| SRR358795 | callus | wt | 21.07 | HC |
| SRR358796 | callus | wt | 22.93 | HC |
| SRR358797 | callus | wt | 19.30 | HC |
| SRR358798 | callus | wt | 24.47 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 22.97 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 700.51 | HC |
| SRR7265376 | embryo | 1hA | 4.73 | HC |
| SRR7265378 | embryo | 1hA | 5.63 | HC |
| SRR7265381 | embryo | 1hN | 3.63 | HC |
| SRR7265382 | embryo | 3hA | 12.95 | HC |
| SRR7265383 | embryo | 3hA | 6.82 | HC |
| SRR7265384 | embryo | 3hA | 11.57 | HC |
| SRR7265385 | embryo | 3hN | 4.73 | HC |
| SRR7265386 | embryo | 3hN | 5.00 | HC |
| SRR7265387 | embryo | 3hN | 3.78 | HC |
| SRR2338866 | endosprem | control | 30.22 | HC |
| SRR2338867 | endosprem | control | 33.17 | HC |
| SRR2338868 | endosprem | high_temperature | 17.20 | HC |
| SRR2338869 | endosprem | high_temperature | 18.70 | HC |
| SRR1213690 | flower | wt(flower buds) | 10.49 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.11 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.28 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.90 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.34 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 13.86 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.20 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.48 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.70 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.26 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.67 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.05 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.68 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 14.27 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.52 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 14.43 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.42 | HC |
| SRR1761528 | leaf | drought | 14.34 | HC |
| SRR1761529 | leaf | drought | 7.49 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 9.90 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 7.76 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.17 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.44 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 9.02 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 12.07 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 14.87 | HC |
| SRR6168973 | leaf | none (control) | 4.57 | HC |
| SRR6168974 | leaf | none (control) | 12.70 | HC |
| SRR6168975 | leaf | none (control) | 22.07 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 82.18 | HC |
| SRR6168979 | leaf | none (control) | 24.92 | HC |
| SRR6168980 | leaf | none (control) | 25.59 | HC |
| SRR6168981 | leaf | none (control) | 5.13 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 7.02 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 17.22 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 6.32 | HC |
| SRR4947496 | root | control | 33.47 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 10.18 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 45.78 | HC |
| SRR5126147 | root | "mock,1_day" | 17.96 | HC |
| SRR5126148 | root | "mock,1_day" | 7.79 | HC |
| SRR5126149 | root | "mock,1_day" | 10.42 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 10.81 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 10.49 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 7.98 | HC |
| SRR5126155 | root | "mock,7_days" | 11.08 | HC |
| SRR5126157 | root | "mock,7_days" | 8.80 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.10 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.62 | HC |
| SRR5126165 | root | "mock,14_days" | 22.01 | HC |
| SRR5126167 | root | "mock,14_days" | 13.45 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 17.85 | HC |
| SRR1213694 | root | wt | 7.16 | HC |
| SRR4947480 | root | control | 30.30 | HC |
| SRR4947481 | root | control | 32.36 | HC |
| SRR4947484 | root | Al | 19.02 | HC |
| SRR4947485 | root | Al | 19.11 | HC |
| SRR4947488 | root | control | 14.65 | HC |
| SRR4947489 | root | control | 19.56 | HC |
| SRR4947492 | root | Al | 21.54 | HC |
| SRR4947493 | root | Al | 18.56 | HC |
| SRR4947497 | root | control | 6.61 | HC |
| SRR4947500 | root | Al | 17.19 | HC |
| SRR4947504 | root | control | 26.29 | HC |
| SRR4947505 | root | control | 20.54 | HC |
| SRR4947508 | root | Al | 21.68 | HC |
| SRR4947509 | root | Al | 32.31 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.09 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.71 | HC |
| SRR6502093 | root | 100 mM NaCl | 6.25 | HC |
| SRR6502094 | root | control | 11.12 | HC |
| SRR6502095 | root | control | 7.39 | HC |
| SRR6502096 | root | control | 12.69 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.98 | HC |
| SRR6502106 | root | control | 6.43 | HC |
| SRR6502107 | root | control | 8.77 | HC |
| SRR6502108 | root | control | 6.97 | HC |
| SRR2154085 | seedling | wt | 5.87 | HC |
| SRR2154087 | seedling | wt | 4.97 | HC |
| SRR2857719 | seedling | drought_stress_0h | 17.09 | HC |
| SRR2857720 | seedling | drought_stress_1h | 12.73 | HC |
| SRR2857721 | seedling | drought_stress_6h | 28.34 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 9.41 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.95 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 5.39 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 9.04 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 16.14 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.12 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.32 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 6.80 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 5.55 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.71 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 6.01 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.29 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 6.60 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 18.32 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 16.60 | HC |