RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi12g0923	XR_001542347.2	+	3770	LOC107279811	Chr12	+	uncharacterized LOC107279811	N/N
Osa-phasi12g0924	XR_001542347.2	-	3810	LOC107279811	Chr12	+	uncharacterized LOC107279811	N/N
Osa-phasi12g0925	XR_003239936.1	+	714	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0926	XR_003239936.1	+	735	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0927	XR_003239936.1	-	754	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0928	XR_003239936.1	+	756	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0929	XR_003239936.1	-	775	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0930	XR_003239936.1	-	796	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0931	XR_003239936.1	+	798	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0932	XR_003239936.1	+	819	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0933	XR_003239936.1	-	838	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0934	XR_003239936.1	+	840	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0935	XR_003239936.1	+	861	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0936	XR_003239936.1	-	880	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0937	XR_003239936.1	+	882	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0938	XR_003239936.1	-	901	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0939	XR_003239936.1	-	943	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0940	XR_003239936.1	+	945	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0941	XR_003239936.1	-	964	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0942	XR_003239936.1	+	966	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0943	XR_003239936.1	-	1006	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0944	XR_003239936.1	+	1050	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0945	XR_003239936.1	+	1155	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0946	XR_003239936.1	+	1964	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0947	XR_003239936.1	+	1985	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0948	XR_003239936.1	-	2025	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0949	XR_003239936.1	+	2027	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0950	XR_003239936.1	-	2046	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0951	XR_003239936.1	+	2069	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0952	XR_003239936.1	+	2090	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0953	XR_003239936.1	-	2109	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0954	XR_003239936.1	+	2111	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/N
Osa-phasi12g0955	XR_003239936.1	-	2130	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0956	XR_003239936.1	-	2151	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0957	XR_003239936.1	-	2172	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0958	XR_003239936.1	-	2214	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0959	XR_003239936.1	-	2235	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0960	XR_003239936.1	-	2256	LOC112937384	Chr12	+	uncharacterized LOC112937384	N/Y
Osa-phasi12g0961	XM_015763812.1	+	4396	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0962	XM_015763812.1	-	4436	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0963	XM_015763812.1	-	4541	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0964	XM_015763812.1	-	4562	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0965	XM_015763812.1	+	4564	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0966	XM_015763812.1	-	4583	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0967	XM_015763812.1	+	4669	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0968	XM_015763812.1	-	4688	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0969	XM_015763812.1	+	4690	LOC107279689	Chr12	-	uncharacterized LOC107279689	N/N
Osa-phasi12g0970	XM_015764902.2	-	1383	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0971	XM_015764902.2	+	1385	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0972	XM_015764902.2	-	1394	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0973	XM_015764902.2	-	1425	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0974	XM_015764902.2	+	1427	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0975	XM_015764902.2	-	1446	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0976	XM_015764902.2	-	1457	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0977	XM_015764902.2	-	1478	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0978	XM_015764902.2	+	1490	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0979	XM_015764902.2	-	1499	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0980	XM_015764902.2	-	1530	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0981	XM_015764902.2	-	1541	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0982	XM_015764902.2	+	1553	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0983	XM_015764902.2	+	1574	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0984	XM_015764902.2	-	1583	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0985	XM_015764902.2	+	1595	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X1	N/N
Osa-phasi12g0986	XM_015764903.2	-	1377	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0987	XM_015764903.2	+	1379	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0988	XM_015764903.2	-	1388	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0989	XM_015764903.2	-	1419	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0990	XM_015764903.2	+	1421	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0991	XM_015764903.2	-	1440	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0992	XM_015764903.2	-	1451	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0993	XM_015764903.2	-	1472	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0994	XM_015764903.2	+	1484	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0995	XM_015764903.2	-	1493	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0996	XM_015764903.2	-	1524	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0997	XM_015764903.2	-	1535	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0998	XM_015764903.2	+	1547	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g0999	XM_015764903.2	+	1568	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g1000	XM_015764903.2	-	1577	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g1001	XM_015764903.2	+	1589	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X2	N/N
Osa-phasi12g1002	XM_015764904.2	-	839	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1003	XM_015764904.2	+	841	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1004	XM_015764904.2	-	850	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1005	XM_015764904.2	-	881	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1006	XM_015764904.2	+	883	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1007	XM_015764904.2	-	902	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1008	XM_015764904.2	-	913	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1009	XM_015764904.2	-	934	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1010	XM_015764904.2	+	946	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1011	XM_015764904.2	-	955	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1012	XM_015764904.2	-	986	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1013	XM_015764904.2	-	997	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1014	XM_015764904.2	+	1009	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1015	XM_015764904.2	+	1030	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1016	XM_015764904.2	-	1039	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1017	XM_015764904.2	+	1051	LOC4352601	Chr12	+	uncharacterized LOC4352601, transcript variant X3	N/N
Osa-phasi12g1018	XR_003240100.1	-	223	LOC112937463	Chr12	+	uncharacterized LOC112937463	N/N
Osa-phasi12g1019	XR_003240100.1	+	225	LOC112937463	Chr12	+	uncharacterized LOC112937463	N/N
Osa-phasi12g1020	XR_003240100.1	-	232	LOC112937463	Chr12	+	uncharacterized LOC112937463	N/N
Osa-phasi12g1021	XR_003240100.1	-	244	LOC112937463	Chr12	+	uncharacterized LOC112937463	N/N
Osa-phasi12g1022	XR_003240100.1	+	246	LOC112937463	Chr12	+	uncharacterized LOC112937463	N/N