| SRR4457249 | 2nd_leaf | DAH4 | 14.62 | HC |
| SRR4457250 | 2nd_leaf | DAH4 | 9.05 | HC |
| SRR4457251 | 2nd_leaf | DAH4 | 16.92 | HC |
| SRR4457252 | 2nd_leaf | DAH12 | 14.26 | HC |
| SRR4457253 | 2nd_leaf | DAH12 | 12.10 | HC |
| SRR4457254 | 2nd_leaf | DAH12 | 6.92 | HC |
| SRR4457255 | 2nd_leaf | DAH20 | 13.41 | HC |
| SRR4457256 | 2nd_leaf | DAH20 | 17.24 | HC |
| SRR4457257 | 2nd_leaf | DAH20 | 15.65 | HC |
| SRR4457258 | 2nd_leaf | DAH28 | 12.67 | HC |
| SRR4457259 | 2nd_leaf | DAH28 | 7.40 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 13.49 | HC |
| SRR4457261 | 2nd_leaf | DAH36 | 19.95 | HC |
| SRR4457262 | 2nd_leaf | DAH36 | 18.44 | HC |
| SRR4457263 | 2nd_leaf | DAH36 | 10.52 | HC |
| SRR4457264 | 2nd_leaf | DAH44 | 13.90 | HC |
| SRR4457265 | 2nd_leaf | DAH44 | 14.42 | HC |
| SRR4457266 | 2nd_leaf | DAH44 | 13.48 | HC |
| SRR3745125 | anther | wt | 20.45 | HC |
| SRR3745126 | anther | wt | 24.93 | HC |
| SRR3745127 | anther | wt | 28.02 | HC |
| SRR5560727 | caryopsis | wild_type | 16.75 | HC |
| SRR5560728 | caryopsis | wild_type | 9.64 | HC |
| SRR5560729 | caryopsis | wild_type | 17.44 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 8.90 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 8.82 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 4.64 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 8.37 | HC |
| SRR7265400 | coleoptile | 2dA | 17.84 | HC |
| SRR7265401 | coleoptile | 2dA | 19.43 | HC |
| SRR7265402 | coleoptile | 2dA | 19.25 | HC |
| SRR7265403 | coleoptile | 2dN | 14.04 | HC |
| SRR7265404 | coleoptile | 2dN | 13.27 | HC |
| SRR7265405 | coleoptile | 2dN | 13.43 | HC |
| SRR7265406 | coleoptile | 3dA | 11.92 | HC |
| SRR7265407 | coleoptile | 3dA | 10.89 | HC |
| SRR7265408 | coleoptile | 3dA | 8.40 | HC |
| SRR7265409 | coleoptile | 3dN | 13.47 | HC |
| SRR7265410 | coleoptile | 3dN | 12.18 | HC |
| SRR7265411 | coleoptile | 3dN | 10.60 | HC |
| SRR7265412 | coleoptile | 4dA | 4.26 | HC |
| SRR7265413 | coleoptile | 4dA | 6.05 | HC |
| SRR7265414 | coleoptile | 4dA | 5.70 | HC |
| SRR7265415 | coleoptile | 4dN | 12.36 | HC |
| SRR7265416 | coleoptile | 4dN | 8.27 | HC |
| SRR7265417 | coleoptile | 4dN | 8.97 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 8.96 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 12.55 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 10.55 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 10.54 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 9.52 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 17.95 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 13.09 | HC |
| SRR7265373 | embryo | dry seed 0 h | 11.18 | HC |
| SRR7265374 | embryo | dry seed 0 h | 10.43 | HC |
| SRR7265375 | embryo | dry seed 0 h | 4.26 | HC |
| SRR7265376 | embryo | 1hA | 7.60 | HC |
| SRR7265377 | embryo | 1hA | 8.90 | HC |
| SRR7265378 | embryo | 1hA | 11.21 | HC |
| SRR7265379 | embryo | 1hN | 9.27 | HC |
| SRR7265380 | embryo | 1hN | 9.35 | HC |
| SRR7265381 | embryo | 1hN | 9.74 | HC |
| SRR7265382 | embryo | 3hA | 8.79 | HC |
| SRR7265383 | embryo | 3hA | 10.46 | HC |
| SRR7265384 | embryo | 3hA | 10.61 | HC |
| SRR7265385 | embryo | 3hN | 9.17 | HC |
| SRR7265386 | embryo | 3hN | 8.78 | HC |
| SRR7265387 | embryo | 3hN | 9.13 | HC |
| SRR7265388 | embryo | 12hA | 21.66 | HC |
| SRR7265389 | embryo | 12hA | 19.47 | HC |
| SRR7265390 | embryo | 12hA | 20.04 | HC |
| SRR7265391 | embryo | 12hN | 15.90 | HC |
| SRR7265392 | embryo | 12hN | 18.11 | HC |
| SRR7265393 | embryo | 12hN | 17.82 | HC |
| SRR7265394 | embryo | 24hA | 17.75 | HC |
| SRR7265395 | embryo | 24hA | 17.25 | HC |
| SRR7265396 | embryo | 24hA | 19.68 | HC |
| SRR7265397 | embryo | 24hN | 17.89 | HC |
| SRR7265398 | embryo | 24hN | 17.89 | HC |
| SRR7265399 | embryo | 24hN | 15.61 | HC |
| SRR2338866 | endosprem | control | 6.63 | HC |
| SRR2338867 | endosprem | control | 3.24 | HC |
| SRR2338868 | endosprem | high_temperature | 3.99 | HC |
| SRR2338869 | endosprem | high_temperature | 4.03 | HC |
| SRR4457231 | flag_leaf | DAH4 | 10.88 | HC |
| SRR4457232 | flag_leaf | DAH4 | 7.60 | HC |
| SRR4457233 | flag_leaf | DAH4 | 12.19 | HC |
| SRR4457234 | flag_leaf | DAH12 | 10.27 | HC |
| SRR4457235 | flag_leaf | DAH12 | 7.12 | HC |
| SRR4457236 | flag_leaf | DAH12 | 7.27 | HC |
| SRR4457237 | flag_leaf | DAH20 | 8.35 | HC |
| SRR4457238 | flag_leaf | DAH20 | 14.54 | HC |
| SRR4457239 | flag_leaf | DAH20 | 6.33 | HC |
| SRR4457240 | flag_leaf | DAH28 | 7.19 | HC |
| SRR4457241 | flag_leaf | DAH28 | 7.00 | HC |
| SRR4457242 | flag_leaf | DAH28 | 12.80 | HC |
| SRR4457243 | flag_leaf | DAH36 | 13.31 | HC |
| SRR4457244 | flag_leaf | DAH36 | 13.40 | HC |
| SRR4457245 | flag_leaf | DAH36 | 17.35 | HC |
| SRR4457246 | flag_leaf | DAH44 | 11.56 | HC |
| SRR4457247 | flag_leaf | DAH44 | 9.64 | HC |
| SRR4457248 | flag_leaf | DAH44 | 10.96 | HC |
| SRR1213690 | flower | wt(flower buds) | 17.23 | HC |
| SRR1213691 | flower | wt | 11.92 | HC |
