| SRR3745125 | anther | wt | 19.04 | HC |
| SRR3745126 | anther | wt | 24.61 | HC |
| SRR3745127 | anther | wt | 22.94 | HC |
| SRR358797 | callus | wt | 9.52 | HC |
| SRR6320473 | carpel | wt | 8.41 | HC |
| SRR6320498 | carpel | wt | 12.43 | HC |
| SRR5560727 | caryopsis | wild_type | 5.58 | HC |
| SRR5560728 | caryopsis | wild_type | 8.34 | HC |
| SRR5560729 | caryopsis | wild_type | 5.26 | HC |
| SRR4947495 | root | control | 38.87 | HC |
| SRR7265400 | coleoptile | 2dA | 47.73 | HC |
| SRR7265401 | coleoptile | 2dA | 44.87 | HC |
| SRR7265402 | coleoptile | 2dA | 41.58 | HC |
| SRR7265403 | coleoptile | 2dN | 35.40 | HC |
| SRR7265404 | coleoptile | 2dN | 38.52 | HC |
| SRR7265405 | coleoptile | 2dN | 35.60 | HC |
| SRR7265406 | coleoptile | 3dA | 39.69 | HC |
| SRR7265407 | coleoptile | 3dA | 32.66 | HC |
| SRR7265408 | coleoptile | 3dA | 20.90 | HC |
| SRR7265409 | coleoptile | 3dN | 36.83 | HC |
| SRR7265410 | coleoptile | 3dN | 37.52 | HC |
| SRR7265411 | coleoptile | 3dN | 34.83 | HC |
| SRR7265412 | coleoptile | 4dA | 16.31 | HC |
| SRR7265413 | coleoptile | 4dA | 22.53 | HC |
| SRR7265414 | coleoptile | 4dA | 22.79 | HC |
| SRR7265415 | coleoptile | 4dN | 30.83 | HC |
| SRR7265416 | coleoptile | 4dN | 30.32 | HC |
| SRR7265417 | coleoptile | 4dN | 30.26 | HC |
| SRR7265418 | coleoptile | 3dN1dA | 39.50 | HC |
| SRR7265419 | coleoptile | 3dN1dA | 35.21 | HC |
| SRR7265420 | coleoptile | 3dN1dA | 37.51 | HC |
| SRR4104639 | crown | "Zn_deficiency,8_days_of_treatment" | 6.46 | HC |
| SRR4104637 | crown | "Zn_deficiency,8_days_of_treatment" | 41.29 | HC |
| SRR4104638 | crown | "Zn_deficiency,8_days_of_treatment" | 40.98 | HC |
| SRR4104647 | crown | "Zn_Efficient,8_days_of_treatment" | 52.55 | HC |
| SRR4104640 | crown | "Zn_deficiency,8_days_of_treatment" | 43.74 | HC |
| SRR4104641 | crown | "Zn_deficiency,8_days_of_treatment" | 37.57 | HC |
| SRR4104642 | crown | "Zn_deficiency,8_days_of_treatment" | 53.69 | HC |
| SRR4104643 | crown | "Zn_Efficient,8_days_of_treatment" | 40.23 | HC |
| SRR4104644 | crown | "Zn_Efficient,8_days_of_treatment" | 39.16 | HC |
| SRR4104648 | crown | "Zn_Efficient,8_days_of_treatment" | 57.37 | HC |
| SRR4104646 | crown | "Zn_Efficient,8_days_of_treatment" | 49.51 | HC |
| SRR7265373 | embryo | dry seed 0 h | 19.28 | HC |
| SRR7265374 | embryo | dry seed 0 h | 18.77 | HC |
| SRR7265375 | embryo | dry seed 0 h | 6.54 | HC |
| SRR7265376 | embryo | 1hA | 19.74 | HC |
| SRR7265377 | embryo | 1hA | 18.96 | HC |
| SRR7265378 | embryo | 1hA | 19.96 | HC |
| SRR7265379 | embryo | 1hN | 17.72 | HC |
| SRR7265380 | embryo | 1hN | 19.84 | HC |
| SRR7265381 | embryo | 1hN | 17.55 | HC |
| SRR7265382 | embryo | 3hA | 25.12 | HC |
| SRR7265383 | embryo | 3hA | 19.42 | HC |
| SRR7265384 | embryo | 3hA | 21.75 | HC |
