#Please import the downloaded file into Microsoft Excel or other speadsheet software miRNA_Acc. Target_Acc. Expectation UPE$ miRNA_start miRNA_end Target_start Target_end miRNA_aligned_fragment Target_aligned_fragment Inhibition Target_Desc. Multiplicity sly-miR160a Solyc11g069500.2.1 0.0 21.851 1 21 1837 1857 UGCCUGGCUCCCUGUAUGCCA AGGCAUACAGGGAGCCAGGCA Cleavage Auxin Response Factor 10A 1 sly-miR169b Solyc07g007480.2.1 0.0 21.063 1 21 1533 1553 UAGCCAAGGAUGACUUGCCUG CAGGCAAGUCAUCCUUGGCUA Cleavage Protein DETOXIFICATION (AHRD V3.3 *-* M1D0T9_SOLTU) 1 sly-miR169d Solyc07g007480.2.1 0.0 21.063 1 21 1533 1553 UAGCCAAGGAUGACUUGCCUA CAGGCAAGUCAUCCUUGGCUA Cleavage Protein DETOXIFICATION (AHRD V3.3 *-* M1D0T9_SOLTU) 1 sly-miR169e-5p Solyc07g007480.2.1 0.0 21.063 1 22 1532 1553 UAGCCAAGGAUGACUUGCCUUU GCAGGCAAGUCAUCCUUGGCUA Cleavage Protein DETOXIFICATION (AHRD V3.3 *-* M1D0T9_SOLTU) 1 sly-miR319c-3p Solyc03g119530.3.1 0.0 20.439 1 21 2505 2525 UUGGACUGAAGGGAGCUCCUU UAGGAGCUCCCUUCAGUCCAA Cleavage LOB domain protein 40 (AHRD V3.3 *** K7VSW9_SOLTU) 1 sly-miR5300 Solyc04g005650.2.1 0.0 16.163 1 22 355 376 UCCCCAGUCCAGGCAUUCCAAC GUUGGAAUGCCUGGACUGGGGA Cleavage Mitochondrial substrate carrier family protein (AHRD V3.3 *** A0A061FTE7_THECC) 1 sly-miR6024 Solyc01g088430.3.1 0.0 22.88 1 22 3498 3519 UUUUAGCAAGAGUUGUUUUACC GGUAAAACAACUCUUGCUAAAA Cleavage Fatty acid hydroxylase superfamily protein (AHRD V3.3 *** A0A072TKE8_MEDTR) 1 sly-miR9474-3p Solyc08g078320.3.1 0.0 16.727 1 22 5385 5406 UUUUGUUCGCAGAUACUACAGU ACUGUAGUAUCUGCGAACAAAA Cleavage E3 ubiquitin-protein ligase HOS1 (AHRD V3.3 *** G7JXE3_MEDTR) 1 sly-miR9474-5p Solyc08g078320.3.1 0.0 18.406 1 22 5684 5705 UGUAGAAGUCAUGAAUAAAAUG CAUUUUAUUCAUGACUUCUACA Cleavage E3 ubiquitin-protein ligase HOS1 (AHRD V3.3 *** G7JXE3_MEDTR) 1 sly-miR160a Solyc09g007810.3.1 0.5 24.765 1 21 2031 2051 UGCCUGGCUCCCUGUAUGCCA UGGCAUGCAGGGAGCCAGGCA Cleavage Auxin Response Factor 16A 1 sly-miR160a Solyc11g013480.2.1 0.5 20.89 1 21 1447 1467 UGCCUGGCUCCCUGUAUGCCA GGGCAUGCAGGGAGCCAGGCA Cleavage Auxin Response Factor 17 1 sly-miR164a-5p Solyc07g062840.3.1 0.5 14.574 1 21 1361 1381 UGGAGAAGCAGGGCACGUGCA AGCACGUGCCCUGUUUCUCCA Cleavage goblet 1 sly-miR164b-5p Solyc07g062840.3.1 0.5 14.574 1 21 1361 1381 UGGAGAAGCAGGGCACGUGCA AGCACGUGCCCUGUUUCUCCA Cleavage goblet 1 sly-miR171a Solyc01g090950.3.1 0.5 24.367 1 21 972 992 UGAUUGAGCCGUGCCAAUAUC GAUAUUGGCGCGGCUCAAUCA Cleavage Transcription factor GRAS (AHRD V3.3 *** A0A103XI66_CYNCS) 1 sly-miR171a Solyc08g078800.2.1 0.5 18.525 1 21 1352 1372 UGAUUGAGCCGUGCCAAUAUC GAUAUUGGCGCGGCUCAAUCA Cleavage GRAS family transcription factor (AHRD V3.3 *** A0A061GBD8_THECC) 1 sly-miR172a Solyc11g072600.2.1 0.5 12.759 1 21 1274 1294 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCU Cleavage APETALA2d 1 sly-miR172a Solyc04g049800.3.1 0.5 10.036 1 21 1106 1126 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCU Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A072VBB0_MEDTR) 1 sly-miR172b Solyc11g072600.2.1 0.5 12.759 1 21 1274 1294 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCU Cleavage APETALA2d 1 sly-miR172b Solyc04g049800.3.1 0.5 10.036 1 21 1106 1126 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCU Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A072VBB0_MEDTR) 1 sly-miR397 Solyc07g049460.3.1 0.5 12.382 1 20 838 857 AUUGAGUGCAGCGUUGAUGA UCAUCAACGCUGCGCUCAAU Cleavage laccase 1 sly-miR5303 Solyc03g097670.3.1 0.5 17.784 1 21 6696 6716 UUUUUGAAGAGUUCGAGCAAC UUUGCUCGGACUCUUCAAAAA Cleavage ATP/DNA binding protein (AHRD V3.3 *** AT3G48770.2) 1 sly-miR9472-3p Solyc01g080150.3.1 0.5 12.203 1 21 639 659 UUCACAAUCUCUGCUGAAAAA GUUUUCAGCAGAGGUUGUGAA Cleavage tRNA dimethylallyltransferase 1 sly-miR156a Solyc04g045560.3.1 1.0 15.732 1 21 939 959 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 3 1 sly-miR156a Solyc05g015510.3.1 1.0 19.373 1 21 2555 2575 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 10 1 sly-miR156a Solyc10g078700.2.1 1.0 18.612 1 21 3614 3634 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter binding protein 15 1 sly-miR156b Solyc04g045560.3.1 1.0 15.732 1 21 939 959 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 3 1 sly-miR156b Solyc05g015510.3.1 1.0 19.373 1 21 2555 2575 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 10 1 sly-miR156b Solyc10g078700.2.1 1.0 18.612 1 21 3614 3634 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter binding protein 15 1 sly-miR156c Solyc04g045560.3.1 1.0 15.732 1 21 939 959 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 3 1 sly-miR156c Solyc05g015510.3.1 1.0 19.373 1 21 2555 2575 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter-binding protein 10 1 sly-miR156c Solyc10g078700.2.1 1.0 18.612 1 21 3614 3634 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAA Cleavage Squamosa promoter binding protein 15 1 sly-miR156d-5p Solyc04g045560.3.1 1.0 17.481 1 20 939 958 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein 3 1 sly-miR156d-5p Solyc05g015840.3.1 1.0 17.277 1 20 900 919 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 13 1 sly-miR156d-5p Solyc05g012040.3.1 1.0 10.664 1 20 1459 1478 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6b 1 sly-miR156d-5p Solyc12g038520.2.1 1.0 11.598 1 20 1431 1450 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6c 1 sly-miR156d-5p Solyc05g015510.3.1 1.0 17.999 1 20 2555 2574 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein 10 1 sly-miR156d-5p Solyc10g078700.2.1 1.0 20.437 1 20 3614 3633 UGACAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 15 1 sly-miR160a Solyc10g086130.2.1 1.0 17.637 1 21 1347 1367 UGCCUGGCUCCCUGUAUGCCA UGGUAUGCAGGGAGCCAGGCA Cleavage Auxin Response Factor 16B 1 sly-miR164a-5p Solyc07g066330.3.1 1.0 9.988 1 21 909 929 UGGAGAAGCAGGGCACGUGCA AGCAAGUGCCCUGCUUCUCCA Cleavage NAC domain-containing protein (AHRD V3.3 *** W0C8Y8_9FABA) 1 sly-miR164b-5p Solyc07g066330.3.1 1.0 9.988 1 21 909 929 UGGAGAAGCAGGGCACGUGCA AGCAAGUGCCCUGCUUCUCCA Cleavage NAC domain-containing protein (AHRD V3.3 *** W0C8Y8_9FABA) 1 sly-miR171d Solyc08g078800.2.1 1.0 16.529 1 20 1350 1369 UUGAGCCGCGCCAAUAUCAC AUGAUAUUGGCGCGGCUCAA Cleavage GRAS family transcription factor (AHRD V3.3 *** A0A061GBD8_THECC) 1 sly-miR171d Solyc01g090950.3.1 1.0 23.069 1 20 970 989 UUGAGCCGCGCCAAUAUCAC GGGAUAUUGGCGCGGCUCAA Cleavage Transcription factor GRAS (AHRD V3.3 *** A0A103XI66_CYNCS) 1 sly-miR171e Solyc01g090950.3.1 1.0 23.069 1 21 969 989 UUGAGCCGCGUCAAUAUCUCU AGGGAUAUUGGCGCGGCUCAA Cleavage Transcription factor GRAS (AHRD V3.3 *** A0A103XI66_CYNCS) 1 sly-miR1917 Solyc10g085570.3.1 1.0 14.853 1 21 2789 2809 AUUAAUAAAGAGUGCUAAAGU UCUUUGGCAUUCUUUAUUAAU Cleavage CTR1-like protein kinase-4 1 sly-miR1919c-5p Solyc08g067580.2.1 1.0 17.11 1 21 452 472 UGUCGCAGAUGACUUUCGCCC ACGCGAAAGUCAUCUGCGACA Cleavage phytochrome interacting factor 3 (AHRD V3.3 --* AT1G09530.6) 1 sly-miR1919c-5p Solyc08g067560.2.1 1.0 16.221 1 21 1207 1227 UGUCGCAGAUGACUUUCGCCC ACGCGAAAGUCAUCUGCGACA Cleavage SUMO activating enzyme 1B (AHRD V3.3 --* AT5G50680.2) 1 sly-miR319a Solyc03g119530.3.1 1.0 19.674 1 20 2507 2526 CUUGGACUGAAGGGAGCUCC GGAGCUCCCUUCAGUCCAAU Cleavage LOB domain protein 40 (AHRD V3.3 *** K7VSW9_SOLTU) 1 sly-miR319b Solyc03g119530.3.1 1.0 20.439 1 21 2505 2525 UUGGACUGAAGGGAGCUCCCU UAGGAGCUCCCUUCAGUCCAA Cleavage LOB domain protein 40 (AHRD V3.3 *** K7VSW9_SOLTU) 1 sly-miR394-5p Solyc05g015520.3.1 1.0 18.464 1 20 1248 1267 UUGGCAUUCUGUCCACCUCC GGAGGUUGACAGAAUGCCAA Cleavage F-box family protein (AHRD V3.3 *** B8Y9B5_PONTR) 1 sly-miR397 Solyc05g043360.2.1 1.0 7.921 1 20 951 970 AUUGAGUGCAGCGUUGAUGA UAAUCAACGCUGCACUCAAU Cleavage Laccase (AHRD V3.3 *** A0A067JKU4_JATCU) 1 sly-miR397 Solyc10g076830.2.1 1.0 15.639 1 20 1015 1034 AUUGAGUGCAGCGUUGAUGA UAAUCAACGCUGCACUCAAU Cleavage Laccase (AHRD V3.3 *** P93366_TOBAC) 1 sly-miR397 Solyc06g082260.3.1 1.0 16.686 1 20 720 739 AUUGAGUGCAGCGUUGAUGA UGAUCAACGCUGCACUCAAU Cleavage Laccase (AHRD V3.3 *** A0A1B0YZD2_DAUCA) 1 sly-miR399 Solyc02g078210.3.1 1.0 15.836 1 21 956 976 UGCCAAAGGAGAGUUGCCCUA UAGGGCAAAUCUCCUUUGGCA Cleavage Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *** U5FV88_POPTR) 2 sly-miR482a Solyc11g008140.2.1 1.0 11.101 1 22 1224 1245 UUUCCAAUUCCACCCAUUCCUA GUGGAGUGGGUGGAAUUGGAGA Cleavage Pectate lyase (AHRD V3.3 *** K4D575_SOLLC) 1 sly-miR482d-3p Solyc06g005410.3.1 1.0 15.878 1 22 592 613 UUUCCUAUUCCACCCAUGCCAA UUGGCAUUGGUGGAAUAGGAAA Cleavage Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 --* G7KIF8_MEDTR) 2 sly-miR482d-3p Solyc06g005410.3.1 1.0 15.569 1 22 1639 1660 UUUCCUAUUCCACCCAUGCCAA AUGGCAUUGGUGGAAUAGGAAA Cleavage Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 --* G7KIF8_MEDTR) 2 sly-miR5303 Solyc11g012890.2.1 1.0 20.473 1 21 2700 2720 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGACUCUUCAGAAA Cleavage Auxin efflux carrier component (AHRD V3.3 --* A0A075IGY3_9SPER) 1 sly-miR5303 Solyc10g085210.2.1 1.0 19.896 1 21 968 988 UUUUUGAAGAGUUCGAGCAAC CUUGUUCGAAUUCUUCAAAAA Cleavage transcription factor-like protein (AHRD V3.3 *** AT1G58330.1) 2 sly-miR5303 Solyc11g066940.2.1 1.0 20.021 1 21 1067 1087 UUUUUGAAGAGUUCGAGCAAC CUUGCUCGGACUCUUUAAAAA Cleavage Wall-associated receptor kinase-like 20 (AHRD V3.3 --* A0A061E5G3_THECC) 1 sly-miR6022 Solyc01g005730.3.1 1.0 21.585 1 21 1190 1210 UGGAAGGGAGAAUAUCCAGGA UCCUGGAUAUUCUCCCUUCCU Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1) 1 sly-miR6023 Solyc01g014143.1.1 1.0 8.611 1 22 534 555 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAAACUAUUUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1) 1 sly-miR6024 Solyc05g008070.3.1 1.0 20.681 1 22 547 568 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCUAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR6024 Solyc10g051050.2.1 1.0 21.519 1 22 944 965 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCUAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR156a Solyc05g012040.3.1 1.5 10.604 1 21 1459 1479 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAG Cleavage Squamosa promoter binding protein 6b 1 sly-miR156b Solyc05g012040.3.1 1.5 10.604 1 21 1459 1479 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAG Cleavage Squamosa promoter binding protein 6b 1 sly-miR156c Solyc05g012040.3.1 1.5 10.604 1 21 1459 1479 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAG Cleavage Squamosa promoter binding protein 6b 1 sly-miR156d-5p Solyc07g062980.3.1 1.5 19.368 1 20 443 462 UGACAGAAGAGAGUGAGCAC AUGCUUACUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein, putative (AHRD V3.3 *** B9T4B7_RICCO) 1 sly-miR156e-5p Solyc04g045560.3.1 1.5 17.481 1 20 939 958 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein 3 1 sly-miR156e-5p Solyc05g015840.3.1 1.5 17.277 1 20 900 919 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 13 1 sly-miR156e-5p Solyc05g012040.3.1 1.5 10.664 1 20 1459 1478 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6b 1 sly-miR156e-5p Solyc12g038520.2.1 1.5 11.598 1 20 1431 1450 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6c 1 sly-miR156e-5p Solyc05g015510.3.1 1.5 17.999 1 20 2555 2574 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein 10 1 sly-miR156e-5p Solyc10g078700.2.1 1.5 20.437 1 20 3614 3633 UGAUAGAAGAGAGUGAGCAC GUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 15 1 sly-miR162 Solyc10g005130.3.1 1.5 18.811 1 21 3432 3453 UCGAUAA-ACCUCUGCAUCCAG CUGGAUGCAGAGGUAUUAUCGA Cleavage Dicer-like 1 1 sly-miR166a Solyc12g044410.2.1 1.5 19.251 1 21 1033 1053 UCGGACCAGGCUUCAUUCCCC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR166a Solyc03g120910.3.1 1.5 19.503 1 21 1219 1239 UCGGACCAGGCUUCAUUCCCC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR166b Solyc12g044410.2.1 1.5 19.251 1 21 1033 1053 UCGGACCAGGCUUCAUUCCCC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR166b Solyc03g120910.3.1 1.5 19.503 1 21 1219 1239 UCGGACCAGGCUUCAUUCCCC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR166c-3p Solyc12g044410.2.1 1.5 19.251 1 21 1033 1053 UCGGACCAGGCUUCAUUCCUC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR166c-3p Solyc03g120910.3.1 1.5 19.503 1 21 1219 1239 UCGGACCAGGCUUCAUUCCUC CUGGAAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q76CL1_ZINVI) 1 sly-miR171b Solyc08g078800.2.1 1.5 16.529 1 21 1349 1369 UUGAGCCGUGCCAAUAUCACG AAUGAUAUUGGCGCGGCUCAA Cleavage GRAS family transcription factor (AHRD V3.3 *** A0A061GBD8_THECC) 1 sly-miR171b Solyc11g013150.1.1 1.5 24.025 1 21 378 398 UUGAGCCGUGCCAAUAUCACG AGUGAUAUUGGUUCGGCUCAA Translation GRAS family transcription factor (AHRD V3.3 *** A0A061FHT3_THECC) 1 sly-miR171b Solyc01g090950.3.1 1.5 23.069 1 21 969 989 UUGAGCCGUGCCAAUAUCACG AGGGAUAUUGGCGCGGCUCAA Cleavage Transcription factor GRAS (AHRD V3.3 *** A0A103XI66_CYNCS) 1 sly-miR171d Solyc11g013150.1.1 1.5 24.025 1 20 379 398 UUGAGCCGCGCCAAUAUCAC GUGAUAUUGGUUCGGCUCAA Translation GRAS family transcription factor (AHRD V3.3 *** A0A061FHT3_THECC) 1 sly-miR172a Solyc03g044300.3.1 1.5 14.552 1 21 1366 1386 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2a 1 sly-miR172a Solyc09g007260.3.1 1.5 10.962 1 21 1624 1644 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCG Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** G7IU38_MEDTR) 1 sly-miR172a Solyc02g093150.3.1 1.5 16.079 1 21 1560 1580 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2c 1 sly-miR172a Solyc02g064960.3.1 1.5 16.904 1 21 1764 1784 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2b 1 sly-miR172a Solyc10g084340.2.1 1.5 14.846 1 21 2182 2202 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCG Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A072VME8_MEDTR) 1 sly-miR172a Solyc06g075510.3.1 1.5 10.907 1 21 1348 1368 AGAAUCUUGAUGAUGCUGCAU CGGCAGCAUCAUCAGGAUUCU Cleavage APETALA2e 1 sly-miR172b Solyc03g044300.3.1 1.5 14.552 1 21 1366 1386 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2a 1 sly-miR172b Solyc09g007260.3.1 1.5 10.962 1 21 1624 1644 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCG Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** G7IU38_MEDTR) 1 sly-miR172b Solyc02g093150.3.1 1.5 16.079 1 21 1560 1580 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2c 1 sly-miR172b Solyc02g064960.3.1 1.5 16.904 1 21 1764 1784 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCC Cleavage APETALA2b 1 sly-miR172b Solyc10g084340.2.1 1.5 14.846 1 21 2182 2202 AGAAUCUUGAUGAUGCUGCAU CUGCAGCAUCAUCAGGAUUCG Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** A0A072VME8_MEDTR) 1 sly-miR172b Solyc06g075510.3.1 1.5 10.907 1 21 1348 1368 AGAAUCUUGAUGAUGCUGCAU CGGCAGCAUCAUCAGGAUUCU Cleavage APETALA2e 1 sly-miR1918 Solyc09g065430.3.1 1.5 11.198 1 22 702 723 UGUUGGUGAGAGUUCGAUUCUC GAGAAUCGAACUCUCACAAACA Cleavage Lipid transfer protein (AHRD V3.3 *** G7K520_MEDTR) 1 sly-miR395a Solyc11g066140.2.1 1.5 12.894 1 22 2828 2849 CUGAAGUGUUUGGGGGAACUCC AAAGUUCCUCCAAACACUUCAA Cleavage P-hydroxybenzoic acid efflux pump subunit aaeB (AHRD V3.3 *** A0A061GW63_THECC) 1 sly-miR395b Solyc11g066140.2.1 1.5 12.894 1 22 2828 2849 CUGAAGUGUUUGGGGGAACUCC AAAGUUCCUCCAAACACUUCAA Cleavage P-hydroxybenzoic acid efflux pump subunit aaeB (AHRD V3.3 *** A0A061GW63_THECC) 1 sly-miR397 Solyc02g062650.3.1 1.5 17.78 1 20 970 989 AUUGAGUGCAGCGUUGAUGA UUGUCAAUGCUGCACUCAAU Cleavage Laccase (AHRD V3.3 *** I1J8U1_SOYBN) 1 sly-miR397 Solyc09g011045.1.1 1.5 7.436 1 20 727 746 AUUGAGUGCAGCGUUGAUGA UGAUCAACGCUGCACUUAAU Cleavage Laccase (AHRD V3.3 *** M1AHJ4_SOLTU) 1 sly-miR397 Solyc09g010993.1.1 1.5 8.28 1 20 1196 1215 AUUGAGUGCAGCGUUGAUGA UGAUCAACGCUGCACUUAAU Cleavage Laccase (AHRD V3.3 *-* M1AHJ4_SOLTU) 1 sly-miR397 Solyc06g076330.3.1 1.5 14.659 1 20 2613 2632 AUUGAGUGCAGCGUUGAUGA UAAUCAAUGCUGCACUCAAU Cleavage Laccase (AHRD V3.3 *** M1CZK5_SOLTU) 1 sly-miR403-3p Solyc02g069260.3.1 1.5 18.771 1 21 3356 3376 CUAGAUUCACGCACAAGCUCG GGAGUUUGUGCGUGAAUCUAA Cleavage Argonaute2a 1 sly-miR482b Solyc02g036270.3.1 1.5 12.267 1 22 681 702 UCUUGCCUACACCGCCCAUGCC GGUAUGGGUGGUGUAGGUAAGA Cleavage Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *-* AT5G38350.1) 1 sly-miR482b Solyc05g008070.3.1 1.5 21.303 1 22 532 553 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGUAUAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR482b Solyc04g009120.2.1 1.5 21.183 1 22 601 622 UCUUGCCUACACCGCCCAUGCC GGCAUGGGUGGUUUAGGCAAGA Translation Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 1 sly-miR482c Solyc11g006530.2.1 1.5 18.804 1 22 526 547 UCUUGCCAAUACCGCCCAUUCC GGAAUGGGCGGUAUAGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR482c Solyc11g006630.1.1 1.5 21.57 1 22 532 553 UCUUGCCAAUACCGCCCAUUCC GGCAUGGGCGGUAUUGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR482e-3p Solyc08g076000.3.1 1.5 24.722 1 22 853 874 UCUUUCCUACUCCUCCCAUACC GGUAUGGGGGGACUAGGAAAGA Translation NBS-LRR resistance protein (AHRD V3.3 *** B6E013_SOLBU) 1 sly-miR482e-3p Solyc08g075630.3.1 1.5 24.851 1 22 745 766 UCUUUCCUACUCCUCCCAUACC GGUAUGGGGGGAUUAGGAAAGA Translation