| SRR4457249 | 2nd_leaf | DAH4 | 6.90 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 8.27 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 7.20 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 10.04 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 10.60 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 9.65 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 8.73 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 9.40 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 9.84 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 7.37 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 5.56 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 5.55 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 11.66 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 9.41 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 6.55 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 6.17 | HC |
| SRR3745125 | anther | wt | 29.05 | HC |
| SRR3745126 | anther | wt | 21.70 | HC |
| SRR3745127 | anther | wt | 18.11 | HC |
| SRR5560727 | caryopsis | wild_type | 5.78 | HC |
| SRR5560728 | caryopsis | wild_type | 7.77 | HC |
| SRR5560729 | caryopsis | wild_type | 12.41 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.49 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 8.02 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 7.30 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 6.57 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 6.04 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 5.30 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.22 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 5.06 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 7.68 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 6.74 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.89 | HC |
| SRR2338866 | endosprem | control | 5.11 | HC |
| SRR2338868 | endosprem | high_temperature | 4.00 | HC |
| SRR2338869 | endosprem | high_temperature | 5.32 | HC |
| SRR4457231 | flag_leaf | DAH4 | 6.85 | HC |
| SRR4457232 | flag_leaf | DAH4 | 8.21 | HC |
| SRR4457233 | flag_leaf | DAH4 | 8.32 | HC |
| SRR4457234 | flag_leaf | DAH12 | 7.47 | HC |
| SRR4457235 | flag_leaf | DAH12 | 12.79 | HC |
| SRR4457236 | flag_leaf | DAH12 | 12.97 | HC |
| SRR4457237 | flag_leaf | DAH20 | 11.25 | HC |
| SRR4457238 | flag_leaf | DAH20 | 10.22 | HC |
| SRR4457239 | flag_leaf | DAH20 | 12.78 | HC |
| SRR4457240 | flag_leaf | DAH28 | 5.55 | HC |
| SRR4457241 | flag_leaf | DAH28 | 8.09 | HC |
| SRR4457242 | flag_leaf | DAH28 | 5.97 | HC |
| SRR4457243 | flag_leaf | DAH36 | 7.98 | HC |
| SRR4457244 | flag_leaf | DAH36 | 8.99 | HC |
| SRR4457245 | flag_leaf | DAH36 | 11.61 | HC |
| SRR4457246 | flag_leaf | DAH44 | 5.22 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.04 | HC |
| SRR1213691 | flower | wt | 13.78 | HC |
| SRR8060836 | leaf | wild_type | 4.23 | HC |
| SRR8060837 | leaf | wild_type | 3.10 | HC |
| SRR8240818 | leaf | wild_type | 2.60 | HC |
| SRR8240820 | leaf | wild_type | 2.63 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.31 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.93 | HC |
| SRR2922622 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 11.66 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.34 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.48 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 10.29 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.65 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.07 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.29 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.89 | HC |
| SRR1952784 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.21 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.00 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 7.96 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.26 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.78 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 9.17 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 9.27 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 8.26 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 8.59 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 11.60 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.28 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.81 | HC |
| SRR1952796 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 10.96 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.86 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.89 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.58 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.23 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 12.12 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 11.59 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.78 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.11 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 9.59 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 7.94 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 11.07 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.11 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 9.75 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 6.93 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 7.21 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 10.75 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 10.98 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 6.92 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 7.21 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 10.77 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 10.98 | HC |
| SRR1761528 | leaf | drought | 6.91 | HC |
| SRR1761529 | leaf | drought | 7.21 | HC |
| SRR1761530 | leaf | control | 10.77 | HC |
| SRR1761531 | leaf | control | 11.00 | HC |
| SRR504365 | leaf | wt | 9.20 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.15 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.90 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.02 | HC |
| SRR6417967 | leaf | H2O_control | 5.49 | HC |
| SRR6417968 | leaf | H2O_control | 5.97 | HC |
| SRR6417969 | leaf | H2O_control | 4.40 | HC |
| SRR3209769 | leaf | Watered;Long_Day | 14.31 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 10.93 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 5.02 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 5.00 | HC |
| SRR3209773 | leaf | Watered;Short_Day | 5.35 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 5.21 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 9.38 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 8.38 | HC |
| SRR3209777 | leaf | Watered;Long_Day | 5.80 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 5.14 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 8.16 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 5.92 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.94 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.68 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.00 | HC |
| SRR1213692 | leaf | wt | 8.67 | HC |
| SRR1213693 | leaf | wt | 6.74 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.97 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 5.59 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 6.24 | HC |
