| SRR6320473 | carpel | wt | 35.98 | HC |
| SRR6320498 | carpel | wt | 27.29 | HC |
| SRR5560727 | caryopsis | wild_type | 5.89 | HC |
| SRR5560728 | caryopsis | wild_type | 11.02 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 14.23 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 10.99 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 17.67 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 21.53 | HC |
| SRR7265400 | coleoptile | 2dA | 41.50 | HC |
| SRR7265401 | coleoptile | 2dA | 46.07 | HC |
| SRR7265402 | coleoptile | 2dA | 40.50 | HC |
| SRR7265403 | coleoptile | 2dN | 12.95 | HC |
| SRR7265404 | coleoptile | 2dN | 12.10 | HC |
| SRR7265405 | coleoptile | 2dN | 11.74 | HC |
| SRR7265406 | coleoptile | 3dA | 32.88 | HC |
| SRR7265407 | coleoptile | 3dA | 34.27 | HC |
| SRR7265408 | coleoptile | 3dA | 24.35 | HC |
| SRR7265409 | coleoptile | 3dN | 18.83 | HC |
| SRR7265410 | coleoptile | 3dN | 16.49 | HC |
| SRR7265411 | coleoptile | 3dN | 17.26 | HC |
| SRR7265412 | coleoptile | 4dA | 42.12 | HC |
| SRR7265413 | coleoptile | 4dA | 53.88 | HC |
| SRR7265414 | coleoptile | 4dA | 39.26 | HC |
| SRR7265415 | coleoptile | 4dN | 12.19 | HC |
| SRR7265416 | coleoptile | 4dN | 13.72 | HC |
| SRR7265417 | coleoptile | 4dN | 13.81 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 22.06 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 32.23 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 18.55 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 18.22 | HC |
| SRR4104645 | crown | "Zn_Efficient,8_days_of_treatment" | 13.59 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 13.48 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 11.08 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 17.43 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 15.03 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 14.21 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 18.53 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 15.18 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 18.98 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 17.85 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 20.66 | HC |
| SRR7265382 | embryo | 3hA | 8.11 | HC |
| SRR7265384 | embryo | 3hA | 7.10 | HC |
| SRR7265388 | embryo | 12hA | 39.10 | HC |
| SRR7265389 | embryo | 12hA | 43.59 | HC |
| SRR7265390 | embryo | 12hA | 43.58 | HC |
| SRR7265391 | embryo | 12hN | 20.54 | HC |
| SRR7265392 | embryo | 12hN | 17.43 | HC |
| SRR7265393 | embryo | 12hN | 20.58 | HC |
| SRR7265394 | embryo | 24hA | 27.97 | HC |
| SRR7265395 | embryo | 24hA | 27.78 | HC |
| SRR7265396 | embryo | 24hA | 23.84 | HC |
| SRR7265397 | embryo | 24hN | 18.73 | HC |
| SRR7265398 | embryo | 24hN | 17.44 | HC |
| SRR7265399 | embryo | 24hN | 18.38 | HC |
| SRR2338866 | endosprem | control | 7.69 | HC |
| SRR2338867 | endosprem | control | 4.47 | HC |
| SRR2338868 | endosprem | high_temperature | 4.12 | HC |
| SRR2338869 | endosprem | high_temperature | 7.25 | HC |
| SRR1213690 | flower | wt(flower buds) | 12.84 | HC |
| SRR1213691 | flower | wt | 14.49 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 22.16 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 20.50 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 16.75 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 15.64 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 5.27 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.87 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.11 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 8.08 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.11 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 6.42 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.88 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 6.49 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 8.43 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.68 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 5.75 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.07 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.23 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 8.42 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.35 | HC |
| SRR504365 | leaf | wt | 4.77 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 12.26 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 11.51 | HC |
| SRR5856928 | leaf | control | 3.79 | HC |
| SRR5856929 | leaf | control | 3.40 | HC |
| SRR5856930 | leaf | salt | 5.57 | HC |
| SRR5856931 | leaf | salt | 5.04 | HC |
| SRR5856932 | leaf | salt | 4.96 | HC |
| SRR5856934 | leaf | control | 2.52 | HC |
| SRR5856936 | leaf | salt | 4.49 | HC |
| SRR5856937 | leaf | salt | 5.96 | HC |
| SRR5856938 | leaf | salt | 7.86 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 25.68 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 25.56 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 26.43 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 8.45 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 9.59 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 9.69 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 20.36 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 8.60 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 10.65 | HC |
