| SRR4457250 | 2nd_leaf | DAH4 | 4.95 | HC |
| SRR4457260 | 2nd_leaf | DAH28 | 4.05 | HC |
| SRR3745126 | anther | wt | 6.54 | HC |
| SRR5560727 | caryopsis | wild_type | 19.76 | HC |
| SRR5560728 | caryopsis | wild_type | 18.22 | HC |
| SRR5560729 | caryopsis | wild_type | 14.83 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 4.71 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 4.41 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 5.15 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 4.74 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 5.95 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 4.27 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 3.69 | HC |
| SRR7265373 | embryo | dry seed 0 h | 9.21 | HC |
| SRR7265374 | embryo | dry seed 0 h | 9.09 | HC |
| SRR7265375 | embryo | dry seed 0 h | 2.12 | HC |
| SRR7265376 | embryo | 1hA | 7.77 | HC |
| SRR7265377 | embryo | 1hA | 7.29 | HC |
| SRR7265378 | embryo | 1hA | 8.35 | HC |
| SRR7265379 | embryo | 1hN | 9.45 | HC |
| SRR7265380 | embryo | 1hN | 6.48 | HC |
| SRR7265381 | embryo | 1hN | 8.06 | HC |
| SRR7265382 | embryo | 3hA | 6.81 | HC |
| SRR7265383 | embryo | 3hA | 7.87 | HC |
| SRR7265384 | embryo | 3hA | 6.16 | HC |
| SRR7265385 | embryo | 3hN | 7.52 | HC |
| SRR7265386 | embryo | 3hN | 8.29 | HC |
| SRR7265387 | embryo | 3hN | 8.24 | HC |
| SRR2338866 | endosprem | control | 5.44 | HC |
| SRR2338867 | endosprem | control | 2.47 | HC |
| SRR2338868 | endosprem | high_temperature | 3.98 | HC |
| SRR2338869 | endosprem | high_temperature | 6.73 | HC |
| SRR1213690 | flower | wt(flower buds) | 4.10 | HC |
| SRR1213691 | flower | wt | 5.44 | HC |
| SRR5110429 | panicle | Dawn | 9.37 | HC |
| SRR5110430 | panicle | Dawn | 8.78 | HC |
| SRR5110431 | panicle | Dawn | 7.57 | HC |
| SRR4947496 | root | control | 5.22 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 6.16 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 4.68 | HC |
| SRR5110437 | panicle | Dawn + 7h | 5.60 | HC |
| SRR5110438 | panicle | Dawn + 7h | 4.30 | HC |
| SRR5110439 | panicle | Dawn + 7h | 6.19 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 3.88 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 6.51 | HC |
| SRR5110445 | panicle | Dusk | 6.06 | HC |
| SRR5110446 | panicle | Dusk | 6.32 | HC |
| SRR5110447 | panicle | Dusk | 7.52 | HC |
| SRR5110448 | panicle | Dusk | 7.34 | HC |
| SRR5110449 | panicle | Dawn + 14h | 6.83 | HC |
| SRR5110450 | panicle | Dawn + 14h | 6.06 | HC |
| SRR5110451 | panicle | Dawn + 14h | 7.37 | HC |
| SRR5110452 | panicle | Dawn + 14h | 6.01 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 4.99 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 4.92 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 4.73 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 6.56 | HC |
| SRR5110457 | panicle | Dawn + 21h | 4.11 | HC |
| SRR5110458 | panicle | Dawn + 21h | 3.81 | HC |
| SRR5110459 | panicle | Dawn + 21h | 5.26 | HC |
| SRR5110460 | panicle | Dawn + 21h | 8.65 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 3.77 | HC |
| SRR1213697 | endosprem | wt(mature seeds) | 11.17 | HC |
| SRR1633182 | panicle | WT | 6.73 | HC |
| SRR1633185 | panicle | WT | 10.59 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 9.28 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 9.01 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 11.62 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 13.67 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 17.06 | HC |
| SRR5278379 | pistil | "Balilla,S3" | 16.89 | HC |
| SRR5126147 | root | "mock,1_day" | 7.80 | HC |
| SRR5126148 | root | "mock,1_day" | 6.08 | HC |
| SRR5126149 | root | "mock,1_day" | 9.27 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 10.12 | HC |
| SRR5126151 | root | "auxin(50CM_2,4_D),1_day" | 8.83 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 6.65 | HC |