| SRR7265385 | embryo | 3hN | 20.37 | HC |
| SRR7265386 | embryo | 3hN | 20.98 | HC |
| SRR7265387 | embryo | 3hN | 19.42 | HC |
| SRR7265388 | embryo | 12hA | 42.93 | HC |
| SRR7265389 | embryo | 12hA | 49.63 | HC |
| SRR7265390 | embryo | 12hA | 40.44 | HC |
| SRR7265391 | embryo | 12hN | 32.01 | HC |
| SRR7265392 | embryo | 12hN | 31.55 | HC |
| SRR7265393 | embryo | 12hN | 30.86 | HC |
| SRR7265394 | embryo | 24hA | 46.52 | HC |
| SRR7265395 | embryo | 24hA | 51.88 | HC |
| SRR7265396 | embryo | 24hA | 42.98 | HC |
| SRR7265397 | embryo | 24hN | 37.85 | HC |
| SRR7265398 | embryo | 24hN | 33.59 | HC |
| SRR7265399 | embryo | 24hN | 31.46 | HC |
| SRR2338867 | endosprem | control | 4.72 | HC |
| SRR2338868 | endosprem | high_temperature | 5.46 | HC |
| SRR2338869 | endosprem | high_temperature | 4.93 | HC |
| SRR1213691 | flower | wt | 6.97 | HC |
| SRR8060835 | leaf | wild_type | 22.73 | HC |
| SRR8060836 | leaf | wild_type | 17.81 | HC |
| SRR8060837 | leaf | wild_type | 28.18 | HC |
| SRR8240819 | leaf | wild_type | 2.90 | HC |
| SRR8240820 | leaf | wild_type | 3.18 | HC |
| SRR2922623 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 8.17 | HC |
| SRR2922624 | leaf | Xanthomonas_oryzae_pv._oryzicola_strain_BLS254 | 7.72 | HC |
| SRR1952778 | leaf | 48_hrs_after_inoculation_with_BLS256 | 8.18 | HC |
| SRR1952780 | leaf | 48_hrs_after_inoculation_with_BLS256 | 12.67 | HC |
| SRR1952781 | leaf | 48_hrs_after_inoculation_with_BLS279 | 5.46 | HC |
| SRR1952782 | leaf | 48_hrs_after_inoculation_with_BLS279 | 7.80 | HC |
| SRR1952783 | leaf | 48_hrs_after_inoculation_with_BLS279 | 9.45 | HC |
| SRR1952786 | leaf | 48_hrs_after_inoculation_with_CFBP2286 | 9.32 | HC |
| SRR1952787 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.60 | HC |
| SRR1952788 | leaf | 48_hrs_after_inoculation_with_B8_12 | 7.90 | HC |
| SRR1952789 | leaf | 48_hrs_after_inoculation_with_B8_12 | 10.31 | HC |
| SRR1952790 | leaf | 48_hrs_after_inoculation_with_L8 | 5.74 | HC |
| SRR1952792 | leaf | 48_hrs_after_inoculation_with_L8 | 7.68 | HC |
| SRR1952793 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.05 | HC |
| SRR1952794 | leaf | 48_hrs_after_inoculation_with_RS105 | 7.36 | HC |
| SRR1952795 | leaf | 48_hrs_after_inoculation_with_RS105 | 9.85 | HC |
| SRR1952797 | leaf | 48_hrs_after_inoculation_with_BXOR1 | 8.15 | HC |
| SRR1952799 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 7.54 | HC |
| SRR1952800 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 8.56 | HC |
| SRR1952801 | leaf | 48_hrs_after_inoculation_with_CFBP7331 | 10.82 | HC |
| SRR1952802 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 10.66 | HC |
| SRR1952803 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 6.39 | HC |