NBS-LRR resistance protein (AHRD V3.3 *** B6E013_SOLBU) 1 sly-miR5303 Solyc10g085210.2.1 1.5 14.646 1 21 1029 1049 UUUUUGAAGAGUUCGAGCAAC GUUGUUUGAACUCUUUAAAAA Cleavage transcription factor-like protein (AHRD V3.3 *** AT1G58330.1) 2 sly-miR5303 Solyc11g007360.1.1 1.5 12.108 1 21 705 725 UUUUUGAAGAGUUCGAGCAAC GUUGCUCAGACUCUUCAAAAA Cleavage F-box family protein (AHRD V3.3 *-* D7L2W6_ARALL) 1 sly-miR5303 Solyc03g097450.3.1 1.5 23.06 1 21 1952 1972 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGUCUCUUCAAAAA Cleavage SWI/SNF complex subunit SWI3A (AHRD V3.3 *** W9QCB3_9ROSA) 1 sly-miR5303 Solyc11g066260.2.1 1.5 15.219 1 21 2196 2216 UUUUUGAAGAGUUCGAGCAAC GUUGCUCCGACUCUUCAAAAA Cleavage Vacuolar protein sorting-associated protein 24 like 1 (AHRD V3.3 *** A0A0B2QEZ9_GLYSO) 1 sly-miR5303 Solyc06g052080.3.1 1.5 12.964 1 21 848 868 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGACCCUUCAAAAA Translation RNA-binding family protein (AHRD V3.3 *-* B9GTK9_POPTR) 1 sly-miR5303 Solyc07g018290.3.1 1.5 16.394 1 21 1547 1567 UUUUUGAAGAGUUCGAGCAAC AUUACUCGAAUUCUUCAAAAA Cleavage AP2-like ethylene-responsive transcription factor (AHRD V3.3 *** G7JVD9_MEDTR) 1 sly-miR5303 Solyc04g051870.2.1 1.5 11.052 1 21 1880 1900 UUUUUGAAGAGUUCGAGCAAC AUUGCUCGUACUUUUCAAAAA Cleavage Galactose oxidase/kelch repeat superfamily protein (AHRD V3.3 *** AT4G39550.1) 1 sly-miR6022 Solyc01g008410.2.1 1.5 19.869 1 21 943 963 UGGAAGGGAGAAUAUCCAGGA UCCUGGAUAUUCUCCCUCCCA Cleavage LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1) 1 sly-miR6023 Solyc01g005865.1.1 1.5 15.692 1 22 47 68 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAGACUCGUUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 --* AT4G08850.2) 1 sly-miR6023 Solyc01g005775.1.1 1.5 19.188 1 22 194 215 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUGUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.2) 1 sly-miR6024 Solyc11g069020.2.1 1.5 21.99 1 22 514 535 UUUUAGCAAGAGUUGUUUUACC GGUAAAACCACUCUUGCUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6026 Solyc02g070260.3.1 1.5 11.459 1 22 1364 1385 UUCUUGGCUAGAGUUGUAUUGC AUAAUAUGACUCUAGUCAAGAA Cleavage Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103XCI4_CYNCS) 1 sly-miR9472-3p Solyc11g040080.1.1 1.5 15.381 1 21 88 108 UUCACAAUCUCUGCUGAAAAA CAUUUCAGCAGGGAUUGUGAA Cleavage LOW QUALITY:Protein Ycf2 (AHRD V3.3 *-* YCF2_SOLLC) 1 sly-miR9472-5p Solyc03g053100.3.1 1.5 12.844 1 21 1411 1432 UUUCAG-UAGACGUUGUGAAUA CAUUCACAACGUCUAUCUGAAA Cleavage Kinesin-like protein (AHRD V3.3 *** A0A0V0IXU5_SOLCH) 1 sly-miR156a Solyc05g015840.3.1 2.0 17.455 1 21 900 920 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 13 1 sly-miR156a Solyc12g038520.2.1 2.0 10.968 1 21 1431 1451 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6c 1 sly-miR156a Solyc02g070280.3.1 2.0 22.233 1 21 649 669 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUGUCUUCUGUUAC Cleavage Cationic amino acid transporter, putative (AHRD V3.3 *** B9SKU5_RICCO) 1 sly-miR156a Solyc07g053810.3.1 2.0 6.907 1 21 729 749 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 4 1 sly-miR156a Solyc03g114850.3.1 2.0 13.244 1 21 1732 1752 UUGACAGAAGAUAGAGAGCAC AUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6a 1 sly-miR156b Solyc05g015840.3.1 2.0 17.455 1 21 900 920 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 13 1 sly-miR156b Solyc12g038520.2.1 2.0 10.968 1 21 1431 1451 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6c 1 sly-miR156b Solyc02g070280.3.1 2.0 22.233 1 21 649 669 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUGUCUUCUGUUAC Cleavage Cationic amino acid transporter, putative (AHRD V3.3 *** B9SKU5_RICCO) 1 sly-miR156b Solyc07g053810.3.1 2.0 6.907 1 21 729 749 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 4 1 sly-miR156b Solyc03g114850.3.1 2.0 13.244 1 21 1732 1752 UUGACAGAAGAUAGAGAGCAC AUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6a 1 sly-miR156c Solyc05g015840.3.1 2.0 17.455 1 21 900 920 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 13 1 sly-miR156c Solyc12g038520.2.1 2.0 10.968 1 21 1431 1451 UUGACAGAAGAUAGAGAGCAC GUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6c 1 sly-miR156c Solyc02g070280.3.1 2.0 22.233 1 21 649 669 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUGUCUUCUGUUAC Cleavage Cationic amino acid transporter, putative (AHRD V3.3 *** B9SKU5_RICCO) 1 sly-miR156c Solyc07g053810.3.1 2.0 6.907 1 21 729 749 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 4 1 sly-miR156c Solyc03g114850.3.1 2.0 13.244 1 21 1732 1752 UUGACAGAAGAUAGAGAGCAC AUGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 6a 1 sly-miR156d-5p Solyc09g097880.3.1 2.0 18.043 1 20 909 929 UGACAGAAGAGAGU-GAGCAC GUGCUCGAUUCUCUUCUGUUA Cleavage DNA topoisomerase (AHRD V3.3 *** K4CWW0_SOLLC) 1 sly-miR156d-5p Solyc07g053810.3.1 2.0 7.07 1 20 729 748 UGACAGAAGAGAGUGAGCAC UUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 4 1 sly-miR156d-5p Solyc03g114850.3.1 2.0 13.34 1 20 1732 1751 UGACAGAAGAGAGUGAGCAC AUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6a 1 sly-miR156e-5p Solyc07g062980.3.1 2.0 19.368 1 20 443 462 UGAUAGAAGAGAGUGAGCAC AUGCUUACUCUCUUCUGUCA Cleavage Squamosa promoter-binding protein, putative (AHRD V3.3 *** B9T4B7_RICCO) 1 sly-miR156e-5p Solyc01g105270.3.1 2.0 17.728 1 20 883 902 UGAUAGAAGAGAGUGAGCAC GUUCUCAUUCUCUUCUAUUA Cleavage LeTH2tobamovirus multiplication 1 homolog 2 1 sly-miR156e-5p Solyc10g005450.2.1 2.0 15.164 1 20 494 513 UGAUAGAAGAGAGUGAGCAC GUGCUUACUCUCGUUUAUCA Cleavage Equilibrative nucleoside transporter family protein (AHRD V3.3 *** B9H200_POPTR) 1 sly-miR159 Solyc01g009070.3.1 2.0 21.371 1 21 1836 1856 UUUGGAUUGAAGGGAGCUCUA UGGAGCUCCCUUCACUCCAAA Cleavage gamyb-like 1 1 sly-miR159 Solyc07g062750.3.1 2.0 14.284 1 21 1814 1834 UUUGGAUUGAAGGGAGCUCUA UAGAGUUCCUUUUAAUCCAAG Cleavage Polynucleotidyl transferase ribonuclease H-like superfamily protein (AHRD V3.3 *-* A0A0G4APF7_9ROSI) 1 sly-miR159 Solyc10g019260.2.1 2.0 18.692 1 21 187 207 UUUGGAUUGAAGGGAGCUCUA UGGAGCUCCAUUCGAUCCAAA Cleavage R2R3MYB transcription factor 120 1 sly-miR159 Solyc01g090530.2.1 2.0 17.712 1 21 1104 1124 UUUGGAUUGAAGGGAGCUCUA UGGAGCUCCAUUCGAUCCAAA Cleavage R2R3MYB transcription factor 104 1 sly-miR164a-3p Solyc09g082560.3.1 2.0 8.291 1 20 1 20 CAUGUGCCUGUUUUCCCCAU AUGGGGAAAACAGGUAGAUG Cleavage SUN-like protein 26 1 sly-miR164a-5p Solyc01g090590.3.1 2.0 24.721 1 21 1539 1559 UGGAGAAGCAGGGCACGUGCA UGCAUGUGCCCAGCUUCUUCA Translation alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT2G44970.3) 1 sly-miR164a-5p Solyc03g115850.3.1 2.0 11.725 1 21 1236 1256 UGGAGAAGCAGGGCACGUGCA GCCACGUGCACUGCUUCUCCA Cleavage NAC domain-containing protein 1 sly-miR164a-5p Solyc06g069710.3.1 2.0 5.692 1 21 873 893 UGGAGAAGCAGGGCACGUGCA GCCACGUGCACUGCUUCUCCA Cleavage NAC domain protein, (AHRD V3.3 *** A0A061FWI7_THECC) 1 sly-miR164b-5p Solyc01g090590.3.1 2.0 24.721 1 21 1539 1559 UGGAGAAGCAGGGCACGUGCA UGCAUGUGCCCAGCUUCUUCA Translation alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT2G44970.3) 1 sly-miR164b-5p Solyc03g115850.3.1 2.0 11.725 1 21 1236 1256 UGGAGAAGCAGGGCACGUGCA GCCACGUGCACUGCUUCUCCA Cleavage NAC domain-containing protein 1 sly-miR164b-5p Solyc06g069710.3.1 2.0 5.692 1 21 873 893 UGGAGAAGCAGGGCACGUGCA GCCACGUGCACUGCUUCUCCA Cleavage NAC domain protein, (AHRD V3.3 *** A0A061FWI7_THECC) 1 sly-miR166a Solyc02g069830.3.1 2.0 19.296 1 21 748 768 UCGGACCAGGCUUCAUUCCCC UUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166a Solyc02g024070.3.1 2.0 21.121 1 21 1229 1249 UCGGACCAGGCUUCAUUCCCC UUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166a Solyc11g069470.2.1 2.0 23.445 1 21 1605 1625 UCGGACCAGGCUUCAUUCCCC CUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI) 1 sly-miR166b Solyc02g069830.3.1 2.0 19.296 1 21 748 768 UCGGACCAGGCUUCAUUCCCC UUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166b Solyc02g024070.3.1 2.0 21.121 1 21 1229 1249 UCGGACCAGGCUUCAUUCCCC UUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166b Solyc11g069470.2.1 2.0 23.445 1 21 1605 1625 UCGGACCAGGCUUCAUUCCCC CUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI) 1 sly-miR166c-3p Solyc11g069470.2.1 2.0 23.445 1 21 1605 1625 UCGGACCAGGCUUCAUUCCUC CUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H962_ZINVI) 1 sly-miR169a Solyc07g007480.2.1 2.0 21.063 1 21 1533 1553 CAGCCAAGGAUGACUUGCCGG CAGGCAAGUCAUCCUUGGCUA Cleavage Protein DETOXIFICATION (AHRD V3.3 *-* M1D0T9_SOLTU) 1 sly-miR169b Solyc12g009050.2.1 2.0 21.342 