| SRR3745125 | anther | wt | 23.42 | HC |
| SRR3745126 | anther | wt | 26.46 | HC |
| SRR3745127 | anther | wt | 29.14 | HC |
| SRR5560727 | caryopsis | wild_type | 12.76 | HC |
| SRR5560728 | caryopsis | wild_type | 11.24 | HC |
| SRR5560729 | caryopsis | wild_type | 11.48 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.59 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 5.63 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 8.88 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.95 | HC |
| SRR7265400 | coleoptile | 2dA | 4.74 | HC |
| SRR7265401 | coleoptile | 2dA | 4.93 | HC |
| SRR7265402 | coleoptile | 2dA | 5.45 | HC |
| SRR7265403 | coleoptile | 2dN | 4.82 | HC |
| SRR7265404 | coleoptile | 2dN | 5.08 | HC |
| SRR7265405 | coleoptile | 2dN | 5.22 | HC |
| SRR7265406 | coleoptile | 3dA | 4.33 | HC |
| SRR7265407 | coleoptile | 3dA | 3.99 | HC |
| SRR7265408 | coleoptile | 3dA | 3.92 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 4.28 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 5.78 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 6.25 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 5.18 | HC |
| SRR7265373 | embryo | dry seed 0 h | 5.06 | HC |
| SRR7265374 | embryo | dry seed 0 h | 5.63 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.32 | HC |
| SRR7265376 | embryo | 1hA | 5.93 | HC |
| SRR7265377 | embryo | 1hA | 6.85 | HC |
| SRR7265378 | embryo | 1hA | 6.71 | HC |
| SRR7265379 | embryo | 1hN | 5.81 | HC |
| SRR7265380 | embryo | 1hN | 6.28 | HC |
| SRR7265381 | embryo | 1hN | 6.31 | HC |
| SRR7265385 | embryo | 3hN | 5.33 | HC |
| SRR7265386 | embryo | 3hN | 6.24 | HC |
| SRR7265387 | embryo | 3hN | 6.23 | HC |
| SRR7265388 | embryo | 12hA | 6.93 | HC |
| SRR7265389 | embryo | 12hA | 6.51 | HC |
| SRR7265390 | embryo | 12hA | 7.28 | HC |
| SRR7265391 | embryo | 12hN | 6.75 | HC |
| SRR7265392 | embryo | 12hN | 7.96 | HC |
| SRR7265393 | embryo | 12hN | 7.83 | HC |
| SRR7265394 | embryo | 24hA | 6.11 | HC |
| SRR7265395 | embryo | 24hA | 5.92 | HC |
| SRR7265396 | embryo | 24hA | 6.89 | HC |
| SRR7265398 | embryo | 24hN | 7.19 | HC |
| SRR7265399 | embryo | 24hN | 6.51 | HC |
| SRR1213690 | flower | wt(flower buds) | 8.97 | HC |
| SRR1213691 | flower | wt | 9.82 | HC |
| SRR8060835 | leaf | wild_type | 9.32 | HC |
| SRR8060836 | leaf | wild_type | 9.73 | HC |
| SRR8060837 | leaf | wild_type | 10.02 | HC |
| SRR8240824 | leaf | wild_type | 4.62 | HC |
| SRR8240825 | leaf | wild_type | 4.70 | HC |
| SRR8240826 | leaf | wild_type | 3.17 | HC |
| SRR8240818 | leaf | wild_type | 4.78 | HC |
| SRR8240819 | leaf | wild_type | 4.53 | HC |
| SRR8240820 | leaf | wild_type | 4.18 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 6.20 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.44 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 8.71 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 6.06 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.79 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 5.98 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 4.76 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.92 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.44 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 4.94 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 5.63 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.37 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 4.66 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.72 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.24 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.46 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 5.31 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.03 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 5.44 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.90 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 14.59 | HC |
| SRR1761789 | leaf | "wild_type,drought,2" | 29.55 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 6.30 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 14.59 | HC |
| SRR1761781 | leaf | "wild_type,drought,1" | 29.55 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 6.30 | HC |
| SRR1761528 | leaf | drought | 14.59 | HC |
| SRR1761529 | leaf | drought | 29.56 | HC |
| SRR1761531 | leaf | control | 6.30 | HC |
| SRR504365 | leaf | wt | 4.27 | HC |
| SRR6417967 | leaf | H2O_control | 4.02 | HC |
| SRR6417969 | leaf | H2O_control | 4.21 | HC |
| SRR3209770 | leaf | Watered;Long_Day | 3.82 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 7.63 | HC |
| SRR3209772 | leaf | Drought;Long_Day | 6.41 | HC |
| SRR3209774 | leaf | Watered;Short_Day | 4.64 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 10.09 | HC |
| SRR3209776 | leaf | Drought;Short_Day | 10.83 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 9.72 | HC |
| SRR3209779 | leaf | Watered;Short_Day | 4.15 | HC |
| SRR3209780 | leaf | Drought;Short_Day | 10.75 | HC |
| SRR8611900 | leaf | Non-inoculated | 8.16 | HC |
| SRR8611901 | leaf | Non-inoculated | 7.29 | HC |
| SRR8611902 | leaf | Non-inoculated | 7.42 | HC |
| SRR8611909 | leaf | Inoculated with Pyricularia oryzae | 5.61 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.07 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.09 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.43 | HC |
| SRR1213692 | leaf | wt | 7.92 | HC |
| SRR1213693 | leaf | wt | 5.77 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 5.04 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.56 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 5.89 | HC |
