 8.72 | HC |
| SRR7265379 | embryo | 1hN | 8.45 | HC |
| SRR7265380 | embryo | 1hN | 7.19 | HC |
| SRR7265381 | embryo | 1hN | 7.30 | HC |
| SRR7265382 | embryo | 3hA | 13.80 | HC |
| SRR7265383 | embryo | 3hA | 11.16 | HC |
| SRR7265384 | embryo | 3hA | 13.06 | HC |
| SRR7265385 | embryo | 3hN | 9.88 | HC |
| SRR7265386 | embryo | 3hN | 7.79 | HC |
| SRR7265387 | embryo | 3hN | 8.83 | HC |
| SRR7265388 | embryo | 12hA | 12.28 | HC |
| SRR7265389 | embryo | 12hA | 9.35 | HC |
| SRR7265390 | embryo | 12hA | 13.64 | HC |
| SRR7265391 | embryo | 12hN | 8.41 | HC |
| SRR7265392 | embryo | 12hN | 7.54 | HC |
| SRR7265393 | embryo | 12hN | 7.24 | HC |
| SRR7265394 | embryo | 24hA | 8.61 | HC |
| SRR7265395 | embryo | 24hA | 7.86 | HC |
| SRR7265396 | embryo | 24hA | 6.52 | HC |
| SRR7265397 | embryo | 24hN | 10.47 | HC |
| SRR7265398 | embryo | 24hN | 8.75 | HC |
| SRR7265399 | embryo | 24hN | 9.90 | HC |
| SRR2338866 | endosprem | control | 12.30 | HC |
| SRR2338868 | endosprem | high_temperature | 3.74 | HC |
| SRR2338869 | endosprem | high_temperature | 4.84 | HC |
| SRR976168 | flag_leaf | wild_type | 5.26 | HC |
| SRR1213690 | flower | wt(flower buds) | 6.72 | HC |
| SRR1213691 | flower | wt | 5.77 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.01 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.64 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 10.55 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 14.24 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.00 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.72 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.16 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 12.02 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.04 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 12.58 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.97 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.93 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 14.76 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.07 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 15.98 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 11.53 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.05 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.69 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.34 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.53 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 12.99 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.19 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.86 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.40 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.97 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.19 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.40 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.24 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 46.35 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 38.93 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 46.35 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 38.93 | HC |
| SRR1761528 | leaf | drought | 46.34 | HC |
| SRR1761529 | leaf | drought | 38.93 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 15.30 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 23.52 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 8.96 | HC |
| SRR6417968 | leaf | H2O_control | 3.89 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 9.89 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 8.83 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 13.26 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 14.96 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 9.21 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 6.54 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 6.07 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 6.64 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 5.64 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.27 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.85 | HC |
| SRR1213692 | leaf | wt | 7.50 | HC |
| SRR1213693 | leaf | wt | 5.34 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 12.66 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.62 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 6.60 | HC |
| SRR6502088 | leaf | control | 4.26 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 4.90 | HC |
| SRR5856927 | leaf | control | 5.23 | HC |
| SRR5856928 | leaf | control | 6.97 | HC |
| SRR5856929 | leaf | control | 7.40 | HC |
| SRR5856930 | leaf | salt | 5.55 | HC |
| SRR5856931 | leaf | salt | 7.57 | HC |
| SRR5856932 | leaf | salt | 7.48 | HC |
| SRR5856933 | leaf | control | 6.52 | HC |
| SRR5856934 | leaf | control | 6.27 | HC |
| SRR5856935 | leaf | control | 6.99 | HC |
| SRR5856936 | leaf | salt | 6.61 | HC |
| SRR5856937 | leaf | salt | 5.40 | HC |
| SRR5856938 | leaf | salt | 7.40 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 13.42 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 8.83 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 32.68 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 27.31 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 24.25 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 10.98 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 12.48 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 14.34 | HC |
| SRR6168975 | leaf | none (control) | 5.38 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 25.59 | HC |
| SRR6168979 | leaf | none (control) | 19.15 | HC |
| SRR6168980 | leaf | none (control) | 9.52 | HC |
| SRR6168981 | leaf | none (control) | 11.93 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 23.26 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 22.33 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 29.67 | HC |
| SRR5110429 | panicle | Dawn | 5.49 | HC |
| SRR5110430 | panicle | Dawn | 5.96 | HC |
| SRR5110431 | panicle | Dawn | 8.57 | HC |
| SRR5110432 | panicle | Dawn | 6.13 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 7.03 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 5.11 | HC |
| SRR5110437 | panicle | Dawn + 7h | 7.08 | HC |
| SRR5110438 | panicle | Dawn + 7h | 5.17 | HC |
| SRR5110439 | panicle | Dawn + 7h | 5.69 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.56 | HC |
| SRR5110445 | panicle | Dusk | 5.38 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.99 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 5.09 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.26 | HC |
| SRR5110460 | panicle | Dawn + 21h | 5.71 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.69 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 12.91 | HC |
| SRR1633182 | panicle | WT | 10.76 | HC |
| SRR1633185 | panicle | WT | 15.38 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 18.68 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 22.19 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 15.67 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 15.45 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.69 | HC |
| SRR5126147 | root | "mock,1_day" | 4.32 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.41 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 6.23 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.90 | HC |
| SRR5126155 | root | "mock,7_days" | 4.97 | HC |
| SRR5126157 | root | "mock,7_days" | 8.77 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 11.01 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 12.95 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.99 | HC |
| SRR5126165 | root | "mock,14_days" | 5.60 | HC |
| SRR5126167 | root | "mock,14_days" | 11.63 | HC |
| SRR5126169 | root | "mock,14_days" | 5.32 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.68 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 13.24 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.30 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.60 | HC |
| SRR1213694 | root | wt | 12.51 | HC |
| SRR1213695 | root | wt | 7.85 | HC |
| SRR4947480 | root | control | 5.29 | HC |
| SRR4947488 | root | control | 5.44 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.89 | HC |
| SRR6502093 | root | 100 mM NaCl | 8.55 | HC |
| SRR6502095 | root | control | 5.49 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.84 | HC |
| SRR1740434 | root_differentiation_zone | wt | 12.99 | HC |
| SRR6441555 | seedling | wild_type | 3.80 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.70 | HC |
| SRR2857720 | seedling | drought_stress_1h | 14.37 | HC |
| SRR2857721 | seedling | drought_stress_6h | 59.20 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 8.04 | HC |
| SRR358793 | seedling | wt | 11.82 | HC |
| SRR358794 | seedling | wt | 10.23 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.66 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.14 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 3.51 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.98 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.81 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.53 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.75 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 13.19 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 14.64 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 7.98 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 13.19 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 8.58 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 7.96 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 9.60 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 4.75 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 5.32 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.14 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.00 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 5.24 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 3.80 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 3.96 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 3.88 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.16 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 3.60 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.50 | HC |