| SRR6502088 | leaf | control | 7.19 | HC |
| SRR6502089 | leaf | control | 5.01 | HC |
| SRR6502090 | leaf | control | 5.26 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 9.69 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 11.33 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 7.36 | HC |
| SRR6502100 | leaf | control | 5.58 | HC |
| SRR6502101 | leaf | control | 5.90 | HC |
| SRR6502102 | leaf | control | 5.64 | HC |
| SRR5856929 | leaf | control | 2.20 | HC |
| SRR5856936 | leaf | salt | 1.94 | HC |
| SRR8582888 | panicle | AM | 5.09 | HC |
| SRR8582889 | panicle | AM | 2.93 | HC |
| SRR8582890 | panicle | AM | 4.95 | HC |
| SRR8582893 | panicle | PM | 6.33 | HC |
| SRR5110429 | panicle | Dawn | 10.63 | HC |
| SRR5110430 | panicle | Dawn | 8.64 | HC |
| SRR5110431 | panicle | Dawn | 9.31 | HC |
| SRR5110432 | panicle | Dawn | 5.40 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 6.25 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 6.78 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 4.71 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.60 | HC |
| SRR5110438 | panicle | Dawn + 7h | 6.20 | HC |
| SRR5110439 | panicle | Dawn + 7h | 8.24 | HC |
| SRR5110440 | panicle | Dawn + 7h | 7.19 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 7.42 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 6.19 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 4.73 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 8.62 | HC |
| SRR5110445 | panicle | Dusk | 6.18 | HC |
| SRR5110446 | panicle | Dusk | 6.99 | HC |
| SRR5110448 | panicle | Dusk | 6.60 | HC |
| SRR5110449 | panicle | Dawn + 14h | 9.84 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.42 | HC |
| SRR5110451 | panicle | Dawn + 14h | 6.75 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.61 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 5.59 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 6.57 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 7.56 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 7.00 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.97 | HC |
| SRR5110458 | panicle | Dawn + 21h | 8.40 | HC |
| SRR5110459 | panicle | Dawn + 21h | 6.26 | HC |
| SRR5110460 | panicle | Dawn + 21h | 13.57 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.21 | HC |
| SRR1633185 | panicle | WT | 7.16 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 5.20 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.49 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.19 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 12.70 | HC |
| SRR5126147 | root | "mock,1_day" | 5.90 | HC |
| SRR5126148 | root | "mock,1_day" | 4.16 | HC |
| SRR5126149 | root | "mock,1_day" | 6.61 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 6.83 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 4.96 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.08 | HC |
| SRR5126155 | root | "mock,7_days" | 5.11 | HC |
| SRR5126157 | root | "mock,7_days" | 6.56 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 5.72 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 7.01 | HC |
| SRR5126169 | root | "mock,14_days" | 4.68 | HC |
| SRR1213694 | root | wt | 3.42 | HC |
| SRR1213695 | root | wt | 8.25 | HC |
| SRR6502091 | root | 100 mM NaCl | 8.33 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.51 | HC |
| SRR6502094 | root | control | 6.28 | HC |
| SRR6502095 | root | control | 5.46 | HC |
| SRR6502096 | root | control | 5.26 | HC |
| SRR6502103 | root | 100 mM NaCl | 6.12 | HC |
| SRR6502104 | root | 100 mM NaCl | 10.14 | HC |
| SRR6502105 | root | 100 mM NaCl | 9.59 | HC |
| SRR6502106 | root | control | 7.84 | HC |
| SRR6502107 | root | control | 8.07 | HC |
| SRR6502108 | root | control | 5.53 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.42 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.47 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.14 | HC |
| SRR6441554 | seedling | wild_type | 3.20 | HC |
| SRR6441555 | seedling | wild_type | 5.12 | HC |
| SRR2154086 | seedling | wt | 6.67 | HC |
| SRR2154083 | seedling | wt | 4.16 | HC |
| SRR2154085 | seedling | wt | 5.73 | HC |
| SRR2154087 | seedling | wt | 6.36 | HC |
| SRR3098741 | seedling | wt | 4.69 | HC |
| SRR3098742 | seedling | wt | 4.28 | HC |
| SRR3098743 | seedling | wt | 4.57 | HC |
| SRR2857720 | seedling | drought_stress_1h | 5.02 | HC |
| SRR2857721 | seedling | drought_stress_6h | 3.50 | HC |
| SRR1944583 | seedling | no_treatment | 6.42 | HC |
| SRR4841740 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 7.28 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.56 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.00 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 4.71 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 6.41 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.21 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 5.77 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.68 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.84 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.61 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.70 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 7.24 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.45 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 8.09 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 5.30 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 6.44 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.97 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.94 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.76 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.35 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 5.56 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 7.87 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.32 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 8.99 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 5.15 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 5.56 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 9.59 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.48 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 9.33 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 8.45 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 7.88 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 13.43 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 8.70 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 6.00 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 9.04 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 8.31 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 9.31 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 9.31 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 8.68 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 7.49 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 6.60 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 7.23 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 11.62 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 10.40 | HC |