| SRR6168979 | leaf | none (control) | 2.24 | HC |
| SRR6168980 | leaf | none (control) | 9.37 | HC |
| SRR6168981 | leaf | none (control) | 40.53 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 34.29 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 15.43 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 41.10 | HC |
| SRR8582891 | panicle | PM | 8.84 | HC |
| SRR8582893 | panicle | PM | 5.00 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.55 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 98.21 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 104.20 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 35.00 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 34.01 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 25.51 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 36.74 | HC |
| SRR5126147 | root | "mock,1_day" | 5.21 | HC |
| SRR5126148 | root | "mock,1_day" | 6.32 | HC |
| SRR5126149 | root | "mock,1_day" | 5.36 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 7.89 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 7.58 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 14.51 | HC |
| SRR5126153 | root | "mock,7_days" | 5.52 | HC |
| SRR5126155 | root | "mock,7_days" | 7.89 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 7.54 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 15.22 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 12.18 | HC |
| SRR5126165 | root | "mock,14_days" | 26.06 | HC |
| SRR5126167 | root | "mock,14_days" | 5.83 | HC |
| SRR5126169 | root | "mock,14_days" | 8.69 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 8.17 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 5.79 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 7.02 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 5.13 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 21.48 | HC |
| SRR1213694 | root | wt | 4.30 | HC |
| SRR1213695 | root | wt | 3.46 | HC |
| SRR4947480 | root | control | 6.34 | HC |
| SRR4947488 | root | control | 8.17 | HC |
| SRR4947489 | root | control | 5.76 | HC |
| SRR6502094 | root | control | 6.44 | HC |
| SRR6502096 | root | control | 6.54 | HC |
| SRR6502103 | root | 100 mM NaCl | 5.67 | HC |
| SRR6502104 | root | 100 mM NaCl | 11.69 | HC |
| SRR6502105 | root | 100 mM NaCl | 4.84 | HC |
| SRR6502106 | root | control | 6.48 | HC |
| SRR6502107 | root | control | 10.08 | HC |
| SRR6502108 | root | control | 7.14 | HC |
| SRR1740435 | root_differentiation_zone | wt | 5.62 | HC |
| SRR1740436 | root_differentiation_zone | wt | 5.22 | HC |
| SRR6441554 | seedling | wild_type | 4.76 | HC |
| SRR6441555 | seedling | wild_type | 4.82 | HC |
| SRR2154086 | seedling | wt | 5.08 | HC |
| SRR2154082 | seedling | wt | 9.61 | HC |
| SRR2154083 | seedling | wt | 4.56 | HC |
| SRR2154084 | seedling | wt | 16.17 | HC |
| SRR2154085 | seedling | wt | 7.23 | HC |
| SRR2154087 | seedling | wt | 4.30 | HC |
| SRR3098741 | seedling | wt | 6.87 | HC |
| SRR3098742 | seedling | wt | 4.00 | HC |
| SRR3098743 | seedling | wt | 8.71 | HC |
| SRR2857719 | seedling | drought_stress_0h | 14.52 | HC |
| SRR2857720 | seedling | drought_stress_1h | 13.10 | HC |
| SRR2857721 | seedling | drought_stress_6h | 48.27 | HC |
| SRR1288363 | shoot | "none,3_days_post_infection" | 4.03 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.90 | HC |
| SRR1288366 | shoot | "none,7_days_post_infection" | 8.48 | HC |
| SRR4841741 | shoot | shoots_of_Meloidogyne_graminicola_infected_3_dai | 3.61 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 3.24 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.25 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 5.78 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 4.89 | HC |
| SRR3950251 | shoot | Drought_during_3_days;_mock_inoculated | 6.14 | HC |
| SRR5796954 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 4.00 | HC |
| SRR5796955 | shoot | "Heat, 42C for 10 min, then 30C for 50 min" | 3.65 | HC |
| SRR5796956 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 9.50 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 8.33 | HC |
| SRR1617549 | shoot_apical_meristem | no collect | 11.62 | HC |
| SRR1617550 | shoot_apical_meristem | no collect | 12.75 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 46.47 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 51.55 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 41.47 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 16.69 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 15.04 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 9.21 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 17.71 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 19.19 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 19.94 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 61.73 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 65.28 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 62.74 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 30.21 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 29.32 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 23.26 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.86 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 4.03 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.37 | HC |