1 21 1409 1429 UAGCCAAGGAUGACUUGCCUG CAGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169c Solyc07g007480.2.1 2.0 21.063 1 21 1533 1553 CAGCCAAGGAUGACUUGCCGA CAGGCAAGUCAUCCUUGGCUA Cleavage Protein DETOXIFICATION (AHRD V3.3 *-* M1D0T9_SOLTU) 1 sly-miR169d Solyc12g009050.2.1 2.0 21.342 1 21 1409 1429 UAGCCAAGGAUGACUUGCCUA CAGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169e-5p Solyc12g009050.2.1 2.0 21.342 1 22 1408 1429 UAGCCAAGGAUGACUUGCCUUU GCAGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR171a Solyc02g085600.1.1 2.0 19.998 1 21 585 605 UGAUUGAGCCGUGCCAAUAUC GAUACUGGCACGCCUCAAUCA Translation Transcription factor GRAS (AHRD V3.3 *** A0A103YGV0_CYNCS) 1 sly-miR1918 Solyc12g013710.2.1 2.0 16.681 1 22 1445 1466 UGUUGGUGAGAGUUCGAUUCUC UAGAAUCGAGCGCUUACCAACA Translation light dependent NADH:protochlorophyllide oxidoreductase 1 1 sly-miR1918 Solyc01g104620.3.1 2.0 7.601 1 22 67 88 UGUUGGUGAGAGUUCGAUUCUC UGGAAUCAAACUCUUAUCAACA Cleavage Class II aaRS and biotin synthetases superfamily protein (AHRD V3.3 --* AT3G62120.3) 1 sly-miR1919c-5p Solyc12g017620.1.1 2.0 17.005 1 21 287 307 UGUCGCAGAUGACUUUCGCCC ACGCGAAAGCCAUCUGCGACA Cleavage LOW QUALITY:purple acid phosphatase 8 (AHRD V3.3 --* AT2G01890.2) 1 sly-miR319c-5p Solyc01g109080.3.1 2.0 17.778 1 21 9384 9404 AGAGCUUCCUUCAGCCCACUC GAGUGAGUUGAAGGAGGCUCU Cleavage Serine/threonine-protein kinase SMG1 (AHRD V3.3 *** A0A0B2PF15_GLYSO) 1 sly-miR390a-5p Solyc04g005390.2.1 2.0 21.739 1 21 796 816 AAGCUCAGGAGGGAUAGCACC GGUGUGAUCCCUUCUGAGCUU Cleavage Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103YAE5_CYNCS) 1 sly-miR390a-5p Solyc04g079120.3.1 2.0 18.491 1 21 620 640 AAGCUCAGGAGGGAUAGCACC AGUGCUAUUCCUCCUGAUCUU Cleavage Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G47380.1) 1 sly-miR395a Solyc04g054730.3.1 2.0 13.578 1 22 207 228 CUGAAGUGUUUGGGGGAACUCC AGAGUUCUCCGGAACACUUCAG Cleavage Sulfate transporter (AHRD V3.3 *** A7YGJ3_POPCN) 2 sly-miR395a Solyc10g081660.2.1 2.0 15.611 1 22 161 182 CUGAAGUGUUUGGGGGAACUCC UGGGUUCCUCCAAAGACUUCAG Cleavage sucrose phosphatase AF493563 1 sly-miR395b Solyc04g054730.3.1 2.0 13.578 1 22 207 228 CUGAAGUGUUUGGGGGAACUCC AGAGUUCUCCGGAACACUUCAG Cleavage Sulfate transporter (AHRD V3.3 *** A7YGJ3_POPCN) 2 sly-miR395b Solyc10g081660.2.1 2.0 15.611 1 22 161 182 CUGAAGUGUUUGGGGGAACUCC UGGGUUCCUCCAAAGACUUCAG Cleavage sucrose phosphatase AF493563 1 sly-miR397 Solyc06g048860.2.1 2.0 13.175 1 20 620 639 AUUGAGUGCAGCGUUGAUGA UUAUCAAUGCUGCACUCAAC Cleavage Laccase (AHRD V3.3 *** A0A022PYV8_ERYGU) 1 sly-miR397 Solyc06g076760.2.1 2.0 15.83 1 20 680 699 AUUGAGUGCAGCGUUGAUGA UCAUCAAUGCUGCACUAAAU Cleavage Laccase 1a 1 sly-miR397 Solyc09g014240.3.1 2.0 15.811 1 20 798 817 AUUGAGUGCAGCGUUGAUGA UAAUCAACGCUGCACUCAAC Cleavage Laccase (AHRD V3.3 *** P93366_TOBAC) 1 sly-miR397 Solyc03g095220.3.1 2.0 16.323 1 20 331 350 AUUGAGUGCAGCGUUGAUGA UCAUCAACGGUGAACUCAAU Translation Translocase of chloroplast (AHRD V3.3 *** A0A0V0I1D8_SOLCH) 1 sly-miR399 Solyc02g078210.3.1 2.0 21.108 1 21 899 919 UGCCAAAGGAGAGUUGCCCUA CUGGGCAAAUCUCCUUUGGCA Cleavage Ubiquitin-conjugating enzyme family protein (AHRD V3.3 *** U5FV88_POPTR) 2 sly-miR477-3p Solyc10g079160.1.1 2.0 17.586 1 22 793 814 AGUUCUUGUAGGGUGAGACAAC UAUGUUUCACCCUACGAGGAUU Cleavage Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *** AT2G39120.1) 1 sly-miR482a Solyc04g007320.2.1 2.0 21.199 1 22 1110 1131 UUUCCAAUUCCACCCAUUCCUA UUGGAAUGAGUGGAGUUGGGAA Cleavage Disease resistance protein (TIR-NBS-LRR class), putative (AHRD V3.3 *** Q2HUD1_MEDTR) 1 sly-miR482a Solyc01g102920.3.1 2.0 14.713 1 22 635 656 UUUCCAAUUCCACCCAUUCCUA GUGGUAUUGGUGGAAUUGGAAA Cleavage Disease resistance protein (TIR-NBS-LRR class), putative (AHRD V3.3 *** A0A072U6U6_MEDTR) 1 sly-miR482b Solyc12g017800.2.1 2.0 24.453 1 22 1104 1125 UCUUGCCUACACCGCCCAUGCC GGUAUGGGCGGUAUAGGUAAGA Translation NBS-LRR class disease resistance protein (AHRD V3.3 *-* G8E3T3_SESIN) 1 sly-miR482b Solyc11g065780.2.1 2.0 21.191 1 22 786 807 UCUUGCCUACACCGCCCAUGCC GGUAUGGGGGGUGUAGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *-* A0A068EX84_SOLHA) 1 sly-miR482b Solyc04g025820.1.1 2.0 19.14 1 22 314 335 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGAUUAGGCAAGA Translation Disease resistance protein (AHRD V3.3 *-* D1GEE0_BRARP) 1 sly-miR482b Solyc07g039420.1.1 2.0 23.494 1 22 568 589 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGAUUAGGCAAGA Translation Disease resistance protein (NBS-LRR class) family (AHRD V3.3 --* AT5G38350.1) 1 sly-miR482b Solyc04g025840.2.1 2.0 19.226 1 22 493 514 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGAUUAGGCAAGA Translation Disease resistance family protein (AHRD V3.3 *-* B9GY55_POPTR) 1 sly-miR482c Solyc07g049700.1.1 2.0 24.47 1 22 544 565 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGUGGUAUUGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR482d-3p Solyc02g032650.3.1 2.0 15.284 1 22 796 817 UUUCCUAUUCCACCCAUGCCAA GUGGUAUGGGUGGUAUAGGGAA Translation Disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** A0A072U6S8_MEDTR) 1 sly-miR5302a Solyc05g023745.1.1 2.0 13.649 1 21 380 401 AAACGAGGUU-UGUUACUUUGG ACAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain (AHRD V3.3 *-* A0A061FID3_THECC) 1 sly-miR5302b-3p Solyc11g022600.2.1 2.0 13.975 1 22 960 982 UUUUCAACUAUAGCAUU-AUUUU AAAAUCAAUGCUGUAGUUGAGAA Cleavage Mitochondrial transcription termination factor-like (AHRD V3.3 *-* Q6Z8L0_ORYSJ) 1 sly-miR5302b-3p Solyc06g071480.3.1 2.0 13.141 1 22 1435 1456 UUUUCAACUAUAGCAUUAUUUU UAAAUAAUGCUAGGGUUGAGAA Translation Dof zinc finger protein (AHRD V3.3 *** A0A0B6VJP1_TOBAC) 1 sly-miR5302b-5p Solyc04g077050.3.1 2.0 11.731 1 22 44 65 UGAAAUGCUAUAGUUGGAAAGU AAUUUCCUACUAUAGUAUUUUA Cleavage Amino acid transporter (AHRD V3.3 *** P93561_SOLTU) 1 sly-miR5303 Solyc10g006360.2.1 2.0 14.441 1 21 1237 1257 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGACUCUCCAAAAA Cleavage Hexon (AHRD V3.3 *** A0A0B0PIL4_GOSAR) 1 sly-miR5303 Solyc12g010440.2.1 2.0 8.077 1 21 2351 2371 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGAAUUCUCCAAAAA Cleavage Glycerol-3-phosphate transporter family protein (AHRD V3.3 *** B9IML0_POPTR) 1 sly-miR5303 Solyc04g080330.3.1 2.0 13.771 1 21 4474 4494 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGACUCUUCAAACA Cleavage Peroxidase (AHRD V3.3 *** K4BVB2_SOLLC) 1 sly-miR5303 Solyc06g083875.1.1 2.0 10.79 1 21 4610 4630 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGACUCUCCAAAAA Cleavage pollen Ole e I family allergen protein (AHRD V3.3 *** AT2G20515.1) 1 sly-miR5303 Solyc07g052300.3.1 2.0 20.845 1 21 1734 1754 UUUUUGAAGAGUUCGAGCAAC UUUGCUCGAAUUUUUUAGAAA Cleavage R2R3MYB transcription factor 101 1 sly-miR5303 Solyc03g005190.3.1 2.0 10.66 1 21 24 45 UUUUUGAAGAGUUCGA-GCAAC UUUGCAUUGAAUUCUUCAAAAA Cleavage Phosphoinositide phosphatase family protein (AHRD V3.3 --* AT3G43220.3) 1 sly-miR5303 Solyc11g072380.2.1 2.0 11.216 1 21 2182 2202 UUUUUGAAGAGUUCGAGCAAC CUGGCUCGAAUUUUUCAAAAA Cleavage Vicilin-like antimicrobial peptides 2-2 (AHRD V3.3 *** W9SCA8_9ROSA) 1 sly-miR5304 Solyc07g039557.1.1 2.0 9.153 1 21 2 22 UCAAUGCUACAUACUCAUCCC UGGAUGAGUAUAUGGUAUUGA Translation LOW QUALITY:Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151R0M8_CAJCA) 1 sly-miR6022 Solyc12g100020.1.1 2.0 17.963 1 21 973 993 UGGAAGGGAGAAUAUCCAGGA UCAUGGAUAUUCUCCCUUCCU Cleavage LOW QUALITY:Leucine-rich receptor-like kinase family protein, putative (AHRD V3.3 *** G7KYV8_MEDTR) 1 sly-miR6023 Solyc11g065095.1.1 2.0 20.374 1 22 61 82 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUCUUGGAA Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 --* A0A151U6I4_CAJCA) 1 sly-miR6023 Solyc01g009700.2.1 2.0 19.723 1 22 71 92 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUCUUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1) 1 sly-miR6023 Solyc01g009680.3.1 2.0 20.474 1 22 1340 1361 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUCCUGGAA Cleavage Lipoxygenase (AHRD V3.3 *** K4ATG3_SOLLC) 1 sly-miR6023 Solyc01g008720.2.1 2.0 14.031 1 22 649 670 UUCCAUGAAAGAGUUUUUGGAU AUCCAACAAUUCUUUCAUGGGA Cleavage Mannan endo-1 4-beta-mannosidase (AHRD V1 ***- A8FDC6_BACP2)%3B contains Interpro domain(s) IPR001547 Glycoside hydrolase%2C family 5 1 sly-miR6023 Solyc01g008710.4.1 2.0 8.475 1 22 631 652 UUCCAUGAAAGAGUUUUUGGAU AUCCAACAAUUCUUUCAUGGGA Cleavage inactive endo-beta-mannanase 1 sly-miR6024 Solyc12g005970.1.1 2.0 18.518 1 22 508 529 UUUUAGCAAGAGUUGUUUUACC GGUAAAACAACUCUUGCGAAGA Cleavage LOW