RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0600	XM_015766138.2	+	1736	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0601	XM_015766138.2	-	1755	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi05g0226	XM_015782683.2	-	980	LOC4339003	Chr5	-	laccase-13	N/N
Osa-phasi01g0602	XM_015766138.2	-	1776	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0603	XM_015766138.2	+	1778	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0604	XM_015766138.2	-	1797	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0605	XM_015766138.2	-	1818	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0606	XM_015766138.2	-	1839	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0607	XM_015766138.2	-	1860	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0608	XM_015766138.2	-	1881	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0609	XM_015766138.2	+	1904	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0610	XM_015766138.2	+	1946	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0611	XM_015766138.2	-	2119	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0612	XM_015766138.2	-	2140	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0613	XM_015766138.2	-	2161	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0614	XM_015766138.2	-	2203	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0615	XM_015766138.2	-	2245	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0616	XM_015766138.2	-	2308	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0617	XM_015766138.2	+	2310	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0618	XM_015766138.2	+	2331	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0619	XM_015766139.2	+	294	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0620	XM_015766139.2	-	313	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0621	XM_015766139.2	+	315	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0622	XM_015766139.2	+	336	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0623	XM_015766139.2	+	420	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0624	XM_015766139.2	+	441	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0625	XM_015766139.2	-	502	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0626	XM_015766139.2	+	504	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0627	XM_015766139.2	+	525	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0628	XM_015766139.2	-	586	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0629	XM_015766139.2	-	607	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0630	XM_015766139.2	-	628	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0631	XM_015766139.2	-	649	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/Y
Osa-phasi01g0632	XM_015766139.2	+	651	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0633	XM_015766139.2	+	672	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0634	XM_015766139.2	+	714	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0635	XM_015766139.2	-	838	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0636	XM_015766139.2	+	840	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0637	XM_015766139.2	-	859	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0638	XM_015766139.2	-	880	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0639	XM_015766139.2	+	882	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0640	XM_015766139.2	-	901	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0641	XM_015766139.2	-	922	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0642	XM_015766139.2	-	943	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0643	XM_015766139.2	-	964	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0644	XM_015766139.2	-	985	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0645	XM_015766139.2	+	1008	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0646	XM_015766139.2	+	1050	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0647	XM_015766139.2	-	1223	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N
Osa-phasi01g0648	XM_015766139.2	-	1244	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X4	N/N