RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0401	XM_015780228.2	+	550	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0402	XM_015780228.2	-	569	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0403	XM_015780228.2	-	590	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0404	XM_015780228.2	+	592	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/N
Osa-phasi01g0405	XM_015780228.2	-	611	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0406	XM_015780228.2	+	613	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0407	XM_015780228.2	-	632	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0408	XM_015780228.2	+	634	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/Y
Osa-phasi01g0409	XM_015780228.2	+	655	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0410	XM_015780228.2	-	674	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0411	XM_015780228.2	+	676	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/N
Osa-phasi01g0412	XM_015780228.2	-	695	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0413	XM_015780228.2	+	697	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/Y
Osa-phasi01g0414	XM_015780228.2	+	718	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	Y/N
Osa-phasi01g0415	XM_015780228.2	-	737	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0416	XM_015780228.2	-	758	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0417	XM_015780228.2	-	779	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0418	XM_015780228.2	-	800	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0419	XM_015780228.2	-	821	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0420	XM_015780228.2	-	884	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X1	N/N
Osa-phasi01g0421	XM_015780237.2	+	1362	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0422	XM_015780237.2	-	1381	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0423	XM_015780237.2	+	1383	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0424	XM_015780237.2	-	1402	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0425	XM_015780237.2	+	1404	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0426	XM_015780237.2	-	1423	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0427	XM_015780237.2	+	1425	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0428	XM_015780237.2	-	1444	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0429	XM_015780237.2	+	1446	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0430	XM_015780237.2	-	1465	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0431	XM_015780237.2	+	1467	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0432	XM_015780237.2	-	1486	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/N
Osa-phasi01g0433	XM_015780237.2	+	1488	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0434	XM_015780237.2	+	1509	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0435	XM_015780237.2	-	1528	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0436	XM_015780237.2	-	1549	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0437	XM_015780237.2	+	1551	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/N
Osa-phasi01g0438	XM_015780237.2	-	1570	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0439	XM_015780237.2	+	1572	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0440	XM_015780237.2	-	1591	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0441	XM_015780237.2	+	1593	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/Y
Osa-phasi01g0442	XM_015780237.2	+	1614	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0443	XM_015780237.2	-	1633	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0444	XM_015780237.2	+	1635	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/N
Osa-phasi01g0445	XM_015780237.2	-	1654	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0446	XM_015780237.2	+	1656	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/Y
Osa-phasi01g0447	XM_015780237.2	+	1677	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	Y/N
Osa-phasi01g0448	XM_015780237.2	-	1696	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0449	XM_015780237.2	-	1717	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0450	XM_015780237.2	-	1738	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N