RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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total numbers: 9239

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Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0550	XM_015766136.2	-	1419	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X1	N/N
Osa-phasi01g0551	XM_015766136.2	+	1421	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X1	N/N
Osa-phasi01g0552	XM_015766136.2	+	1442	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X1	N/N
Osa-phasi01g0553	XM_015766137.2	+	289	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0554	XM_015766137.2	-	308	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0555	XM_015766137.2	+	310	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0556	XM_015766137.2	+	331	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0557	XM_015766137.2	+	415	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0558	XM_015766137.2	+	436	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0559	XM_015766137.2	-	497	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0560	XM_015766137.2	+	499	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0561	XM_015766137.2	+	520	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0562	XM_015766137.2	-	581	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0563	XM_015766137.2	-	602	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0564	XM_015766137.2	-	623	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0565	XM_015766137.2	-	644	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/Y
Osa-phasi01g0566	XM_015766137.2	+	646	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0567	XM_015766137.2	+	667	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0568	XM_015766137.2	+	709	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0569	XM_015766137.2	-	833	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0570	XM_015766137.2	+	835	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0571	XM_015766137.2	-	854	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0572	XM_015766137.2	-	875	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0573	XM_015766137.2	+	877	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0574	XM_015766137.2	-	896	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0575	XM_015766137.2	-	917	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0576	XM_015766137.2	-	938	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0577	XM_015766137.2	-	959	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0578	XM_015766137.2	-	980	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0579	XM_015766137.2	+	1003	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0580	XM_015766137.2	+	1045	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0581	XM_015766137.2	-	1218	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0582	XM_015766137.2	-	1239	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0583	XM_015766137.2	-	1260	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0584	XM_015766137.2	-	1302	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0585	XM_015766137.2	-	1344	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0586	XM_015766137.2	-	1407	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0587	XM_015766137.2	+	1409	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0588	XM_015766137.2	+	1430	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X2	N/N
Osa-phasi01g0589	XM_015766138.2	+	1337	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0590	XM_015766138.2	+	1400	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0591	XM_015766138.2	+	1421	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0592	XM_015766138.2	-	1482	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0593	XM_015766138.2	-	1503	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0594	XM_015766138.2	-	1524	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0595	XM_015766138.2	-	1545	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/Y
Osa-phasi01g0596	XM_015766138.2	+	1547	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0597	XM_015766138.2	+	1568	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0598	XM_015766138.2	+	1610	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N
Osa-phasi01g0599	XM_015766138.2	-	1734	LOC4324193	Chr1	-	uncharacterized LOC4324193, transcript variant X3	N/N