QUALITY:Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *-* AT5G35450.2) 1 sly-miR6024 Solyc02g070410.2.1 2.0 21.74 1 22 841 862 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCCAAAA Cleavage Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR6024 Solyc11g006520.2.1 2.0 21.292 1 22 834 855 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCCAAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6024 Solyc11g070020.2.1 2.0 23.705 1 22 2005 2026 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACACUUGCUAAAG Translation Disease resistance protein (AHRD V3.3 *-* A0A068EUA5_SOLLC) 1 sly-miR6024 Solyc10g008230.2.1 2.0 18.537 1 22 565 586 UUUUAGCAAGAGUUGUUUUACC GGCAAAACGACUCUUGCUAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6024 Solyc10g008240.3.1 2.0 17.623 1 22 511 532 UUUUAGCAAGAGUUGUUUUACC GGCAAAACGACUCUUGCUAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6024 Solyc11g069990.2.1 2.0 23.705 1 22 1233 1254 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACACUUGCUAAAG Translation I2C5 1 sly-miR6026 Solyc01g006200.3.1 2.0 22.343 1 22 558 579 UUCUUGGCUAGAGUUGUAUUGC GUAAUACAACUAUAGCCAAGAC Translation Reticulon-like protein B14 (AHRD V3.3 --* RTNLN_ARATH) 1 sly-miR6026 Solyc10g047640.2.1 2.0 20.047 1 22 829 851 UUCUUGGCUAGAG-UUGUAUUGC GGAAUGCAGGCUCUAGCCAAGAA Cleavage GATA transcription factor, putative (AHRD V3.3 *** B9S9L8_RICCO) 1 sly-miR6026 Solyc07g062450.3.1 2.0 13.267 1 22 751 773 UUCUUGGC-UAGAGUUGUAUUGC CUAAUACAACUCCACGCCAAGAA Translation Rab3 GTPase-activating protein non-catalytic subunit (AHRD V3.3 *** AT3G14910.1) 1 sly-miR6026 Solyc09g092290.1.1 2.0 22.298 1 22 575 596 UUCUUGGCUAGAGUUGUAUUGC GAAAAACAACUCUUGCCAAGAA Translation Ph-3 resistance protein (AHRD V3.3 *** A0A060D304_SOLPI) 1 sly-miR6026 Solyc09g018220.2.1 2.0 19.244 1 22 570 591 UUCUUGGCUAGAGUUGUAUUGC GGAAAACAACUCUUGCCAAGAA Translation Tobacco mosaic virus resistance-2 1 sly-miR6027-3p Solyc11g069020.2.1 2.0 10.356 1 22 1252 1273 UGAAUCCUUCGGCUAUCCAUAA UUAUGGAUUGCUGAAGGAUUUA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6027-3p Solyc09g098130.2.1 2.0 16.606 1 22 2563 2584 UGAAUCCUUCGGCUAUCCAUAA UUAUGGAUUGCUGAAGGAUUCG Cleavage CC-NBS-LRR gene 1 sly-miR6027-3p Solyc05g009630.3.1 2.0 19.91 1 22 1431 1452 UGAAUCCUUCGGCUAUCCAUAA UUAUGGAUCGCGGAAGGAUUCA Translation Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR6027-3p Solyc01g108900.3.1 2.0 17.735 1 22 3467 3489 UGAAUCCUUCGGCUA-UCCAUAA AAAUGGAAUGGCCGGAGGAUUCA Cleavage pollen leucine rich repeat domain-extensin 1 sly-miR9470-3p Solyc06g033850.3.1 2.0 18.428 1 20 919 938 UUUGGCUCAUGGAUUUUAGC GCUGAAAUCCAUGAGCCUAA Cleavage Dehydration responsive element-binding factor protein (AHRD V3.3 --* A0A0K0K9Y3_ELECO) 1 sly-miR9470-3p Solyc06g072310.3.1 2.0 12.234 1 20 3233 3252 UUUGGCUCAUGGAUUUUAGC GCUAAAAUAAAUGAGCCAAA Translation Homeobox-leucine zipper family protein (AHRD V3.3 *** B9N3B2_POPTR) 1 sly-miR9470-5p Solyc10g051270.2.1 2.0 15.228 1 21 902 922 UGAAAUCCAUGAGCCUAAACU GGGUUAUGCUCAUGGAUUUCA Cleavage RING/U-box superfamily protein (AHRD V3.3 *** AT2G23780.3) 1 sly-miR9474-5p Solyc10g080070.2.1 2.0 11.971 1 22 1752 1773 UGUAGAAGUCAUGAAUAAAAUG CAUUUGAUUUAUGACUUCUACG Cleavage Mitochondrial GTPase 1 (AHRD V3.3 *** A0A0B0PKU7_GOSAR) 1 sly-miR9474-5p Solyc12g010470.2.1 2.0 15.235 1 22 1634 1656 UGUAGAAGUCA-UGAAUAAAAUG UGUUUUAUUCAAUGAUUUCUAUA Translation PLATZ transcription factor family protein (AHRD V3.3 *** A0A061GPE1_THECC) 1 sly-miR9476-5p Solyc09g007120.3.1 2.0 13.592 1 21 120 140 UCUAGUCCUGCAUCUUUUUUU AAAACAAGAUGUAGGGCUAGA Cleavage TATA box-binding protein associated factor RNA polymerase I subunit B-like protein (AHRD V3.3 *** A0A072UJP8_MEDTR) 1 sly-miR9476-5p Solyc11g005640.2.1 2.0 13.874 1 21 1367 1387 UCUAGUCCUGCAUCUUUUUUU UAAAAAAGAAGUAGGACUAGG Cleavage Polyubiquitin (AHRD V3.3 *-* UBI2P_PETCR) 1 sly-miR9478-3p Solyc10g085690.2.1 2.0 16.877 1 21 3260 3280 UUCGAUGACAUAUUUGAGCCU AAGUUCAGAUAUGUCAUCGAA Cleavage PRC-barrel-like protein (AHRD V3.3 *** A0A103XQI6_CYNCS) 1 sly-miR9478-3p Solyc04g054190.3.1 2.0 16.391 1 21 3607 3627 UUCGAUGACAUAUUUGAGCCU GGGAUCAAAUAUGUCAUUGAG Cleavage ABC1 protein (AHRD V3.3 *** D2XP29_MAIZE) 1 sly-miR9479-5p Solyc11g070100.2.1 2.0 10.011 1 22 116 137 UCCAGUCCUCUACCCUUCUCCA UGGAGAAGGGUAGAGGGGUGGA Cleavage Protein EARLY FLOWERING 3 (AHRD V3.3 *** A0A0B2RBI0_GLYSO) 1 sly-miR9479-5p Solyc06g007380.1.1 2.0 12.794 1 22 1112 1133 UCCAGUCCUCUACCCUUCUCCA UAGAGAAGGGUCGAGGAUUGGG Translation LOW QUALITY:S-adenosyl-L-methionine-dependent methyltransferases superfamilyprotein (AHRD V3.3 *** A0A0K9NKQ9_ZOSMR) 1 sly-miR156a Solyc11g005660.2.1 2.5 10.329 1 21 295 315 UUGACAGAAGAUAGAGAGCAC CAGCUUUUUAUCUUCUGUUAA Cleavage Kinase family protein (AHRD V3.3 *** U5FF83_POPTR) 1 sly-miR156a Solyc01g106780.3.1 2.5 19.167 1 21 1169 1189 UUGACAGAAGAUAGAGAGCAC UGGCUCUUCAUCUUCUGUCAA Cleavage Pyruvate kinase (AHRD V3.3 *** K4B2P5_SOLLC) 1 sly-miR156b Solyc11g005660.2.1 2.5 10.329 1 21 295 315 UUGACAGAAGAUAGAGAGCAC CAGCUUUUUAUCUUCUGUUAA Cleavage Kinase family protein (AHRD V3.3 *** U5FF83_POPTR) 1 sly-miR156b Solyc01g106780.3.1 2.5 19.167 1 21 1169 1189 UUGACAGAAGAUAGAGAGCAC UGGCUCUUCAUCUUCUGUCAA Cleavage Pyruvate kinase (AHRD V3.3 *** K4B2P5_SOLLC) 1 sly-miR156c Solyc11g005660.2.1 2.5 10.329 1 21 295 315 UUGACAGAAGAUAGAGAGCAC CAGCUUUUUAUCUUCUGUUAA Cleavage Kinase family protein (AHRD V3.3 *** U5FF83_POPTR) 1 sly-miR156c Solyc01g106780.3.1 2.5 19.167 1 21 1169 1189 UUGACAGAAGAUAGAGAGCAC UGGCUCUUCAUCUUCUGUCAA Cleavage Pyruvate kinase (AHRD V3.3 *** K4B2P5_SOLLC) 1 sly-miR156d-3p Solyc05g054365.1.1 2.5 17.384 1 22 646 667 GCUCACUGCUCUAUCUGUCACC AGAGACAGGUAGAGCGGUGGGC Cleavage acyl-CoA dehydrogenase-like protein (AHRD V3.3 *** AT3G06810.1) 1 sly-miR156e-5p Solyc09g097880.3.1 2.5 18.043 1 20 909 929 UGAUAGAAGAGAGU-GAGCAC GUGCUCGAUUCUCUUCUGUUA Cleavage DNA topoisomerase (AHRD V3.3 *** K4CWW0_SOLLC) 1 sly-miR156e-5p Solyc07g053810.3.1 2.5 7.07 1 20 729 748 UGAUAGAAGAGAGUGAGCAC UUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 4 1 sly-miR156e-5p Solyc03g114850.3.1 2.5 13.34 1 20 1732 1751 UGAUAGAAGAGAGUGAGCAC AUGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 6a 1 sly-miR159 Solyc03g119530.3.1 2.5 19.674 1 21 2505 2526 UUUGGAUUGAAGGGAGCU-CUA UAGGAGCUCCCUUCAGUCCAAU Cleavage LOB domain protein 40 (AHRD V3.3 *** K7VSW9_SOLTU) 1 sly-miR159 Solyc06g073640.3.1 2.5 16.596 1 21 1758 1778 UUUGGAUUGAAGGGAGCUCUA UCGAGCUCCCUUCACUCCAAA Cleavage GAMYB-like2 1 sly-miR159 Solyc06g068920.3.1 2.5 17.459 1 21 98 119 UUUGGAUUGAAGGGAG-CUCUA CAGAGUCUUUCUUCAGUCCAAA Cleavage Kinase, putative (AHRD V3.3 *** B9T5A7_RICCO) 1 sly-miR159 Solyc02g078670.3.1 2.5 24.277 1 21 542 562 UUUGGAUUGAAGGGAGCUCUA GAGAGUUCCAUUCAAUCCAAU Cleavage COP1-interacting protein, putative (AHRD V3.3 *** A0A072VAF6_MEDTR) 1 sly-miR159 Solyc02g079010.3.1 2.5 20.949 1 21 819 839 UUUGGAUUGAAGGGAGCUCUA CGGAGCUUCAUUCAGUCCAAA Cleavage Cotton fiber expressed protein (AHRD V3.3 *** A0A109Y892_GOSBA) 1 sly-miR159 Solyc01g068260.3.1 2.5 12.831 1 21 1750 1770 UUUGGAUUGAAGGGAGCUCUA AAGAGUAGCCUUCAAUCCAAA Cleavage BRCT domain-containing family protein (AHRD V3.3 *-* U5GIX9_POPTR) 1 sly-miR159 Solyc07g052640.3.1 2.5 1.656 1 21 403 423 UUUGGAUUGAAGGGAGCUCUA CAAAACUUCCUUCAAUCCAAA Cleavage Transferring glycosyl group transferase (AHRD V3.3 *** A0A072UKL4_MEDTR) 1 sly-miR162 Solyc04g016510.3.1 2.5 20.06 1 21 910 930 UCGAUAAACCUCUGCAUCCAG GUGGAUGCAGAGGUUGAUUGG Cleavage Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** A0A0K9PSA6_ZOSMR) 1 sly-miR164a-3p Solyc01g081140.1.1 2.5 13.614 1 21 1605 1625 CAUGUGCCUGUUUUCCCCAUC AAAGGGGAAAACAAGCAUAUG Cleavage Phototropic-responsive NPH3 family protein, putative (AHRD V3.3 *** A0A061EZT3_THECC) 1 sly-miR164a-5p Solyc11g066150.2.1 2.5 14.078 1 21 433 453 UGGAGAAGCAGGGCACGUGCA CUCGCAUGCCCUGCUUCUCCA Cleavage UDP-glucuronate decarboxylase 1 (AHRD V3.3 *** Q6IVK5_TOBAC) 1 sly-miR164b-5p Solyc11g066150.2.1 2.5 14.078 1 21 433 453 UGGAGAAGCAGGGCACGUGCA CUCGCAUGCCCUGCUUCUCCA Cleavage UDP-glucuronate decarboxylase 1 (AHRD V3.3 *** Q6IVK5_TOBAC) 1 sly-miR166a Solyc05g008930.3.1 2.5 16.119 1 21 5422 5442 UCGGACCAGGCUUCAUUCCCC AGAGAAGGAAGCCUGGUUCGA Cleavage Protein kinase family protein (AHRD V3.3 *-* AT5G38210.2) 1 sly-miR166b Solyc05g008930.3.1 2.5 16.119 1 21 5422 5442 UCGGACCAGGCUUCAUUCCCC AGAGAAGGAAGCCUGGUUCGA Cleavage Protein kinase family protein (AHRD V3.3 *-* AT5G38210.2) 1 sly-miR166c-3p Solyc07g045425.1.1 2.5 18.926 1 21 476 496 UCGGACCAGGCUUCAUUCCUC AAGGUAUCAAGCCUGGUUCGA