| SRR1952804 | leaf | 48_hrs_after_inoculation_with_CFBP7341 | 7.60 | HC |
| SRR1952805 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.23 | HC |
| SRR1952806 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 8.89 | HC |
| SRR1952807 | leaf | 48_hrs_after_inoculation_with_CFBP7342 | 6.78 | HC |
| SRR1952808 | leaf | 48_hrs_after_mock_inoculation | 6.37 | HC |
| SRR1952810 | leaf | 48_hrs_after_mock_inoculation | 6.30 | HC |
| SRR1761788 | leaf | "wild_type,drought,2" | 5.85 | HC |
| SRR1761780 | leaf | "wild_type,drought,1" | 5.85 | HC |
| SRR1761528 | leaf | drought | 5.85 | HC |
| SRR504365 | leaf | wt | 5.77 | HC |
| SRR6417964 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 5.24 | HC |
| SRR6417965 | leaf | Xanthomonas_oryzae_pv._Oryzae_MAI1_inoculated_24hpi | 4.64 | HC |
| SRR6417969 | leaf | H2O_control | 3.60 | HC |
| SRR8611902 | leaf | Non-inoculated | 3.59 | HC |
| SRR8611910 | leaf | Inoculated with Pyricularia oryzae | 4.15 | HC |
| SRR8611911 | leaf | Inoculated with Pyricularia oryzae | 4.25 | HC |
| SRR6216699 | leaf | nontransgenic rice plant | 3.49 | HC |
| SRR6502097 | leaf | 100 mM NaCl | 11.41 | HC |
| SRR6502098 | leaf | 100 mM NaCl | 13.89 | HC |
| SRR6502099 | leaf | 100 mM NaCl | 18.79 | HC |
| SRR6502100 | leaf | control | 13.68 | HC |
| SRR6502101 | leaf | control | 10.78 | HC |
| SRR6502102 | leaf | control | 10.90 | HC |
| SRR5856927 | leaf | control | 25.96 | HC |
| SRR5856928 | leaf | control | 30.38 | HC |
| SRR5856929 | leaf | control | 30.43 | HC |
| SRR5856930 | leaf | salt | 23.93 | HC |
| SRR5856931 | leaf | salt | 24.56 | HC |
| SRR5856932 | leaf | salt | 26.99 | HC |
| SRR5856933 | leaf | control | 34.68 | HC |
| SRR5856934 | leaf | control | 29.94 | HC |
| SRR5856935 | leaf | control | 29.66 | HC |
| SRR5856936 | leaf | salt | 22.02 | HC |
| SRR5856937 | leaf | salt | 25.37 | HC |
| SRR5856938 | leaf | salt | 21.28 | HC |
| SRR6053392 | leaf | ethanol solvent (untreated control) | 34.32 | HC |
| SRR6053393 | leaf | ethanol solvent (untreated control) | 53.55 | HC |
| SRR6053394 | leaf | ethanol solvent (untreated control) | 57.69 | HC |
| SRR6053395 | leaf | gibberellic acid (GA) | 45.85 | HC |
| SRR6053396 | leaf | gibberellic acid (GA) | 68.97 | HC |
| SRR6053397 | leaf | gibberellic acid (GA) | 64.56 | HC |
| SRR6053398 | leaf | Paclobutrazol (PB) | 41.54 | HC |
| SRR6053399 | leaf | Paclobutrazol (PB) | 33.43 | HC |
| SRR6053400 | leaf | Paclobutrazol (PB) | 49.16 | HC |
| SRR6168973 | leaf | none (control) | 13.74 | HC |
| SRR6168974 | leaf | none (control) | 14.62 | HC |
| SRR6168975 | leaf | none (control) | 9.32 | HC |
| SRR6168976 | leaf | 0.5% Na2CO3 solution for 36h | 51.09 | HC |
| SRR6168977 | leaf | 0.5% Na2CO3 solution for 36h | 59.73 | HC |
| SRR6168978 | leaf | 0.5% Na2CO3 solution for 36h | 34.32 | HC |
