| SRR3745125 | anther | wt | 8.34 | HC |
| SRR3745126 | anther | wt | 6.81 | HC |
| SRR5560729 | caryopsis | wild_type | 6.77 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.12 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.78 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.83 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.10 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.39 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 7.53 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.16 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 6.57 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 4.18 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 8.80 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.83 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 7.93 | HC |
| SRR1213690 | flower | wt(flower buds) | 3.82 | HC |
| SRR1213691 | flower | wt | 6.24 | HC |
| SRR8060835 | leaf | wild_type | 3.09 | HC |
| SRR8060836 | leaf | wild_type | 5.65 | HC |
| SRR8060837 | leaf | wild_type | 4.00 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.98 | HC |
| SRR6502090 | leaf | control | 5.26 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 6.02 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.37 | HC |
| SRR6168973 | leaf | none (control) | 6.16 | HC |
| SRR8582893 | panicle | PM | 5.23 | HC |
| SRR5110446 | panicle | Dusk | 4.53 | HC |
| SRR5110447 | panicle | Dusk | 4.54 | HC |
| SRR5110448 | panicle | Dusk | 6.50 | HC |
| SRR5110452 | panicle | Dawn + 14h | 5.70 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.51 | HC |
| SRR1633182 | panicle | WT | 16.66 | HC |
| SRR1633185 | panicle | WT | 25.12 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.44 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 10.33 | HC |
| SRR4947503 | root | control | 4.95 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.70 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.96 | HC |
| SRR1740433 | root_elongation_zone | wt | 3.66 | HC |
| SRR2154082 | seedling | wt | 4.03 | HC |
| SRR2154083 | seedling | wt | 5.25 | HC |
| SRR3098741 | seedling | wt | 2.90 | HC |
| SRR3098742 | seedling | wt | 3.16 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.57 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 15.49 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.12 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.53 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.02 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.66 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.59 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 7.93 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 8.96 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.40 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 12.55 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.28 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 10.45 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 13.60 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 11.42 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 14.61 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 14.16 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 11.38 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 10.49 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 11.07 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 8.61 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 10.42 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 16.03 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 15.63 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 12.77 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 13.86 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 16.72 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 14.25 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 15.88 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 13.95 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 15.82 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 14.62 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 20.84 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 9.58 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 7.50 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 5.60 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 11.53 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 9.22 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 12.30 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.54 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 9.66 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 9.63 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.80 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 4.32 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.14 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.47 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.76 | HC |