Cleavage Pentatricopeptide repeat-containing family protein (AHRD V3.3 *-* B9IFK4_POPTR) 1 sly-miR167b-5p Solyc05g052590.1.1 2.5 18.319 1 22 1464 1486 UAAAGCUGCCAGCA-UGAUCUGG AAAGAUUGGUGCUGGCAGCUUUG Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN) 1 sly-miR167b-5p Solyc03g031970.3.1 2.5 22.08 1 22 2972 2994 UA-AAGCUGCCAGCAUGAUCUGG AAAGAUCAGGCUGGCAGCUUGUA Cleavage Auxin response factor (AHRD V3.3 *** A0A191T8S7_SALMI) 1 sly-miR167b-5p Solyc02g037530.3.1 2.5 24.266 1 22 2722 2744 UA-AAGCUGCCAGCAUGAUCUGG AAAGAUCAGGCUGGCAGCUUGUA Cleavage auxin response factor 8B 1 sly-miR167b-5p Solyc03g007790.3.1 2.5 21.107 1 22 1163 1184 UAAAGCUGCCAGCAUGAUCUGG UUAGAUCAAGCUGGAAGCUUUG Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** K4BEK1_SOLLC) 1 sly-miR167b-5p Solyc04g077220.3.1 2.5 18.991 1 22 336 357 UAAAGCUGCCAGCAUGAUCUGG AGAGAUCAUGCUAGUAGUUUUG Translation Homeobox-leucine zipper protein family (AHRD V3.3 *** AT4G37790.1) 1 sly-miR167b-5p Solyc04g073990.3.1 2.5 17.218 1 22 1100 1121 UAAAGCUGCCAGCAUGAUCUGG UGAGAAUAUGCUGGUGGCUUUA Cleavage annexin p34 1 sly-miR168a-5p Solyc03g098280.3.1 2.5 19.442 1 21 770 790 UCGCUUGGUGCAGGUCGGGAC UUCCCGAGCUGCACCAAGCAA Cleavage Argonaute 1b 1 sly-miR168a-5p Solyc06g072300.3.1 2.5 23.686 1 21 528 548 UCGCUUGGUGCAGGUCGGGAC UUCCCGAGCUGCACCAAGCAA Cleavage Argonaute 1 1 sly-miR168b-5p Solyc03g098280.3.1 2.5 19.442 1 21 770 790 UCGCUUGGUGCAGGUCGGGAC UUCCCGAGCUGCACCAAGCAA Cleavage Argonaute 1b 1 sly-miR168b-5p Solyc06g072300.3.1 2.5 23.686 1 21 528 548 UCGCUUGGUGCAGGUCGGGAC UUCCCGAGCUGCACCAAGCAA Cleavage Argonaute 1 1 sly-miR169a Solyc08g062210.3.1 2.5 19.433 1 21 1637 1657 CAGCCAAGGAUGACUUGCCGG UCGGCAGUUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169a Solyc01g008490.3.1 2.5 23.6 1 21 610 630 CAGCCAAGGAUGACUUGCCGG GUGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169a Solyc03g121950.3.1 2.5 17.526 1 21 2908 2928 CAGCCAAGGAUGACUUGCCGG GUGGGAAGUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169b Solyc01g087240.3.1 2.5 21.55 1 21 2573 2593 UAGCCAAGGAUGACUUGCCUG CAGGCAAUUCAUUCUUGGCUU Cleavage nuclear transcription factor Y subunit A-9 1 sly-miR169b Solyc08g062210.3.1 2.5 19.433 1 21 1637 1657 UAGCCAAGGAUGACUUGCCUG UCGGCAGUUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169c Solyc08g062210.3.1 2.5 19.433 1 21 1637 1657 CAGCCAAGGAUGACUUGCCGA UCGGCAGUUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169c Solyc01g008490.3.1 2.5 23.6 1 21 610 630 CAGCCAAGGAUGACUUGCCGA GUGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169c Solyc03g121950.3.1 2.5 17.526 1 21 2908 2928 CAGCCAAGGAUGACUUGCCGA GUGGGAAGUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169d Solyc08g062210.3.1 2.5 19.433 1 21 1637 1657 UAGCCAAGGAUGACUUGCCUA UCGGCAGUUCAUCCUUGGCUA Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169d Solyc01g087240.3.1 2.5 21.55 1 21 2573 2593 UAGCCAAGGAUGACUUGCCUA CAGGCAAUUCAUUCUUGGCUU Cleavage nuclear transcription factor Y subunit A-9 1 sly-miR169e-3p Solyc06g082560.2.1 2.5 10.104 1 21 2456 2476 UGGCAAGCAUCUUUGGCGACU AGUUAUCAAAGAUGCUUGUCA Cleavage Chaperone protein (AHRD V3.3 *** W9RSC3_9ROSA) 1 sly-miR169e-3p Solyc00g016470.1.1 2.5 15.547 1 21 59 79 UGGCAAGCAUCUUUGGCGACU UGUUGUCAAAGAUGCUUGCUU Cleavage LOW QUALITY:Transmembrane protein, putative (AHRD V3.3 *-* G7IIE5_MEDTR) 1 sly-miR169e-5p Solyc01g087240.3.1 2.5 21.55 1 22 2572 2593 UAGCCAAGGAUGACUUGCCUUU UCAGGCAAUUCAUUCUUGGCUU Cleavage nuclear transcription factor Y subunit A-9 1 sly-miR171a Solyc08g081890.3.1 2.5 17.093 1 21 3719 3739 UGAUUGAGCCGUGCCAAUAUC GAUAUUGGCAUGGCUCUAUCG Cleavage ABC transporter family protein (AHRD V3.3 *** U5FPJ5_POPTR) 1 sly-miR171b Solyc02g085600.1.1 2.5 19.003 1 21 582 602 UUGAGCCGUGCCAAUAUCACG UGUGAUACUGGCACGCCUCAA Cleavage Transcription factor GRAS (AHRD V3.3 *** A0A103YGV0_CYNCS) 1 sly-miR171b Solyc11g066010.2.1 2.5 19.989 1 21 198 219 UUGAGCCGUG-CCAAUAUCACG GGUAAUAUUGGUCAUGGCUCAA Translation ATP synthase subunit epsilon (AHRD V3.3 *** W9SG58_9ROSA) 1 sly-miR171b Solyc03g025700.1.1 2.5 13.757 1 21 745 765 UUGAGCCGUGCCAAUAUCACG GGUGAUAUUGUUAAGGCUCAA Translation Pentatricopeptide repeat-containing protein (AHRD V3.3 *** V5QPJ4_GOSHI) 1 sly-miR171c Solyc03g121740.2.1 2.5 15.696 1 21 245 265 UAUUGGUGCGGUUCAAUGAGA UUUCAUUGAAUUGCACUAAUG Cleavage R2R3MYB transcription factor 26 1 sly-miR171e Solyc08g078800.2.1 2.5 16.529 1 21 1349 1369 UUGAGCCGCGUCAAUAUCUCU AAUGAUAUUGGCGCGGCUCAA Cleavage GRAS family transcription factor (AHRD V3.3 *** A0A061GBD8_THECC) 1 sly-miR171e Solyc07g047680.2.1 2.5 21.466 1 21 76 96 UUGAGCCGCGUCAAUAUCUCU UGAGAUAUUGAAGAGGCUCGA Translation F-box family protein (AHRD V3.3 *** AT5G48170.1) 1 sly-miR172a Solyc01g090460.3.1 2.5 17.795 1 21 385 405 AGAAUCUUGAUGAUGCUGCAU AUGCAUCAUCAUCAAGUUUCU Cleavage HD-ZIP 1 sly-miR172a Solyc07g063770.3.1 2.5 18.332 1 21 2065 2085 AGAAUCUUGAUGAUGCUGCAU AUGUAUCUUCAUCAAGAUUCU Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** A0A0V0IT75_SOLCH) 1 sly-miR172a Solyc10g006710.3.1 2.5 17.771 1 21 1980 2000 AGAAUCUUGAUGAUGCUGCAU AUGUACCUUCAUCAAGAUUCU Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** U5GTQ6_POPTR) 1 sly-miR172b Solyc01g090460.3.1 2.5 17.795 1 21 385 405 AGAAUCUUGAUGAUGCUGCAU AUGCAUCAUCAUCAAGUUUCU Cleavage HD-ZIP 1 sly-miR172b Solyc07g063770.3.1 2.5 18.332 1 21 2065 2085 AGAAUCUUGAUGAUGCUGCAU AUGUAUCUUCAUCAAGAUUCU Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** A0A0V0IT75_SOLCH) 1 sly-miR172b Solyc10g006710.3.1 2.5 17.771 1 21 1980 2000 AGAAUCUUGAUGAUGCUGCAU AUGUACCUUCAUCAAGAUUCU Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** U5GTQ6_POPTR) 1 sly-miR1916 Solyc07g055750.3.1 2.5 13.697 1 20 1003 1022 AUUUCACUUAGACACCUCAA UUGAGGUCUAUAAGUGAAGU Translation Strictosidine synthase-like protein (AHRD V3.3 *** A7WPL3_TOBAC) 1 sly-miR1917 Solyc04g005680.3.1 2.5 14.268 1 21 472 493 AUUAAUAAAGAGU-GCUAAAGU UUUUUAGGGACUCUUUAUUAAU Cleavage Ribosomal protein (AHRD V3.3 *** B3TM27_ELAGV) 1 sly-miR1918 Solyc10g054100.2.1 2.5 15.34 1 22 329 350 UGUUGGUGAGAGUUCGAUUCUC CGGAAUCGAACUCUUGUCAAUG Cleavage Protein DETOXIFICATION (AHRD V3.3 *** M0ZV31_SOLTU) 1 sly-miR1918 Solyc11g012700.2.1 2.5 14.608 1 22 430 451 UGUUGGUGAGAGUUCGAUUCUC AACAGUGGAACUCUCACCAACA Cleavage oligopeptide transporter (AHRD V3.3 *** AT4G16370.1) 1 sly-miR319a Solyc01g009070.3.1 2.5 21.371 1 20 1837 1856 CUUGGACUGAAGGGAGCUCC GGAGCUCCCUUCACUCCAAA Cleavage gamyb-like 1 1 sly-miR319a Solyc02g079010.3.1 2.5 20.949 1 20 820 839 CUUGGACUGAAGGGAGCUCC GGAGCUUCAUUCAGUCCAAA Cleavage Cotton fiber expressed protein (AHRD V3.3 *** A0A109Y892_GOSBA) 1 sly-miR319b Solyc02g079010.3.1 2.5 22.293 1 21 818 838 UUGGACUGAAGGGAGCUCCCU UCGGAGCUUCAUUCAGUCCAA Translation Cotton fiber expressed protein (AHRD V3.3 *** A0A109Y892_GOSBA) 1 sly-miR319c-3p Solyc08g048370.3.1 2.5 14.608 1 21 908 928 UUGGACUGAAGGGAGCUCCUU CAGGGGGACCCUUCAGUCCAA Cleavage TCP transcription factor 29 1 sly-miR319c-5p Solyc01g094060.3.1 2.5 16.605 1 21 1591 1611 AGAGCUUCCUUCAGCCCACUC AAGUUGGCUGAAGAAAGUUCU Cleavage BEACH domain-containing protein (AHRD V3.3 *** A0A124SBD7_CYNCS) 1 sly-miR390a-3p Solyc09g090660.3.1 2.5 14.037 1 21 1960 1980 CGCUAUCCAUCCUGAGUUUUA CAAAACUCUGAAUGGAUAGUG Translation Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *-* A0A0K9PSA6_ZOSMR) 1 sly-miR390a-5p Solyc01g091230.3.1 2.5 16.127 1 21 538 558 AAGCUCAGGAGGGAUAGCACC GGUGUUAUUCCUCCUGAGGUU Cleavage Receptor-like kinase (AHRD V3.3 *** A0A191UPW4_CASSA) 1 sly-miR390b-5p Solyc04g005390.2.1 2.5 21.739 1 21 796 816 AAGCUCAGGAGGGAUAGCGCC GGUGUGAUCCCUUCUGAGCUU Cleavage Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103YAE5_CYNCS) 1 sly-miR390b-5p Solyc04g079120.3.1 2.5 18.491 1 21 620 640 AAGCUCAGGAGGGAUAGCGCC AGUGCUAUUCCUCCUGAUCUU Cleavage Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G47380.1) 1 sly-miR395a Solyc04g054730.3.1 2.5 13.208 1 22 261 282 CUGAAGUGUUUGGGGGAACUCC UGUGUUCUCCCAAACACUUCAA Cleavage Sulfate transporter (AHRD V3.3 *** A7YGJ3_POPCN) 2 sly-miR395b Solyc04g054730.3.1 2.5 13.208 1 22 261 282 CUGAAGUGUUUGGGGGAACUCC UGUGUUCUCCCAAACACUUCAA Cleavage Sulfate transporter (AHRD V3.3 *** A7YGJ3_POPCN) 2 sly-miR396a-3p Solyc06g063080.1.1 2.5 18.494 1 21 197 217 GUUCAAUAAAGCUGUGGGAAG AUUCCUGCAGCUUUGUUGAAA Cleavage LOW QUALITY:RING/U-box superfamily protein (AHRD V3.3 *-* AT3G14250.1) 1 sly-miR396a-5p Solyc03g082430.1.1 2.5 24.453 1 21 456 477 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCAUGUGGAA Cleavage LOW QUALITY:Growth-regulating factor (AHRD V3.3 *** G7J891_MEDTR) 1 sly-miR396a-5p Solyc12g096070.2.1 