| SRR5560729 | caryopsis | wild_type | 9.42 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 8.21 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 9.07 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 6.44 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.70 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 9.85 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 5.35 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 9.25 | HC |
| SRR8240826 | leaf | wild_type | 2.66 | HC |
| SRR8240818 | leaf | wild_type | 3.03 | HC |
| SRR8240820 | leaf | wild_type | 3.03 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 10.70 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.46 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.71 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 11.84 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 7.67 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 6.79 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.95 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.78 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.01 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.96 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.34 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.72 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 4.13 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 4.45 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 14.16 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 10.62 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 14.16 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 10.62 | HC |
| SRR1761528 | leaf | drought | 14.16 | HC |
| SRR1761529 | leaf | drought | 10.62 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 19.81 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 15.83 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 14.42 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 10.21 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 15.19 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 12.58 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.86 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.20 | HC |
| SRR1213693 | leaf | wt | 4.08 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 7.62 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.40 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 7.86 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 7.55 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 4.90 | HC |
| SRR6502100 | leaf | control | 5.20 | HC |
| SRR6502101 | leaf | control | 4.94 | HC |
| SRR6502102 | leaf | control | 5.33 | HC |
| SRR6168973 | leaf | none (control) | 7.65 | HC |
| SRR6168974 | leaf | none (control) | 8.52 | HC |
| SRR6168979 | leaf | none (control) | 4.64 | HC |
| SRR6168980 | leaf | none (control) | 5.33 | HC |
| SRR6168981 | leaf | none (control) | 7.55 | HC |
| SRR8582888 | panicle | AM | 3.25 | HC |
| SRR8582889 | panicle | AM | 1.82 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 11.48 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 10.79 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.53 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.09 | HC |
| SRR5126147 | root | "mock,1_day" | 6.61 | HC |
| SRR5126148 | root | "mock,1_day" | 6.44 | HC |
| SRR5126149 | root | "mock,1_day" | 5.04 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 10.21 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 7.78 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 10.03 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 5.34 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.52 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.70 | HC |
| SRR5126167 | root | "mock,14_days" | 4.89 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 5.57 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 7.94 | HC |
| SRR6502091 | root | 100 mM NaCl | 7.93 | HC |
| SRR6502092 | root | 100 mM NaCl | 8.27 | HC |
| SRR6502093 | root | 100 mM NaCl | 9.19 | HC |
| SRR6502094 | root | control | 7.56 | HC |
| SRR6502095 | root | control | 8.28 | HC |
| SRR6502096 | root | control | 7.70 | HC |
| SRR6502103 | root | 100 mM NaCl | 9.24 | HC |
| SRR6502104 | root | 100 mM NaCl | 11.60 | HC |
| SRR6502105 | root | 100 mM NaCl | 11.05 | HC |
| SRR6502106 | root | control | 5.93 | HC |
| SRR6502107 | root | control | 8.37 | HC |
| SRR6502108 | root | control | 7.24 | HC |
| SRR1740435 | root_differentiation_zone | wt | 4.89 | HC |
| SRR1740436 | root_differentiation_zone | wt | 4.03 | HC |
| SRR2154086 | seedling | wt | 5.45 | HC |
| SRR2154085 | seedling | wt | 8.33 | HC |
| SRR3098741 | seedling | wt | 3.08 | HC |
| SRR3098742 | seedling | wt | 4.22 | HC |
| SRR3098743 | seedling | wt | 2.99 | HC |
| SRR2857721 | seedling | drought_stress_6h | 33.40 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 3.97 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.58 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 8.31 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 5.66 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.80 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.91 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.74 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.34 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 6.60 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.48 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.35 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.60 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.69 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 5.09 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.92 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 5.43 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 8.97 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 9.19 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 16.48 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 17.79 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 8.11 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 7.73 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.31 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 11.78 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 11.89 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 11.09 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.83 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 4.23 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 8.43 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 7.74 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 11.09 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 8.39 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 9.12 | HC |