| SRR5560729 | caryopsis | wild_type | 6.42 | HC |
| SRR3015587 | coleoptile | wild_type_plus_1hr_shade | 6.55 | HC |
| SRR3015588 | coleoptile | wild_type_plus_1hr_shade | 6.69 | HC |
| SRR3015589 | coleoptile | wild_type_plus_1hr_white_light | 5.16 | HC |
| SRR3015591 | coleoptile | wild_type_plus_1hr_white_light | 7.10 | HC |
| SRR8060835 | leaf | wild_type | 4.13 | HC |
| SRR8060836 | leaf | wild_type | 9.00 | HC |
| SRR8060837 | leaf | wild_type | 4.25 | HC |
| SRR3015592 | leaf | wild_type_plus_1hr_shade | 7.32 | HC |
| SRR3015594 | leaf | wild_type_plus_1hr_shade | 7.78 | HC |
| SRR3015595 | leaf | wild_type_plus_1hr_white_light | 4.75 | HC |
| SRR3015597 | leaf | wild_type_plus_1hr_white_light | 5.86 | HC |
| SRR504365 | leaf | wt | 4.58 | HC |
| SRR8611900 | leaf | Non-inoculated | 3.97 | HC |
| SRR8611901 | leaf | Non-inoculated | 3.75 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.60 | HC |
| SRR6216698 | leaf | nontransgenic rice plant | 6.20 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 5.33 | HC |
| SRR5856932 | leaf | salt | 1.98 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 8.37 | HC |
| SRR6168973 | leaf | none (control) | 10.70 | HC |
| SRR6168974 | leaf | none (control) | 10.65 | HC |
| SRR6168975 | leaf | none (control) | 7.87 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 14.51 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 13.12 | HC |
| SRR8582893 | panicle | PM | 5.82 | HC |
| SRR5110446 | panicle | Dusk | 6.20 | HC |
| SRR5110447 | panicle | Dusk | 5.13 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 3.42 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 3.79 | HC |
| SRR6502105 | root | 100 mM NaCl | 5.71 | HC |
| SRR1740435 | root_differentiation_zone | wt | 2.82 | HC |
| SRR1740432 | root_elongation_zone | wt | 3.73 | HC |
| SRR1740433 | root_elongation_zone | wt | 4.66 | HC |
| SRR1740428 | root_meristematic_zone | wt | 7.12 | HC |
| SRR1740429 | root_meristematic_zone | wt | 6.74 | HC |
| SRR1740430 | root_meristematic_zone | wt | 7.49 | HC |
| SRR6441554 | seedling | wild_type | 3.60 | HC |
| SRR6441555 | seedling | wild_type | 3.74 | HC |
| SRR2154086 | seedling | wt | 7.31 | HC |
| SRR2154082 | seedling | wt | 4.63 | HC |
| SRR2154083 | seedling | wt | 5.02 | HC |
| SRR2154084 | seedling | wt | 6.14 | HC |
| SRR2154085 | seedling | wt | 4.70 | HC |
| SRR2154087 | seedling | wt | 4.87 | HC |
| SRR3098742 | seedling | wt | 4.15 | HC |
| SRR3098743 | seedling | wt | 3.01 | HC |
| SRR1288364 | shoot | "none,3_days_post_infection" | 4.99 | HC |
| SRR1288370 | shoot | "roots_rot_nematode_(H._oryzae),7_days_post_infection" | 8.79 | HC |
| SRR4841742 | shoot | shoots_of_Meloidogyne_graminicola_infected_7_dai | 6.61 | HC |
| SRR5796940 | shoot | "Control,22C for 10 min" | 4.28 | HC |
| SRR5796942 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.10 | HC |
| SRR5796943 | shoot | "Control,22C for 10 min, then 30C for 10 min" | 4.05 | HC |
| SRR5796944 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.22 | HC |
| SRR5796945 | shoot | "Control, 22C for 10 min, then 30C for 50 min" | 4.25 | HC |
| SRR5796946 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 4.81 | HC |
| SRR5796947 | shoot | "Control,22C for 10 min, then 30C for 1h50 min" | 5.37 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 5.63 | HC |
| SRR5796949 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 6.74 | HC |
| SRR5796950 | shoot | "Heat,42C for 10 min" | 3.74 | HC |
| SRR5796951 | shoot | "Heat,42C for 10 min" | 3.39 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 4.26 | HC |
| SRR5796957 | shoot | "Heat,42C for 10 min, then 30C for 1h50 min" | 3.35 | HC |
| SRR5796958 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 8.31 | HC |
| SRR5796959 | shoot | "Heat,42C for 10 min, then 30C for 9h50 min" | 7.58 | HC |
| SRR5052708 | shoot_apical_meristem | 0_days_after_shift | 8.70 | HC |
| SRR5052709 | shoot_apical_meristem | 0_days_after_shift | 9.46 | HC |
| SRR5052710 | shoot_apical_meristem | 0_days_after_shift | 9.22 | HC |
| SRR5052713 | shoot_apical_meristem | 4_days_after_shift | 10.13 | HC |
| SRR5052719 | shoot_apical_meristem | 8_days_after_shift | 9.30 | HC |
| SRR5052720 | shoot_apical_meristem | 8_days_after_shift | 7.94 | HC |
| SRR5052721 | shoot_apical_meristem | 12_days_after_shift | 9.06 | HC |
| SRR5052723 | shoot_apical_meristem | 12_days_after_shift | 7.74 | HC |
| SRR5052725 | shoot_apical_meristem | 0_days_after_shift | 8.80 | HC |
| SRR5052727 | shoot_apical_meristem | 4_days_after_shift | 8.29 | HC |
| SRR3129121 | spikelet | Wild_type_9522_S3 | 8.51 | HC |
| SRR3129122 | spikelet | Wild_type_9522_S3 | 8.76 | HC |
| SRR3129123 | spikelet | Wild_type_9522_S3 | 8.10 | HC |
| SRR3129124 | spikelet | Wild_type_9522_S5 | 8.13 | HC |
| SRR3129125 | spikelet | Wild_type_9522_S5 | 9.44 | HC |
| SRR3129126 | spikelet | Wild_type_9522_S5 | 8.02 | HC |
| SRR3129127 | spikelet | Wild_type_9522_S7 | 8.31 | HC |
| SRR3129128 | spikelet | Wild_type_9522_S7 | 8.15 | HC |
| SRR3129129 | spikelet | Wild_type_9522_S7 | 7.61 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 5.63 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 4.27 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 4.26 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 4.27 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 3.57 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 3.74 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 4.07 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 3.99 | HC |