| SRR4457249 | 2nd_leaf | DAH4 | 22.73 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 14.49 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 17.98 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 15.94 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 13.98 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 12.20 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 17.52 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 23.94 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 15.88 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 25.46 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 24.26 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 37.73 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 24.48 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 15.58 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 10.72 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 38.67 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 54.17 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 41.55 | HC |
| SRR5560727 | caryopsis | wild_type | 23.23 | HC |
| SRR5560728 | caryopsis | wild_type | 16.15 | HC |
| SRR5560729 | caryopsis | wild_type | 9.45 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 7.61 | HC |
| SRR7265376 | embryo | 1hA | 4.46 | HC |
| SRR7265379 | embryo | 1hN | 3.67 | HC |
| SRR7265380 | embryo | 1hN | 4.46 | HC |
| SRR7265381 | embryo | 1hN | 4.63 | HC |
| SRR7265386 | embryo | 3hN | 3.58 | HC |
| SRR7265387 | embryo | 3hN | 3.86 | HC |
| SRR4457231 | flag_leaf | DAH4 | 13.59 | HC |
| SRR4457232 | flag_leaf | DAH4 | 14.93 | HC |
| SRR4457233 | flag_leaf | DAH4 | 12.62 | HC |
| SRR4457234 | flag_leaf | DAH12 | 7.00 | HC |
| SRR4457235 | flag_leaf | DAH12 | 16.14 | HC |
| SRR4457236 | flag_leaf | DAH12 | 10.32 | HC |
| SRR4457237 | flag_leaf | DAH20 | 25.55 | HC |
| SRR4457238 | flag_leaf | DAH20 | 24.67 | HC |
| SRR4457239 | flag_leaf | DAH20 | 23.62 | HC |
| SRR4457240 | flag_leaf | DAH28 | 45.81 | HC |
| SRR4457241 | flag_leaf | DAH28 | 29.41 | HC |
| SRR4457242 | flag_leaf | DAH28 | 20.44 | HC |
| SRR4457243 | flag_leaf | DAH36 | 10.99 | HC |
| SRR4457244 | flag_leaf | DAH36 | 6.49 | HC |
| SRR4457245 | flag_leaf | DAH36 | 7.53 | HC |
| SRR4457246 | flag_leaf | DAH44 | 32.60 | HC |
| SRR4457247 | flag_leaf | DAH44 | 31.79 | HC |
| SRR4457248 | flag_leaf | DAH44 | 33.96 | HC |
| SRR1213690 | flower | wt(flower buds) | 5.07 | HC |
| SRR1213691 | flower | wt | 4.44 | HC |
| SRR8240824 | leaf | wild_type | 3.97 | HC |
| SRR8240825 | leaf | wild_type | 6.03 | HC |
| SRR8240826 | leaf | wild_type | 5.46 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.68 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.09 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.30 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.30 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 11.23 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.14 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.53 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.58 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.22 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 10.83 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.80 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.90 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.54 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 6.49 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 7.15 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 8.04 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.35 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.40 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 12.30 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.60 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 6.27 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 11.53 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.34 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.30 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.86 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.55 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.64 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.38 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.36 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.89 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 9.96 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.56 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 8.81 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 9.20 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 9.15 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 6.06 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 9.20 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 9.15 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 6.06 | HC |
| SRR1761528 | leaf | drought | 9.20 | HC |
| SRR1761529 | leaf | drought | 9.15 | HC |
| SRR1761530 | leaf | control | 6.06 | HC |
| SRR504365 | leaf | wt | 32.69 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.05 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.41 | HC |
| SRR6417967 | leaf | H2O_control | 6.04 | HC |
| SRR6417968 | leaf | H2O_control | 4.44 | HC |
| SRR6417969 | leaf | H2O_control | 10.20 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.61 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.85 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 9.00 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 9.05 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 17.96 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 7.99 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 6.47 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 4.30 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 12.85 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.88 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 9.50 | HC |
| SRR8611900 | leaf | Non-inoculated | 8.70 | HC |
| SRR8611901 | leaf | Non-inoculated | 9.79 | HC |
| SRR8611902 | leaf | Non-inoculated | 12.14 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 33.08 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 31.25 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 30.27 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 4.43 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 4.56 | HC |
| SRR1213692 | leaf | wt | 25.89 | HC |
| SRR1213693 | leaf | wt | 39.10 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.03 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 7.19 | HC |
| SRR6168973 | leaf | none (control) | 47.39 | HC |
| SRR6168974 | leaf | none (control) | 45.30 | HC |
| SRR6168975 | leaf | none (control) | 66.60 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 24.91 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 4.31 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 26.44 | HC |
| SRR6168979 | leaf | none (control) | 9.98 | HC |
| SRR6168980 | leaf | none (control) | 13.64 | HC |
| SRR6168981 | leaf | none (control) | 28.83 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 10.40 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 10.18 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 27.02 | HC |
| SRR8582889 | panicle | AM | 1.97 | HC |
| SRR8582891 | panicle | PM | 12.28 | HC |
| SRR8582892 | panicle | PM | 9.48 | HC |
| SRR8582893 | panicle | PM | 11.54 | HC |
| SRR4947496 | root | control | 7.45 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 2.81 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.11 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 4.70 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 5.61 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 9.47 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 15.92 | HC |
| SRR5126157 | root | "mock,7_days" | 6.60 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.11 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 6.07 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 6.31 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.23 | HC |
| SRR1213695 | root | wt | 46.10 | HC |
| SRR4947480 | root | control | 5.84 | HC |
| SRR4947488 | root | control | 5.40 | HC |
| SRR4947489 | root | control | 6.52 | HC |
| SRR6502092 | root | 100 mM NaCl | 5.27 | HC |
| SRR6441554 | seedling | wild_type | 4.00 | HC |
| SRR6441555 | seedling | wild_type | 4.35 | HC |
| SRR2154086 | seedling | wt | 6.76 | HC |
| SRR2154085 | seedling | wt | 8.30 | HC |
| SRR2154087 | seedling | wt | 6.39 | HC |
| SRR3098741 | seedling | wt | 3.20 | HC |
| SRR3098743 | seedling | wt | 3.34 | HC |
| SRR1944582 | seedling | "with_chilling_teatment_(4C,33h)" | 19.52 | HC |
| SRR1944583 | seedling | no_treatment | 6.46 | HC |
| SRR358791 | seedling | wt | 11.31 | HC |
| SRR358792 | seedling | wt | 13.71 | HC |
| SRR358793 | seedling | wt | 14.00 | HC |
| SRR358794 | seedling | wt | 14.63 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.81 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 6.77 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.27 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 11.82 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 8.55 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 12.78 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 10.20 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 7.57 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 35.40 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 27.47 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 53.80 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 47.26 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 51.95 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 19.93 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 32.88 | HC |
| SRR3950255 | shoot | No_DIS;_mock_inoculated | 38.83 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 3.41 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.71 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 6.98 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.39 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 9.77 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.94 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 2.87 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.29 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.26 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.00 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 6.93 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.14 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 13.01 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 8.93 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 8.43 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 9.69 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 11.16 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 9.39 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 12.32 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 23.06 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 21.98 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 23.46 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 12.21 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 11.36 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 12.88 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 7.70 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 11.27 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 8.16 | HC |