RiceNCexp:Network

Home Browse BLAST Analysis Download Help

Note

Please enter the name in the input box.

Note

Please select the first layer target point type.

Note

The query cannot exceed 10 lines, otherwise the running speed is too slow and the generated co-expression network is too complicated.

Three-Layer Network:

Start Point Type:

microRNA phasiRNA Long non-coding RNA PHAS Gene Coding-Gene

Library:

Anatomy (11) Total Datasets (116) Detail

Layer:

1 2 3

Target Point Type (1st Layer):

microRNA phasiRNA Long non-coding RNA PHAS Gene Protein-Coding Gene

Target Point Type (2nd Layer):

microRNA phasiRNA Long non-coding RNA PHAS Gene Protein-Coding Gene

Target Point Type (3rd Layer):

microRNA phasiRNA Long non-coding RNA PHAS Gene Protein-Coding Gene

PCC cutoff (1st Layer):

PCC cutoff (2nd Layer):

PCC cutoff (3rd Layer):

Correlation (1st Layer):

Positive Negative Both

Correlation (2nd Layer):

Positive Negative Both

Correlation (3rd Layer):

Positive Negative Both

maximum of nodes (1st Layer):

top 5 top 10 top 20

1st layer of the network is sorted according to the value of PCC

maximum of nodes (2nd Layer):

top 5 top 10 top 20

2nd layer of the network is sorted according to the value of PCC

maximum of nodes (3rd Layer):

top 5 top 10 top 20

3rd layer of the network is sorted according to the value of PCC

Start Point(s):

In order to ensure the running speed and the readability of the co-expressed network, a maximum of 10 queries(lines) can be entered

miRNA: e.g. Examples

Crop Bioinformatics Group, College of Agriculture, NanJing Agricultural University
Contact us at huangji@njau.edu.cn (Ji Huang) or 2020201005@stu.njau.edu.cn (Baoyi Zhang)
Chrome, Firefox, 360Browser, Edge are recommended.