| SRR8060835 | leaf | wild_type | 3.54 | HC |
| SRR8060837 | leaf | wild_type | 4.18 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 5.58 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 6.91 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 9.16 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 11.61 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.83 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 9.25 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 10.17 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.29 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 11.71 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 10.98 | HC |
| SRR1952785 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 11.54 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 6.89 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 12.78 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 12.12 | HC |
| SRR1952791 | leaf | 48_hrs_after_inoculation_with_L8 | 10.48 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 6.31 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 6.15 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.87 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 8.67 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 7.32 | HC |
| SRR1952798 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 14.00 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.23 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.02 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 11.33 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 9.14 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.64 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.35 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.94 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 10.42 | HC |
| SRR1952809 | leaf | 48_hrs_after_mock_inoculation | 8.05 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 10.82 | HC |
| SRR1761790 | leaf | "wild_type,control,2" | 7.46 | HC |
| SRR1761791 | leaf | "wild_type,control,2" | 8.88 | HC |
| SRR1761782 | leaf | "wild_type,control,1" | 7.46 | HC |
| SRR1761783 | leaf | "wild_type,control,1" | 8.88 | HC |
| SRR1761530 | leaf | control | 7.46 | HC |
| SRR1761531 | leaf | control | 8.88 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 6.58 | HC |
| SRR6417966 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.58 | HC |
| SRR6417967 | leaf | H2O_control | 4.35 | HC |
| SRR6417968 | leaf | H2O_control | 4.92 | HC |
| SRR6417969 | leaf | H2O_control | 4.27 | HC |
| SRR3209771 | leaf | Drought;Long_Day | 6.09 | HC |
| SRR3209775 | leaf | Drought;Short_Day | 4.37 | HC |
| SRR3209778 | leaf | Drought;Long_Day | 6.47 | HC |
| SRR8611900 | leaf | Non-inoculated | 3.79 | HC |
| SRR8611901 | leaf | Non-inoculated | 4.02 | HC |
| SRR8611902 | leaf | Non-inoculated | 4.55 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 7.38 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 7.51 | HC |
| SRR1213693 | leaf | wt | 3.90 | HC |
| SRR6502085 | leaf | 100 mM NaCl | 8.61 | HC |
| SRR6502086 | leaf | 100 mM NaCl | 6.94 | HC |
| SRR6502087 | leaf | 100 mM NaCl | 10.99 | HC |
| SRR6502088 | leaf | control | 6.50 | HC |
| SRR6502089 | leaf | control | 10.17 | HC |
| SRR6502090 | leaf | control | 6.86 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 5.99 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 5.85 | HC |
| SRR6168973 | leaf | none (control) | 13.51 | HC |
| SRR6168974 | leaf | none (control) | 8.76 | HC |
| SRR6168975 | leaf | none (control) | 11.96 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 11.09 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 7.52 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 14.66 | HC |
| SRR6168979 | leaf | none (control) | 2.02 | HC |
| SRR6168980 | leaf | none (control) | 2.77 | HC |
| SRR6168981 | leaf | none (control) | 3.12 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 4.40 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 5.38 | HC |
| SRR8582888 | panicle | AM | 3.42 | HC |
| SRR8582890 | panicle | AM | 3.60 | HC |
| SRR8582891 | panicle | PM | 6.28 | HC |
| SRR8582892 | panicle | PM | 11.99 | HC |
| SRR8582893 | panicle | PM | 4.97 | HC |
| SRR4947496 | root | control | 6.38 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 8.53 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 7.86 | HC |
| SRR1633182 | panicle | WT | 9.37 | HC |
| SRR1633185 | panicle | WT | 16.15 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 5.11 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 5.06 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 5.97 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.05 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 7.71 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 12.39 | HC |
| SRR5126147 | root | "mock,1_day" | 14.98 | HC |
| SRR5126148 | root | "mock,1_day" | 16.25 | HC |