| SRR6502088 | leaf | control | 5.41 | HC |
| SRR6502089 | leaf | control | 5.89 | HC |
| SRR6502090 | leaf | control | 6.35 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 7.33 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 6.63 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 8.57 | HC |
| SRR6502100 | leaf | control | 6.51 | HC |
| SRR6502101 | leaf | control | 4.62 | HC |
| SRR6168973 | leaf | none (control) | 16.15 | HC |
| SRR6168974 | leaf | none (control) | 18.75 | HC |
| SRR6168975 | leaf | none (control) | 11.83 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 19.70 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 21.69 | HC |
| SRR6168981 | leaf | none (control) | 3.85 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 4.41 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.63 | HC |
| SRR8582889 | panicle | AM | 1.98 | HC |
| SRR8582893 | panicle | PM | 6.52 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 3.23 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 10.71 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 13.08 | HC |
| SRR5126147 | root | "mock,1_day" | 5.66 | HC |
| SRR5126148 | root | "mock,1_day" | 6.54 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.35 | HC |
| SRR5126155 | root | "mock,7_days" | 4.95 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 5.97 | HC |
| SRR5126167 | root | "mock,14_days" | 5.10 | HC |
| SRR5126169 | root | "mock,14_days" | 4.65 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 6.50 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.10 | HC |
| SRR1213694 | root | wt | 3.79 | HC |
| SRR1213695 | root | wt | 5.10 | HC |
| SRR4947488 | root | control | 5.31 | HC |
| SRR4947489 | root | control | 5.12 | HC |
| SRR6502091 | root | 100 mM NaCl | 5.08 | HC |
| SRR6502092 | root | 100 mM NaCl | 6.41 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.92 | HC |
| SRR6502104 | root | 100 mM NaCl | 6.24 | HC |
| SRR6502105 | root | 100 mM NaCl | 7.23 | HC |
| SRR6502107 | root | control | 4.78 | HC |
| SRR6502108 | root | control | 4.81 | HC |
| SRR1740434 | root_differentiation_zone | wt | 6.62 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.92 | HC |
| SRR1740436 | root_differentiation_zone | wt | 3.89 | HC |
| SRR1740431 | root_elongation_zone | wt | 14.27 | HC |
| SRR1740432 | root_elongation_zone | wt | 11.12 | HC |
| SRR1740433 | root_elongation_zone | wt | 12.91 | HC |
| SRR1740428 | root_meristematic_zone | wt | 14.38 | HC |
| SRR1740429 | root_meristematic_zone | wt | 9.93 | HC |
| SRR1740430 | root_meristematic_zone | wt | 11.67 | HC |
| SRR6441554 | seedling | wild_type | 6.95 | HC |
| SRR6441555 | seedling | wild_type | 6.13 | HC |
| SRR2154085 | seedling | wt | 4.97 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.02 | HC |
| SRR2857720 | seedling | drought_stress_1h | 9.02 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.89 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.42 | HC |
| SRR1288365 | shoot | "none,7_days_post_infection" | 5.88 | HC |
| SRR1288368 | shoot | "roots_rot_nematode_(H._oryzae),3_days_post_infection" | 15.96 | HC |
| SRR1288369 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 11.77 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 10.28 | HC |
| SRR4841743 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 7.99 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 9.23 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 6.88 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.63 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.72 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.10 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 3.75 | HC |
| SRR3950250 | shoot | Drought_during_3_days;_mock_inoculated | 8.25 | HC |
| SRR3950253 | shoot | No_DIS;_mock_inoculated | 4.82 | HC |
| SRR3950254 | shoot | No_DIS;_mock_inoculated | 5.61 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.29 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.98 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.97 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 6.22 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 2.98 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.84 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.78 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.26 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 2.58 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.88 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 5.25 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.38 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 4.70 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 8.92 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 9.02 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 9.91 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 8.48 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 8.50 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 7.81 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.31 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 4.41 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 5.37 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 6.56 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 5.16 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 6.62 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 5.52 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 5.31 | HC |