| SRR5126153 | root | "mock,7_days" | 11.37 | HC |
| SRR5126155 | root | "mock,7_days" | 13.32 | HC |
| SRR5126157 | root | "mock,7_days" | 13.68 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 13.00 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 13.08 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 13.53 | HC |
| SRR5126165 | root | "mock,14_days" | 13.07 | HC |
| SRR5126167 | root | "mock,14_days" | 7.51 | HC |
| SRR5126169 | root | "mock,14_days" | 14.00 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 9.83 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 11.10 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 21.84 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 3.70 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.33 | HC |
| SRR1213694 | root | wt | 3.91 | HC |
| SRR4947481 | root | control | 6.83 | HC |
| SRR4947485 | root | Al | 7.05 | HC |
| SRR4947489 | root | control | 6.09 | HC |
| SRR4947491 | root | Al | 6.53 | HC |
| SRR4947492 | root | Al | 5.86 | HC |
| SRR4947493 | root | Al | 4.86 | HC |
| SRR4947497 | root | control | 9.83 | HC |
| SRR4947498 | root | Al | 6.14 | HC |
| SRR4947500 | root | Al | 7.98 | HC |
| SRR4947501 | root | Al | 9.03 | HC |
| SRR4947505 | root | control | 6.72 | HC |
| SRR4947506 | root | Al | 4.58 | HC |
| SRR4947508 | root | Al | 6.74 | HC |
| SRR4947509 | root | Al | 6.77 | HC |
| SRR1740435 | root_differentiation_zone | wt | 2.78 | HC |
| SRR1740432 | root_elongation_zone | wt | 4.57 | HC |
| SRR1740429 | root_meristematic_zone | wt | 6.07 | HC |
| SRR1740430 | root_meristematic_zone | wt | 3.72 | HC |
| SRR2154083 | seedling | wt | 4.57 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 21.85 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 17.85 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 19.03 | HC |
| SRR5052711 | shoot_apical_meristem | 4_days_after_shift | 14.49 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 25.02 | HC |
| SRR5052714 | shoot_apical_meristem | 4_days_after_shift | 20.26 | HC |
| SRR5052716 | shoot_apical_meristem | 8_days_after_shift | 17.47 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 18.52 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 18.36 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 15.14 | HC |
| SRR5052722 | shoot_apical_meristem | 12_days_after_shift | 17.18 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 19.26 | HC |
| SRR5052724 | shoot_apical_meristem | 0_days_after_shift | 15.89 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 17.87 | HC |
| SRR5052726 | shoot_apical_meristem | 0_days_after_shift | 23.17 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 17.90 | HC |
| SRR5052728 | shoot_apical_meristem | 4_days_after_shift | 19.04 | HC |
| SRR5052730 | shoot_apical_meristem | 4_days_after_shift | 19.52 | HC |
| SRR5052731 | shoot_apical_meristem | 8_days_after_shift | 19.93 | HC |
| SRR5052732 | shoot_apical_meristem | 8_days_after_shift | 24.51 | HC |
| SRR5052733 | shoot_apical_meristem | 8_days_after_shift | 13.24 | HC |
| SRR5052734 | shoot_apical_meristem | 12_days_after_shift | 20.54 | HC |
| SRR5052735 | shoot_apical_meristem | 12_days_after_shift | 32.41 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 11.39 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 13.90 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 9.38 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 9.25 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 8.50 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.47 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.04 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 4.13 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 5.42 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 5.99 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.15 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 2.43 | HC |