| SRR3745125 | anther | wt | 6.31 | HC |
| SRR5560728 | caryopsis | wild_type | 9.50 | HC |
| SRR5560729 | caryopsis | wild_type | 12.07 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 9.30 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 10.10 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 5.75 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.61 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 6.47 | HC |
| SRR2338866 | endosprem | control | 5.29 | HC |
| SRR2338867 | endosprem | control | 2.83 | HC |
| SRR2338868 | endosprem | high_temperature | 3.15 | HC |
| SRR2338869 | endosprem | high_temperature | 4.07 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.20 | HC |
| SRR1213691 | flower | wt | 6.05 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 7.27 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 8.85 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 7.58 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 8.56 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.16 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 6.50 | HC |
| SRR6168973 | leaf | none (control) | 4.78 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 7.12 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 5.69 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 3.93 | HC |
| SRR4947496 | root | control | 9.84 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 4.18 | HC |
| SRR1633182 | panicle | WT | 12.59 | HC |
| SRR1633185 | panicle | WT | 13.31 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 7.81 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 8.14 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 10.15 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 10.74 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 12.36 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 11.05 | HC |
| SRR5126147 | root | "mock,1_day" | 8.66 | HC |
| SRR5126148 | root | "mock,1_day" | 4.62 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.54 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 5.89 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.40 | HC |
| SRR5126153 | root | "mock,7_days" | 7.69 | HC |
| SRR5126155 | root | "mock,7_days" | 6.28 | HC |
| SRR5126157 | root | "mock,7_days" | 7.27 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.82 | HC |
| SRR5126165 | root | "mock,14_days" | 6.59 | HC |
| SRR5126169 | root | "mock,14_days" | 6.52 | HC |
| SRR4947480 | root | control | 9.53 | HC |
| SRR4947481 | root | control | 14.42 | HC |
| SRR4947484 | root | Al | 7.04 | HC |
| SRR4947485 | root | Al | 9.89 | HC |
| SRR4947488 | root | control | 8.11 | HC |
| SRR4947489 | root | control | 8.20 | HC |
| SRR4947492 | root | Al | 10.97 | HC |
| SRR4947493 | root | Al | 8.30 | HC |
| SRR4947497 | root | control | 13.46 | HC |
| SRR4947500 | root | Al | 12.28 | HC |
| SRR4947501 | root | Al | 12.89 | HC |
| SRR4947504 | root | control | 13.81 | HC |
| SRR4947505 | root | control | 15.19 | HC |
| SRR4947508 | root | Al | 9.80 | HC |
| SRR4947509 | root | Al | 9.46 | HC |
| SRR6502091 | root | 100 mM NaCl | 8.13 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.13 | HC |
| SRR6502093 | root | 100 mM NaCl | 8.63 | HC |
| SRR6502094 | root | control | 8.07 | HC |
| SRR6502095 | root | control | 6.84 | HC |
| SRR6502096 | root | control | 5.86 | HC |
| SRR6502103 | root | 100 mM NaCl | 9.13 | HC |
| SRR6502104 | root | 100 mM NaCl | 8.59 | HC |
| SRR6502105 | root | 100 mM NaCl | 6.81 | HC |
| SRR6502106 | root | control | 5.40 | HC |
| SRR6502107 | root | control | 6.65 | HC |
| SRR6502108 | root | control | 7.53 | HC |
| SRR1740435 | root_differentiation_zone | wt | 3.98 | HC |
| SRR1740436 | root_differentiation_zone | wt | 4.31 | HC |
| SRR6441554 | seedling | wild_type | 3.52 | HC |
| SRR2154086 | seedling | wt | 5.14 | HC |
| SRR2154087 | seedling | wt | 5.86 | HC |
| SRR3098741 | seedling | wt | 2.87 | HC |
| SRR3098742 | seedling | wt | 3.61 | HC |
| SRR2857719 | seedling | drought_stress_0h | 6.44 | HC |
| SRR2857720 | seedling | drought_stress_1h | 4.72 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.73 | HC |
| SRR5796941 | shoot | "Control,22C for 10 min" | 4.75 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.54 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.11 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 5.61 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.07 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 3.74 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.53 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.87 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.54 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.26 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 9.28 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.28 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.79 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 8.95 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 8.31 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 10.77 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 10.20 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 11.20 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 9.76 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 9.52 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 13.65 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 9.14 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 4.77 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 4.28 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 3.55 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 8.81 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 6.52 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.18 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 10.34 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 10.08 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 10.90 | HC |