| SRR6168980 | leaf | none (control) | 2.14 | HC |
| SRR6168981 | leaf | none (control) | 5.25 | HC |
| SRR6168982 | leaf | 0.5% Na2CO3 solution for 36h | 31.93 | HC |
| SRR6168983 | leaf | 0.5% Na2CO3 solution for 36h | 19.05 | HC |
| SRR6168984 | leaf | 0.5% Na2CO3 solution for 36h | 25.04 | HC |
| SRR8582888 | panicle | AM | 3.94 | HC |
| SRR5110429 | panicle | Dawn | 67.10 | HC |
| SRR5110430 | panicle | Dawn | 79.77 | HC |
| SRR5110431 | panicle | Dawn | 64.90 | HC |
| SRR5110432 | panicle | Dawn | 45.14 | HC |
| SRR4947496 | root | control | 32.54 | HC |
| SRR5110433 | panicle | Dawn + 3.5h | 53.05 | HC |
| SRR5110434 | panicle | Dawn + 3.5h | 52.78 | HC |
| SRR5110435 | panicle | Dawn + 3.5h | 48.38 | HC |
| SRR5110436 | panicle | Dawn + 3.5h | 51.98 | HC |
| SRR5110437 | panicle | Dawn + 7h | 67.67 | HC |
| SRR5110438 | panicle | Dawn + 7h | 70.72 | HC |
| SRR5110439 | panicle | Dawn + 7h | 63.11 | HC |
| SRR5110440 | panicle | Dawn + 7h | 59.20 | HC |
| SRR5110441 | panicle | Dawn + 10.5h | 75.33 | HC |
| SRR5110442 | panicle | Dawn + 10.5h | 65.52 | HC |
| SRR5110443 | panicle | Dawn + 10.5h | 53.89 | HC |
| SRR5110444 | panicle | Dawn + 10.5h | 74.95 | HC |
| SRR5110445 | panicle | Dusk | 81.75 | HC |
| SRR5110446 | panicle | Dusk | 76.08 | HC |
| SRR5110447 | panicle | Dusk | 77.73 | HC |
| SRR5110448 | panicle | Dusk | 78.44 | HC |
| SRR5110449 | panicle | Dawn + 14h | 110.80 | HC |
| SRR5110450 | panicle | Dawn + 14h | 44.15 | HC |
| SRR5110451 | panicle | Dawn + 14h | 73.09 | HC |
| SRR5110452 | panicle | Dawn + 14h | 73.17 | HC |
| SRR5110453 | panicle | Dawn + 17.5h | 37.78 | HC |
| SRR5110454 | panicle | Dawn + 17.5h | 36.26 | HC |
| SRR5110455 | panicle | Dawn + 17.5h | 40.93 | HC |
| SRR5110456 | panicle | Dawn + 17.5h | 65.12 | HC |
| SRR5110457 | panicle | Dawn + 21h | 46.53 | HC |
| SRR5110458 | panicle | Dawn + 21h | 34.14 | HC |
| SRR5110459 | panicle | Dawn + 21h | 49.55 | HC |
| SRR5110460 | panicle | Dawn + 21h | 62.70 | HC |
| SRR1213696 | endosprem | wt(milk grains) | 6.18 | HC |
| SRR1633182 | panicle | WT | 7.04 | HC |
| SRR1633185 | panicle | WT | 9.91 | HC |
| SRR5278374 | pistil | "Balilla,S1" | 3.72 | HC |
| SRR5278375 | pistil | "Balilla,S1" | 3.81 | HC |
| SRR5278376 | pistil | "Balilla,S2" | 6.42 | HC |
| SRR5278377 | pistil | "Balilla,S2" | 6.34 | HC |
| SRR5278378 | pistil | "Balilla,S3" | 18.09 | HC |
| SRR5126148 | root | "mock,1_day" | 5.62 | HC |
| SRR5126150 | root | "auxin(50CM_2,4_D),1_day" | 5.96 | HC |
| SRR5126152 | root | "auxin(50CM_2,4_D),1_day" | 4.85 | HC |
| SRR5126153 | root | "mock,7_days" | 8.76 | HC |
| SRR5126155 | root | "mock,7_days" | 4.83 | HC |
| SRR5126157 | root | "mock,7_days" | 5.98 | HC |
| SRR5126159 | root | "auxin(50CM_2,4_D),7_days" | 10.55 | HC |
