| SRR358795 | callus | wt | 10.39 | HC |
| SRR358797 | callus | wt | 10.06 | HC |
| SRR358798 | callus | wt | 12.30 | HC |
| SRR6320473 | carpel | wt | 25.97 | HC |
| SRR6320498 | carpel | wt | 26.95 | HC |
| SRR5560727 | caryopsis | wild_type | 5.20 | HC |
| SRR7265400 | coleoptile | 2dA | 4.68 | HC |
| SRR7265401 | coleoptile | 2dA | 5.08 | HC |
| SRR7265402 | coleoptile | 2dA | 4.99 | HC |
| SRR7265403 | coleoptile | 2dN | 9.14 | HC |
| SRR7265404 | coleoptile | 2dN | 7.83 | HC |
| SRR7265405 | coleoptile | 2dN | 8.65 | HC |
| SRR7265406 | coleoptile | 3dA | 5.39 | HC |
| SRR7265407 | coleoptile | 3dA | 5.16 | HC |
| SRR7265409 | coleoptile | 3dN | 6.39 | HC |
| SRR7265410 | coleoptile | 3dN | 4.70 | HC |
| SRR7265411 | coleoptile | 3dN | 5.41 | HC |
| SRR7265412 | coleoptile | 4dA | 3.57 | HC |
| SRR7265413 | coleoptile | 4dA | 6.07 | HC |
| SRR7265414 | coleoptile | 4dA | 4.29 | HC |
| SRR7265415 | coleoptile | 4dN | 5.35 | HC |
| SRR7265417 | coleoptile | 4dN | 4.48 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 6.02 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 4.89 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 5.32 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 4.92 | HC |
| SRR7265373 | embryo | dry seed 0 h | 9.66 | HC |
| SRR7265374 | embryo | dry seed 0 h | 10.01 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.71 | HC |
| SRR7265376 | embryo | 1hA | 8.58 | HC |
| SRR7265377 | embryo | 1hA | 7.76 | HC |
| SRR7265378 | embryo | 1hA | 9.19 | HC |
| SRR7265379 | embryo | 1hN | 8.55 | HC |
| SRR7265380 | embryo | 1hN | 7.71 | HC |
| SRR7265381 | embryo | 1hN | 7.70 | HC |
| SRR7265382 | embryo | 3hA | 14.15 | HC |
| SRR7265383 | embryo | 3hA | 14.98 | HC |
| SRR7265384 | embryo | 3hA | 13.31 | HC |
| SRR7265385 | embryo | 3hN | 9.55 | HC |
| SRR7265386 | embryo | 3hN | 7.84 | HC |
| SRR7265387 | embryo | 3hN | 8.29 | HC |
| SRR7265388 | embryo | 12hA | 9.86 | HC |
| SRR7265389 | embryo | 12hA | 9.63 | HC |
| SRR7265390 | embryo | 12hA | 9.19 | HC |
| SRR7265391 | embryo | 12hN | 14.93 | HC |
| SRR7265392 | embryo | 12hN | 14.19 | HC |
| SRR7265393 | embryo | 12hN | 15.56 | HC |
| SRR7265394 | embryo | 24hA | 6.62 | HC |
| SRR7265395 | embryo | 24hA | 8.56 | HC |
| SRR7265396 | embryo | 24hA | 8.20 | HC |
| SRR7265397 | embryo | 24hN | 13.85 | HC |
| SRR7265398 | embryo | 24hN | 12.86 | HC |
| SRR7265399 | embryo | 24hN | 12.23 | HC |
| SRR8060835 | leaf | wild_type | 5.10 | HC |
| SRR8060836 | leaf | wild_type | 4.28 | HC |
| SRR8060837 | leaf | wild_type | 5.29 | HC |
| SRR8240820 | leaf | wild_type | 2.83 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 10.25 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.87 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 13.14 | HC |
| SRR1952779 | leaf | 48_hrs_after_inoculation_with_BLS256 | 15.98 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.42 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.42 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.77 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.68 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 8.75 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 12.17 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.10 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 13.43 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 13.33 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.51 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.76 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.90 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.66 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 9.95 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 12.39 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.63 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.01 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.23 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.02 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 11.59 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.74 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 11.48 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 10.52 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 11.48 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 10.52 | HC |
| SRR1761528 | leaf | drought | 11.48 | HC |
| SRR1761529 | leaf | drought | 10.52 | HC |
| SRR504365 | leaf | wt | 6.14 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 3.91 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.00 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 9.48 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 8.06 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 6.75 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 7.11 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.09 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 9.56 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.56 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 7.08 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 6.54 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 3.97 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.77 | HC |
| SRR1213692 | leaf | wt | 4.81 | HC |
| SRR6168979 | leaf | none (control) | 6.73 | HC |
| SRR6168980 | leaf | none (control) | 5.78 | HC |
| SRR6168981 | leaf | none (control) | 15.13 | HC |
| SRR8582891 | panicle | PM | 28.58 | HC |
| SRR8582892 | panicle | PM | 41.41 | HC |
| SRR8582893 | panicle | PM | 30.44 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 12.68 | HC |
| SRR1633182 | panicle | WT | 7.29 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 6.17 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 8.63 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 7.80 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 7.79 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 6.73 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 5.61 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 8.11 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 9.48 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.34 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 10.67 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.75 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 14.83 | HC |
| SRR1213695 | root | wt | 3.72 | HC |
| SRR1740430 | root_meristematic_zone | wt | 3.67 | HC |
| SRR2154086 | seedling | wt | 8.18 | HC |
| SRR2154084 | seedling | wt | 5.81 | HC |
| SRR2154087 | seedling | wt | 4.77 | HC |
| SRR3098741 | seedling | wt | 3.64 | HC |
| SRR3098742 | seedling | wt | 4.15 | HC |
| SRR3098743 | seedling | wt | 4.52 | HC |
| SRR2857719 | seedling | drought_stress_0h | 4.54 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.68 | HC |
| SRR2857721 | seedling | drought_stress_6h | 24.09 | HC |
| SRR358793 | seedling | wt | 8.04 | HC |
| SRR358794 | seedling | wt | 7.13 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.08 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.11 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.76 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.18 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.30 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.05 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 6.76 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.88 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.91 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 10.47 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.01 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 14.45 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 9.08 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 11.03 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 8.63 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 9.17 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 9.15 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 9.70 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 10.00 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 10.38 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 7.94 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.45 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 11.92 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 10.93 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 14.19 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 11.91 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 13.09 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 5.58 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 4.48 | HC |