2.5 20.954 1 21 630 651 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCAUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** A0A072TW62_MEDTR) 1 sly-miR396a-5p Solyc07g041640.3.1 2.5 12.148 1 21 1136 1157 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor-like protein (AHRD V3.3 *** A0A072US13_MEDTR) 1 sly-miR396a-5p Solyc08g005430.3.1 2.5 15.162 1 21 880 901 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** A0A072TW62_MEDTR) 1 sly-miR396a-5p Solyc08g083230.2.1 2.5 10.066 1 21 498 519 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *-* G7J891_MEDTR) 1 sly-miR396a-5p Solyc08g075950.2.1 2.5 19.232 1 21 619 640 UUCCACA-GCUUUCUUGAACUG CCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** A0A072TW62_MEDTR) 1 sly-miR396a-5p Solyc01g091540.2.1 2.5 20.361 1 21 767 788 UUCCACA-GCUUUCUUGAACUG ACGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** M4T4B6_ARAHY) 1 sly-miR396a-5p Solyc02g050283.1.1 2.5 19.197 1 21 196 216 UUCCACAGCUUUCUUGAACUG UGGUUCAAGAGGUCUGUGGAA Translation LOW QUALITY:DUF4283 domain protein (AHRD V3.3 --* A0A072VR89_MEDTR) 1 sly-miR396a-5p Solyc12g056995.1.1 2.5 18.49 1 21 1746 1766 UUCCACAGCUUUCUUGAACUG CAAUUCGAAAAAGCUGUGGAA Cleavage tetratricopeptide repeat (TPR)-containing protein (AHRD V3.3 *** AT5G65160.1) 1 sly-miR396a-5p Solyc12g088670.2.1 2.5 17.653 1 21 615 635 UUCCACAGCUUUCUUGAACUG AGGAUCAAGGAAGCUGUGGGA Cleavage cysteine protease CYP1 1 sly-miR396a-5p Solyc02g062740.3.1 2.5 21.665 1 21 1381 1401 UUCCACAGCUUUCUUGAACUG AGGAUCAGGAAAGCUGUGGAG Cleavage cytosine-5 DNA methyltransferase5 1 sly-miR396a-5p Solyc06g065030.3.1 2.5 12.753 1 21 322 342 UUCCACAGCUUUCUUGAACUG AAGUUUAAGAGAGAUGUGGAG Cleavage Transmembrane 9 superfamily member (AHRD V3.3 *-* K4C7D2_SOLLC) 1 sly-miR396a-5p Solyc02g062750.3.1 2.5 14.655 1 21 862 882 UUCCACAGCUUUCUUGAACUG GAGAUCAAGAAAUCUGUGGGA Translation sugar facilitator protein 9 1 sly-miR396b Solyc01g091540.2.1 2.5 20.361 1 21 767 788 UUCCACA-GCUUUCUUGAACUU ACGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** M4T4B6_ARAHY) 1 sly-miR396b Solyc03g082430.1.1 2.5 24.453 1 21 456 477 UUCCACA-GCUUUCUUGAACUU CCGUUCAAGAAAGCAUGUGGAA Cleavage LOW QUALITY:Growth-regulating factor (AHRD V3.3 *** G7J891_MEDTR) 1 sly-miR396b Solyc08g083230.2.1 2.5 10.066 1 21 498 519 UUCCACA-GCUUUCUUGAACUU CCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *-* G7J891_MEDTR) 1 sly-miR396b Solyc04g077510.3.1 2.5 19.99 1 21 1062 1083 UUCCACA-GCUUUCUUGAACUU UCGUUCAAGAAAGCCUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** A0A072VEY4_MEDTR) 1 sly-miR396b Solyc02g092070.3.1 2.5 14.74 1 21 960 981 UUCCACA-GCUUUCUUGAACUU UCGUUCAAGAAAGCAUGUGGAA Cleavage Growth-regulating factor (AHRD V3.3 *** A0A072VEY4_MEDTR) 1 sly-miR396b Solyc12g088670.2.1 2.5 17.653 1 21 615 635 UUCCACAGCUUUCUUGAACUU AGGAUCAAGGAAGCUGUGGGA Cleavage cysteine protease CYP1 1 sly-miR396b Solyc02g062740.3.1 2.5 21.665 1 21 1381 1401 UUCCACAGCUUUCUUGAACUU AGGAUCAGGAAAGCUGUGGAG Cleavage cytosine-5 DNA methyltransferase5 1 sly-miR396b Solyc06g065030.3.1 2.5 12.753 1 21 322 342 UUCCACAGCUUUCUUGAACUU AAGUUUAAGAGAGAUGUGGAG Cleavage Transmembrane 9 superfamily member (AHRD V3.3 *-* K4C7D2_SOLLC) 1 sly-miR396b Solyc02g050283.1.1 2.5 19.197 1 21 196 216 UUCCACAGCUUUCUUGAACUU UGGUUCAAGAGGUCUGUGGAA Translation LOW QUALITY:DUF4283 domain protein (AHRD V3.3 --* A0A072VR89_MEDTR) 1 sly-miR396b Solyc02g062750.3.1 2.5 14.655 1 21 862 882 UUCCACAGCUUUCUUGAACUU GAGAUCAAGAAAUCUGUGGGA Translation sugar facilitator protein 9 1 sly-miR397 Solyc05g012257.1.1 2.5 12.602 1 20 511 531 AUUGAGUGCAGCGUUG-AUGA UCAUUCAAUGCUGCACUCAAG Cleavage Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RV44_RICCO) 1 sly-miR397 Solyc02g085120.3.1 2.5 17.239 1 20 722 741 AUUGAGUGCAGCGUUGAUGA UUAUCAAUGCUGCUCUCAAU Cleavage Laccase (AHRD V3.3 *** I1LHT8_SOYBN) 2 sly-miR397 Solyc02g078690.2.1 2.5 20.179 1 20 1593 1612 AUUGAGUGCAGCGUUGAUGA UCAUCAAUGCUGGACUCAAG Cleavage Carboxypeptidase (AHRD V3.3 *** K4B993_SOLLC) 1 sly-miR397 Solyc06g074350.3.1 2.5 9.566 1 20 815 834 AUUGAGUGCAGCGUUGAUGA UCAUCAAUGUUUCACUUAAU Translation self-pruning 1 sly-miR397 Solyc09g010990.3.1 2.5 12.524 1 20 690 709 AUUGAGUGCAGCGUUGAUGA UAAUCAACGCUGCACUAAAU Cleavage Laccase (AHRD V3.3 *** M1AHK0_SOLTU) 1 sly-miR403-5p Solyc06g024203.1.1 2.5 20.342 1 21 2469 2490 CGUUUGUGCGUG-AAUCUAACA CCUUGGAUUGCACGCACAAACG Cleavage Peroxidase superfamily protein (AHRD V3.3 --* AT4G26010.2) 1 sly-miR477-3p Solyc02g086700.3.1 2.5 17.99 1 22 1041 1063 AGUUCUUGU-AGGGUGAGACAAC ACUGUUUUACCCUGACAGGAACU Translation Beta-1,3-glucanase (AHRD V3.3 *** Q9SYX6_TOBAC) 1 sly-miR477-3p Solyc09g083400.3.1 2.5 23.494 1 22 1864 1885 AGUUCUUGUAGGGUGAGACAAC UCUGUCUGGCCCUAAAAGAACU Cleavage TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT3G23090.4) 1 sly-miR482a Solyc06g062440.3.1 2.5 22.729 1 22 593 614 UUUCCAAUUCCACCCAUUCCUA UAGGAAUGGGGGGAAUAGGAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR482a Solyc10g007065.1.1 2.5 17.785 1 22 580 602 UUUCCAA-UUCCACCCAUUCCUA AAGAAAUGGGUGGAAGUUGGAAA Cleavage Phenylalanyl-tRNA synthetase alpha chain, putative (AHRD V3.3 *-* G7JG63_MEDTR) 1 sly-miR482a Solyc04g024950.1.1 2.5 15.862 1 22 4 26 UUUCCAAUUCCACCCAU-UCCUA GAGGAUAUGGGUGGCAUUGGAGA Translation LOW QUALITY:MATH domain/coiled-coil protein (AHRD V3.3 --* AT2G42475.1) 1 sly-miR482a Solyc04g053070.1.1 2.5 17.989 1 22 278 300 UUUCCAAUUCCACCCAU-UCCUA GAGGAUAUGGGUGGCAUUGGAGA Translation LOW QUALITY:DNA topoisomerase (AHRD V3.3 --* M5X3H0_PRUPE) 1 sly-miR482a Solyc04g049780.2.1 2.5 13.961 1 22 70 92 UUUCCAAUUCCACCCAU-UCCUA GAGGAUAUGGGUGGCAUUGGAGA Translation Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TCY2_CAJCA) 1 sly-miR482a Solyc01g020371.1.1 2.5 20.058 1 22 349 371 UUUCCAAUUCCACCCAU-UCCUA GGGGAUAUGGGUGGCAUUGGAGA Translation LOW QUALITY:GRF zinc finger family protein (AHRD V3.3 --* Q2QWQ9_ORYSJ) 1 sly-miR482a Solyc06g009533.1.1 2.5 18.082 1 22 77 98 UUUCCAAUUCCACCCAUUCCUA UUGGAGUUGGUGGAUUUGGAAA Cleavage Kinase family protein (AHRD V3.3 *-* B9I5G8_POPTR) 1 sly-miR482a Solyc03g116360.2.1 2.5 15.966 1 22 2405 2426 UUUCCAAUUCCACCCAUUCCUA GUGGGAUGUGUGGACUUGGAAA Cleavage Regulator of chromosome condensation (RCC1) family protein (AHRD V3.3 *** G7K368_MEDTR) 1 sly-miR482b Solyc01g067165.1.1 2.5 20.018 1 22 529 550 UCUUGCCUACACCGCCCAUGCC GGUAUGGGUGGUGUUGGUAAGA Cleavage Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072VNI6_MEDTR) 1 sly-miR482b Solyc10g054990.2.1 2.5 16.38 1 22 520 541 UCUUGCCUACACCGCCCAUGCC GGUAUGGGUGGUGUUGGUAAGA Cleavage Disease resistance protein (NBS-LRR class) family (AHRD V3.3 --* AT5G38350.1) 1 sly-miR482b Solyc10g055170.1.1 2.5 21.742 1 22 46 67 UCUUGCCUACACCGCCCAUGCC GGUAUGGGUGGUGUUGGUAAGA Cleavage LOW QUALITY:Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *-* A0A072VSK9_MEDTR) 1 sly-miR482b Solyc11g006530.2.1 2.5 18.804 1 22 526 547 UCUUGCCUACACCGCCCAUGCC GGAAUGGGCGGUAUAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR482b Solyc11g006630.1.1 2.5 21.57 1 22 532 553 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGUAUUGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR482b Solyc04g009130.3.1 2.5 20.794 1 22 586 607 UCUUGCCUACACCGCCCAUGCC GGCAUGGGUGGAUUAGGCAAGA Translation Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 1 sly-miR482b Solyc04g009290.2.1 2.5 23.41 1 22 574 595 UCUUGCCUACACCGCCCAUGCC GGCAUGGGUGGAUUAGGCAAGA Translation Disease resistance protein (AHRD V3.3 *-* D1GEE0_BRARP) 1 sly-miR482b Solyc07g039400.2.1 2.5 22.497 1 22 493 514 UCUUGCCUACACCGCCCAUGCC GGCAUGGGCGGAUUAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *-* D1GEE0_BRARP) 1 sly-miR482b Solyc10g054970.1.1 2.5 19.563 1 22 538 559 UCUUGCCUACACCGCCCAUGCC UGUAUGGGUGGUGUUGGUAAGA Cleavage CCNBS gene 1 sly-miR482c Solyc01g067165.1.1 2.5 20.018 1 22 529 550 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGUGGUGUUGGUAAGA Cleavage Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072VNI6_MEDTR) 1 sly-miR482c Solyc12g009450.2.1 2.5 19.509 1 22 729 750 UCUUGCCAAUACCGCCCAUUCC GGGAUGGGUGGCAUUGGUAAGA Translation Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** AT5G35450.2) 1 sly-miR482c Solyc10g054990.2.1 2.5 16.38 1 22 520 541 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGUGGUGUUGGUAAGA Cleavage Disease resistance protein (NBS-LRR class) family (AHRD V3.3 --* AT5G38350.1) 1 sly-miR482c Solyc10g055170.1.1 2.5 21.742 1 22 46 67 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGUGGUGUUGGUAAGA Cleavage LOW QUALITY:Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *-* A0A072VSK9_MEDTR) 