| SRR5126161 | root | "auxin(50CM_2,4_D),7_days" | 7.56 | HC |
| SRR5126163 | root | "auxin(50CM_2,4_D),7_days" | 6.29 | HC |
| SRR5126165 | root | "mock,14_days" | 5.35 | HC |
| SRR5126167 | root | "mock,14_days" | 8.32 | HC |
| SRR5126169 | root | "mock,14_days" | 9.24 | HC |
| SRR5126171 | root | "auxin(50CM_2,4_D),14_days" | 7.23 | HC |
| SRR5126173 | root | "auxin(50CM_2,4_D),14_days" | 9.83 | HC |
| SRR5126175 | root | "auxin(50CM_2,4_D),14_days" | 12.95 | HC |
| SRR3472897 | root | nontransgenic_rice_plant | 13.54 | HC |
| SRR3472900 | root | nontransgenic_rice_plant | 20.62 | HC |
| SRR1213694 | root | wt | 4.16 | HC |
| SRR4947478 | root | control | 30.73 | HC |
| SRR4947479 | root | control | 36.32 | HC |
| SRR4947480 | root | control | 29.57 | HC |
| SRR4947481 | root | control | 33.07 | HC |
| SRR4947482 | root | Al | 26.65 | HC |
| SRR4947483 | root | Al | 32.02 | HC |
| SRR4947484 | root | Al | 36.59 | HC |
| SRR4947485 | root | Al | 29.03 | HC |
| SRR4947487 | root | control | 33.74 | HC |
| SRR4947488 | root | control | 25.55 | HC |
| SRR4947489 | root | control | 34.23 | HC |
| SRR4947490 | root | Al | 33.87 | HC |
| SRR4947491 | root | Al | 45.60 | HC |
| SRR4947492 | root | Al | 32.35 | HC |
| SRR4947493 | root | Al | 26.92 | HC |
| SRR4947494 | root | control | 38.37 | HC |
| SRR4947497 | root | control | 40.39 | HC |
| SRR4947498 | root | Al | 53.30 | HC |
| SRR4947499 | root | Al | 40.85 | HC |
| SRR4947500 | root | Al | 33.86 | HC |
| SRR4947501 | root | Al | 49.01 | HC |
| SRR4947502 | root | control | 39.17 | HC |
| SRR4947503 | root | control | 32.22 | HC |
| SRR4947504 | root | control | 37.55 | HC |
| SRR4947505 | root | control | 36.93 | HC |
| SRR4947506 | root | Al | 30.38 | HC |
| SRR4947507 | root | Al | 53.68 | HC |
| SRR4947508 | root | Al | 29.63 | HC |
| SRR4947509 | root | Al | 34.18 | HC |
| SRR6502091 | root | 100 mM NaCl | 6.90 | HC |
| SRR6502092 | root | 100 mM NaCl | 7.35 | HC |
| SRR6502094 | root | control | 6.23 | HC |
| SRR6502096 | root | control | 6.51 | HC |
| SRR6502103 | root | 100 mM NaCl | 18.41 | HC |
| SRR6502104 | root | 100 mM NaCl | 15.55 | HC |
| SRR6502105 | root | 100 mM NaCl | 18.96 | HC |
| SRR6502106 | root | control | 14.62 | HC |
| SRR6502107 | root | control | 12.49 | HC |
| SRR6502108 | root | control | 16.17 | HC |
| SRR1740434 | root_differentiation_zone | wt | 17.55 | HC |
| SRR1740435 | root_differentiation_zone | wt | 23.13 | HC |
| SRR1740436 | root_differentiation_zone | wt | 28.64 | HC |
| SRR1740431 | root_elongation_zone | wt | 15.01 | HC |
| SRR1740432 | root_elongation_zone | wt | 44.40 | HC |
| SRR1740433 | root_elongation_zone | wt | 30.93 | HC |
| SRR1740428 | root_meristematic_zone | wt | 23.35 | HC |
| SRR1740429 | root_meristematic_zone | wt | 31.53 | HC |
