RiceNCexp:Browse

phasiRNAs Basic Information

We used the phasiRNA analysis tool PhasiRNAnalyzer to predict the phasiRNA of 307 rice samples (including different tissues and treatments), and integrated the prediction results of the 355 samples to obtain the mature phasiRNAs.

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Fliter by Chromosome:

Fliter by DE/TSE:

total numbers: 9239

rows per page

Name	PHAS gene	Strand on PHAS gene	Start on PHAS gene	Gene	Chromosome	Strand	Annotation	DE/TSE
Osa-phasi01g0451	XM_015780237.2	-	1759	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0452	XM_015780237.2	-	1780	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi05g0225	XM_015782683.2	+	940	LOC4339003	Chr5	-	laccase-13	N/N
Osa-phasi01g0453	XM_015780237.2	-	1843	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X2	N/N
Osa-phasi01g0454	XM_015780246.2	+	1357	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0455	XM_015780246.2	-	1376	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0456	XM_015780246.2	+	1378	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0457	XM_015780246.2	-	1397	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0458	XM_015780246.2	+	1399	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0459	XM_015780246.2	-	1418	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0460	XM_015780246.2	+	1420	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0461	XM_015780246.2	-	1439	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0462	XM_015780246.2	+	1441	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0463	XM_015780246.2	-	1460	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0464	XM_015780246.2	+	1462	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0465	XM_015780246.2	-	1481	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/N
Osa-phasi01g0466	XM_015780246.2	+	1483	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0467	XM_015780246.2	+	1504	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0468	XM_015780246.2	-	1523	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0469	XM_015780246.2	-	1544	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0470	XM_015780246.2	+	1546	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/N
Osa-phasi01g0471	XM_015780246.2	-	1565	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0472	XM_015780246.2	+	1567	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0473	XM_015780246.2	-	1586	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0474	XM_015780246.2	+	1588	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/Y
Osa-phasi01g0475	XM_015780246.2	+	1609	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0476	XM_015780246.2	-	1628	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0477	XM_015780246.2	+	1630	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/N
Osa-phasi01g0478	XM_015780246.2	-	1649	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0479	XM_015780246.2	+	1651	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/Y
Osa-phasi01g0480	XM_015780246.2	+	1672	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	Y/N
Osa-phasi01g0481	XM_015780246.2	-	1691	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0482	XM_015780246.2	-	1712	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0483	XM_015780246.2	-	1733	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0484	XM_015780246.2	-	1754	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0485	XM_015780246.2	-	1775	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0486	XM_015780246.2	-	1838	LOC4326495	Chr1	+	uncharacterized LOC4326495, transcript variant X3	N/N
Osa-phasi01g0487	XR_003242415.1	+	471	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X1	N/N
Osa-phasi01g0488	XR_003242415.1	-	490	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X1	N/N
Osa-phasi01g0489	XR_003242415.1	-	511	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X1	N/N
Osa-phasi01g0490	XR_003242415.1	+	555	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X1	N/N
Osa-phasi01g0491	XR_003242416.1	+	471	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X2	N/N
Osa-phasi01g0492	XR_003242416.1	-	490	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X2	N/N
Osa-phasi01g0493	XR_003242416.1	-	511	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X2	N/N
Osa-phasi01g0494	XR_003242416.1	+	555	LOC112939034	Chr1	+	uncharacterized LOC112939034, transcript variant X2	N/N
Osa-phasi01g0495	XM_015792825.2	+	3123	LOC107281819	Chr1	-	uncharacterized LOC107281819	N/N
Osa-phasi01g0496	XM_015792825.2	-	3142	LOC107281819	Chr1	-	uncharacterized LOC107281819	N/N
Osa-phasi01g0497	XM_015792825.2	+	3144	LOC107281819	Chr1	-	uncharacterized LOC107281819	N/N
Osa-phasi01g0498	XM_015792825.2	-	3163	LOC107281819	Chr1	-	uncharacterized LOC107281819	N/N
Osa-phasi01g0499	XR_003242912.1	+	696	LOC112939311	Chr1	-	uncharacterized LOC112939311	N/Y