| SRR5126149 | root | "mock,1_day" | 13.79 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 14.78 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 20.13 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 22.15 | HC |
| SRR5126153 | root | "mock,7_days" | 12.31 | HC |
| SRR5126155 | root | "mock,7_days" | 14.36 | HC |
| SRR5126157 | root | "mock,7_days" | 13.74 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 13.75 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 13.80 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 16.45 | HC |
| SRR5126165 | root | "mock,14_days" | 12.67 | HC |
| SRR5126167 | root | "mock,14_days" | 10.11 | HC |
| SRR5126169 | root | "mock,14_days" | 12.14 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.47 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 12.46 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 11.66 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 9.89 | HC |
| SRR1213694 | root | wt | 6.07 | HC |
| SRR1213695 | root | wt | 7.35 | HC |
| SRR4947480 | root | control | 12.19 | HC |
| SRR4947481 | root | control | 7.23 | HC |
| SRR4947484 | root | Al | 9.09 | HC |
| SRR4947488 | root | control | 8.62 | HC |
| SRR4947489 | root | control | 6.29 | HC |
| SRR4947492 | root | Al | 11.28 | HC |
| SRR4947493 | root | Al | 6.49 | HC |
| SRR4947500 | root | Al | 11.76 | HC |
| SRR4947504 | root | control | 11.21 | HC |
| SRR4947508 | root | Al | 8.54 | HC |
| SRR6502091 | root | 100 mM NaCl | 15.33 | HC |
| SRR6502092 | root | 100 mM NaCl | 14.83 | HC |
| SRR6502093 | root | 100 mM NaCl | 15.15 | HC |
| SRR6502095 | root | control | 11.01 | HC |
| SRR6502096 | root | control | 7.29 | HC |
| SRR6502103 | root | 100 mM NaCl | 8.49 | HC |
| SRR6502104 | root | 100 mM NaCl | 5.96 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.98 | HC |
| SRR6502106 | root | control | 4.77 | HC |
| SRR6502108 | root | control | 6.98 | HC |
| SRR1740434 | root_differentiation_zone | wt | 3.79 | HC |
| SRR1740435 | root_differentiation_zone | wt | 12.72 | HC |
| SRR1740436 | root_differentiation_zone | wt | 6.72 | HC |
| SRR1740431 | root_elongation_zone | wt | 5.34 | HC |
| SRR1740432 | root_elongation_zone | wt | 21.34 | HC |
| SRR1740433 | root_elongation_zone | wt | 10.33 | HC |
| SRR1740428 | root_meristematic_zone | wt | 11.59 | HC |
| SRR1740429 | root_meristematic_zone | wt | 20.89 | HC |
| SRR1740430 | root_meristematic_zone | wt | 12.61 | HC |
| SRR6441554 | seedling | wild_type | 8.99 | HC |
| SRR6441555 | seedling | wild_type | 5.60 | HC |
| SRR2154086 | seedling | wt | 12.69 | HC |
| SRR2154083 | seedling | wt | 8.94 | HC |
| SRR2154085 | seedling | wt | 8.15 | HC |
| SRR2154087 | seedling | wt | 12.93 | HC |
| SRR2857719 | seedling | drought_stress_0h | 16.00 | HC |
| SRR2857720 | seedling | drought_stress_1h | 14.36 | HC |
| SRR2857721 | seedling | drought_stress_6h | 5.12 | HC |
| SRR1944583 | seedling | no_treatment | 4.82 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 4.01 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 4.94 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 4.08 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.23 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.33 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.15 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.74 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.88 | HC |
| SRR5796952 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.70 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 7.70 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 15.18 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 9.91 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 11.17 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 9.31 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 12.89 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 14.78 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 11.95 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 12.82 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 12.94 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.37 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 10.80 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 10.74 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 8.78 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 8.91 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 13.72 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 9.39 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 8.37 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 6.11 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 4.35 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 8.25 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 8.92 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 7.97 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 8.02 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 8.47 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.11 | HC |