| SRR1740430 | root_meristematic_zone | wt | 40.71 | HC |
| SRR6441554 | seedling | wild_type | 3.97 | HC |
| SRR6441555 | seedling | wild_type | 3.87 | HC |
| SRR2154086 | seedling | wt | 13.26 | HC |
| SRR2154082 | seedling | wt | 58.20 | HC |
| SRR2154083 | seedling | wt | 56.73 | HC |
| SRR2154084 | seedling | wt | 72.80 | HC |
| SRR2154085 | seedling | wt | 58.06 | HC |
| SRR2154087 | seedling | wt | 8.37 | HC |
| SRR3098741 | seedling | wt | 4.51 | HC |
| SRR3098742 | seedling | wt | 3.90 | HC |
| SRR3098743 | seedling | wt | 8.80 | HC |
| SRR2857719 | seedling | drought_stress_0h | 10.46 | HC |
| SRR2857720 | seedling | drought_stress_1h | 8.32 | HC |
| SRR2857721 | seedling | drought_stress_6h | 6.10 | HC |
| SRR358794 | seedling | wt | 7.86 | HC |
| SRR3950244 | shoot | Drought_during_3_days;Fr13_inoculated | 5.30 | HC |
| SRR3950245 | shoot | Drought_during_3_days;Fr13_inoculated | 4.34 | HC |
| SRR3950246 | shoot | Drought_during_3_days;Fr13_inoculated | 5.82 | HC |
| SRR3950247 | shoot | No_DIS;Fr13_inoculated | 6.35 | HC |
| SRR3950248 | shoot | No_DIS;Fr13_inoculated | 8.63 | HC |
| SRR3950249 | shoot | No_DIS;Fr13_inoculated | 6.85 | HC |
| SRR3950252 | shoot | Drought_during_3_days;_mock_inoculated | 6.38 | HC |
| SRR5796948 | shoot | "Control,22C for 10 min, then 30C for 9h50 min" | 4.81 | HC |
| SRR5796953 | shoot | "Heat,42C for 10 min, then 30C for 10 min" | 3.13 | HC |
| SRR1617553 | shoot_apical_meristem | no collect | 30.96 | HC |
| SRR1617554 | shoot_apical_meristem | no collect | 37.37 | HC |
| SRR1617556 | shoot_apical_meristem | no collect | 29.32 | HC |
| SRR1617557 | shoot_apical_meristem | no collect | 21.93 | HC |
| SRR1617558 | shoot_apical_meristem | no collect | 27.39 | HC |
| SRR1617559 | shoot_apical_meristem | no collect | 23.17 | HC |
| SRR7760291 | spikelet | control condition (29C) for 7 hrs | 30.19 | HC |
| SRR7760292 | spikelet | control condition (29C) for 7 hrs | 40.14 | HC |
| SRR7760293 | spikelet | control condition (29C) for 7 hrs | 33.13 | HC |
| SRR7760294 | spikelet | high temperature treatment (38C) for 7 hrs | 34.90 | HC |
| SRR7760295 | spikelet | high temperature treatment (38C) for 7 hrs | 40.96 | HC |
| SRR7760296 | spikelet | high temperature treatment (38C) for 7 hrs | 41.33 | HC |
| SRR7760297 | spikelet | control condition (29C) for 7 hrs | 40.36 | HC |
| SRR7760298 | spikelet | control condition (29C) for 7 hrs | 44.39 | HC |
| SRR7760299 | spikelet | control condition (29C) for 7 hrs | 32.20 | HC |
| SRR7760300 | spikelet | high temperature treatment (38C) for 7 hrs | 49.15 | HC |
| SRR7760301 | spikelet | high temperature treatment (38C) for 7 hrs | 40.34 | HC |
| SRR7760302 | spikelet | high temperature treatment (38C) for 7 hrs | 41.81 | HC |