1 sly-miR482c Solyc11g020100.2.1 2.5 23.736 1 22 1110 1131 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGCGGUAUCGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482c Solyc05g008070.3.1 2.5 21.303 1 22 532 553 UCUUGCCAAUACCGCCCAUUCC GGCAUGGGCGGUAUAGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR482c Solyc12g017800.2.1 2.5 24.453 1 22 1104 1125 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGCGGUAUAGGUAAGA Cleavage NBS-LRR class disease resistance protein (AHRD V3.3 *-* G8E3T3_SESIN) 1 sly-miR482c Solyc10g054970.1.1 2.5 19.563 1 22 538 559 UCUUGCCAAUACCGCCCAUUCC UGUAUGGGUGGUGUUGGUAAGA Cleavage CCNBS gene 1 sly-miR482c Solyc06g074760.2.1 2.5 15.026 1 22 1529 1551 UCUUGCCAA-UACCGCCCAUUCC GAAAUGGGCGGAAGUUGGCAGGA Translation Ring/U-Box superfamily protein (AHRD V3.3 *** AT2G27950.3) 1 sly-miR482d-3p Solyc05g009750.1.1 2.5 17.541 1 22 164 185 UUUCCUAUUCCACCCAUGCCAA UUGGAAUGGCUGGAAUAGGGAA Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC) 1 sly-miR482d-3p Solyc04g009290.2.1 2.5 18.898 1 22 572 593 UUUCCUAUUCCACCCAUGCCAA AUGGCAUGGGUGGAUUAGGCAA Cleavage Disease resistance protein (AHRD V3.3 *-* D1GEE0_BRARP) 1 sly-miR482d-3p Solyc01g105340.3.1 2.5 20.142 1 22 810 831 UUUCCUAUUCCACCCAUGCCAA GUGGCAUGGGUGGUAUGGGAGG Translation Chaperone protein DnaJ (AHRD V3.3 *** W9QNE7_9ROSA) 1 sly-miR482d-3p Solyc04g009130.3.1 2.5 20.332 1 22 584 605 UUUCCUAUUCCACCCAUGCCAA AUGGCAUGGGUGGAUUAGGCAA Cleavage Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 1 sly-miR482d-3p Solyc01g113620.2.1 2.5 16.895 1 22 806 827 UUUCCUAUUCCACCCAUGCCAA GUGGCAUUGGUGGAAUAGGCAA Cleavage Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *** AT5G36930.4) 1 sly-miR482d-3p Solyc04g026110.3.1 2.5 22.415 1 22 491 512 UUUCCUAUUCCACCCAUGCCAA AUGGCAUGGGCGGAUUGGGAAA Cleavage Disease resistance family protein (AHRD V3.3 *** B9GY55_POPTR) 1 sly-miR482d-3p Solyc04g009110.1.1 2.5 18.119 1 22 572 593 UUUCCUAUUCCACCCAUGCCAA AUGGCAUGGGCGGAUUAGGGAA Cleavage Nbs-lrr resistance protein (AHRD V3.3 *** A0A061FZT5_THECC) 1 sly-miR482d-5p Solyc04g079020.3.1 2.5 9.496 1 21 358 378 GGAGUGGGUGGGAUGGAAAAA GUUUUCCAUUUCAUUCAUUCC Cleavage 3-deoxy-manno-octulosonate cytidylyltransferase (AHRD V3.3 *** A0A0B2P540_GLYSO) 1 sly-miR482d-5p Solyc02g065420.3.1 2.5 3.796 1 21 299 320 GGAGUGGGUGGGAUG-GAAAAA CUUUUCGCAUUCCAUUCACUCC Cleavage CASP-like protein (AHRD V3.3 *** K4B6X5_SOLLC) 1 sly-miR482d-5p Solyc01g105710.3.1 2.5 10.367 1 21 315 335 GGAGUGGGUGGGAUGGAAAAA CUUUUCCAUUUCCCCCAUUCC Translation peptidyl-prolyl isomerase FKBP12 1 sly-miR482d-5p Solyc11g069400.2.1 2.5 11.479 1 21 213 233 GGAGUGGGUGGGAUGGAAAAA CUUCUCCGUCCUACUCACUCC Cleavage Protein disulfide-isomerase (AHRD V3.3 *** K4DA96_SOLLC) 1 sly-miR482e-3p Solyc02g021140.3.1 2.5 7.72 1 22 4 26 UCUUUCCU-ACUCCUCCCAUACC GGUAUGGGAGGAGUGAGUAAAGA Cleavage Superoxide dismutase (AHRD V3.3 *** K4B4W4_SOLLC) 1 sly-miR482e-5p Solyc08g075510.3.1 2.5 4.221 1 21 172 192 UGUGGGUGGGGUGGAAAGAUU CAUCUCUCUACCCCACCCACC Cleavage JmjC domain-containing protein (AHRD V3.3 *** A0A103XFS1_CYNCS),Pfam:PF13621 1 sly-miR5302b-3p Solyc04g051410.3.1 2.5 21.696 1 22 965 986 UUUUCAACUAUAGCAUUAUUUU AAAAUGAGGCUAUUGUUGAAAA Translation Ubiquitin carboxyl-terminal hydrolase (AHRD V3.3 *** G7LC68_MEDTR) 1 sly-miR5302b-3p Solyc11g005760.2.1 2.5 9.482 1 22 472 493 UUUUCAACUAUAGCAUUAUUUU AAAAUAAUGUGAUAAUUGAAAA Cleavage Hexosyltransferase (AHRD V3.3 *-* K4D4I9_SOLLC) 1 sly-miR5302b-3p Solyc08g074270.3.1 2.5 5.078 1 22 17 38 UUUUCAACUAUAGCAUUAUUUU UAAAUAAUAUUAUGGUUGGAAA Cleavage Cryptochrome DASH, chloroplastic/mitochondrial (AHRD V3.3 *** CRYD_SOLLC) 1 sly-miR5302b-3p Solyc08g007210.3.1 2.5 15.168 1 22 345 366 UUUUCAACUAUAGCAUUAUUUU UGGGUAGUGCAAUAGUUGAAAA Cleavage Transferase, putative (AHRD V3.3 *** B9T0L5_RICCO) 1 sly-miR5302b-3p Solyc07g041970.3.1 2.5 16.685 1 22 1277 1298 UUUUCAACUAUAGCAUUAUUUU GGACUAAUGCUAGAGUUGAGAA Translation Subtilisin-like protease (AHRD V3.3 *** W9R6D5_9ROSA) 1 sly-miR5302b-3p Solyc04g007000.1.1 2.5 16.453 1 22 1007 1028 UUUUCAACUAUAGCAUUAUUUU GUAAUAAUGUUGUUGUUGAGAA Translation AP2/B3 transcription factor family protein (AHRD V3.3 *** AT1G25560.1) 1 sly-miR5302b-3p Solyc02g082160.2.1 2.5 18.983 1 22 783 804 UUUUCAACUAUAGCAUUAUUUU CCAAUAAUGGUAUGGUUGAGGA Cleavage Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061F2D9_THECC) 1 sly-miR5302b-5p Solyc04g025288.1.1 2.5 14.417 1 22 291 312 UGAAAUGCUAUAGUUGGAAAGU AGUUUUCAGCUUUAGCAUUUUA Translation chromatin remodeling 38 (AHRD V3.3 --* AT3G42670.3) 1 sly-miR5302b-5p Solyc07g063270.3.1 2.5 20.475 1 22 812 833 UGAAAUGCUAUAGUUGGAAAGU AAUAUCCAACUUUGGCAUUUCA Translation GTP-binding family protein (AHRD V3.3 *** AT1G52980.1) 1 sly-miR5303 Solyc07g066670.3.1 2.5 17.482 1 21 3139 3159 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGAACUCUUCAAAUG Cleavage Ent-kaurene synthase (AHRD V3.3 *-* G5CV50_SOLLC) 1 sly-miR5303 Solyc10g051170.2.1 2.5 14.515 1 21 1263 1283 UUUUUGAAGAGUUCGAGCAAC GUUGCUUGAGUUUUUUAAAAA Cleavage Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR5303 Solyc03g005420.2.1 2.5 19.774 1 21 876 896 UUUUUGAAGAGUUCGAGCAAC GUUGCUUGAAUUCUUCAGGAG Cleavage SPFH/Band 7/PHB domain-containing membrane-associated protein family (AHRD V3.3 *** AT5G25260.1) 1 sly-miR5303 Solyc12g007100.2.1 2.5 16.852 1 21 1045 1065 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGAAUUCUUGGAAAA Cleavage Ankyrin repeat-containing protein (AHRD V3.3 *** A0A103Y2F4_CYNCS) 1 sly-miR5303 Solyc05g053750.2.1 2.5 16.86 1 21 674 694 UUUUUGAAGAGUUCGAGCAAC GUUGUGUGAACUCUUCAAGAA Cleavage Lipase (AHRD V3.3 *** K4C255_SOLLC) 1 sly-miR5303 Solyc05g054720.3.1 2.5 12.16 1 21 1111 1131 UUUUUGAAGAGUUCGAGCAAC GUUACUCGAACUCUCCAAAAA Cleavage Protein TIC 20, chloroplastic (AHRD V3.3 *** A0A0B2STH9_GLYSO) 1 sly-miR5303 Solyc01g008100.3.1 2.5 15.48 1 21 971 991 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGAACUGUUCAUAAA Translation Transferase, transferring glycosyl groups, putative (AHRD V3.3 *** B9RG20_RICCO) 1 sly-miR5303 Solyc03g033340.3.1 2.5 13.071 1 21 2024 2044 UUUUUGAAGAGUUCGAGCAAC GUUGUUCGGUUUCUUCAAAAA Cleavage Phosphatase 2C family protein (AHRD V3.3 *** A9PFH7_POPTR) 1 sly-miR5303 Solyc12g096370.2.1 2.5 24.064 1 21 2802 2822 UUUUUGAAGAGUUCGAGCAAC GCUGCUUGGACUCUUCGAAAA Cleavage Exocyst complex exo70-like protein (AHRD V3.3 *** G7I5R5_MEDTR) 1 sly-miR5303 Solyc05g051580.3.1 2.5 11.07 1 21 3343 3363 UUUUUGAAGAGUUCGAGCAAC GUUGGUCGGACUUUUCAAAAG Cleavage Phototropic-responsive NPH3 family protein (AHRD V3.3 *** AT5G10250.2) 1 sly-miR5303 Solyc10g078700.2.1 2.5 12.5 1 21 2470 2491 UUUUUGAAGAGUUCG-AGCAAC GCUGCUGUGAACUCUUCAAAAA Cleavage Squamosa promoter binding protein 15 1 sly-miR5303 Solyc09g091910.2.1 2.5 12.188 1 21 3545 3565 UUUUUGAAGAGUUCGAGCAAC GUUACUCAAACUUUUCAAAAA Cleavage Purple acid phosphatase (AHRD V3.3 *** K4CWL7_SOLLC) 1 sly-miR5303 Solyc02g094320.3.1 2.5 14.674 1 21 1128 1149 UUUUUGAAGAG-UUCGAGCAAC AUUGCUUGAAGUUUUUCAAAAA Translation Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A0B2R834_GLYSO) 1 sly-miR5303 Solyc03g005740.2.1 2.5 12.325 1 21 1104 1124 UUUUUGAAGAGUUCGAGCAAC AUUUCUCGAACUCUCCAAAAA Cleavage Microsomal signal peptidase 12 kDa subunit family protein (AHRD V3.3 *** B9HT84_POPTR) 1 sly-miR5303 Solyc03g117700.2.1 2.5 21.463 1 21 3988 4008 UUUUUGAAGAGUUCGAGCAAC CUUGGUCGGGUUCUUCAAAAA Cleavage Major facilitator superfamily protein (AHRD V3.3 *-* A0A061G9T3_THECC) 1 sly-miR5303 Solyc11g065110.2.1 2.5 6.138 1 21 698 718 UUUUUGAAGAGUUCGAGCAAC CUUGUUUGAAUUAUUCAAAAA Translation Homeobox leucine zipper protein (AHRD V3.3 *** G7K365_MEDTR) 1 sly-miR5303 Solyc05g056420.3.1 2.5 14.674 1 21 5245 5265 UUUUUGAAGAGUUCGAGCAAC UUUGUUCCGACUCUUUAAAAA Cleavage Diacylglycerol kinase (AHRD V3.3 *** K4C2W6_SOLLC) 1 sly-miR5303 Solyc01g008050.3.1 2.5 9.849 1 21 366 386 UUUUUGAAGAGUUCGAGCAAC AUUUCUUCAACUCUUCAAAAA Cleavage Trichome birefringence-like 27 (AHRD V3.3 *** A0A061E629_THECC) 1 sly-miR5304 Solyc01g094060.3.1 2.5 21.64 1 21 263 284 UCAAUG-CUACAUACUCAUCCC GGGAUGAUUAUGUAGACAUUGA Cleavage BEACH domain-containing protein (AHRD V3.3 *** A0A124SBD7_CYNCS) 1 sly-miR5304 Solyc07g053020.2.1 2.5 18.118 1 21 1385 1406 UCAAUGCUACAUAC-UCAUCCC UGGAUGAUGUGUGGAGCAUUGA Translation NBS-LRR type disease resistance protein (AHRD V3.3 *** Q19PJ0_POPTR) 1 sly-miR5304 Solyc07g053010.2.1 2.5 14.803 1 21 1403 1424 UCAAUGCUACAUAC-UCAUCCC UGGAUGAUGUAUGGAGUAUUGA Translation NBS-LRR type disease resistance protein (AHRD V3.3 *** Q19PJ0_POPTR) 1 sly-miR6022 Solyc02g093980.3.1 2.5 13.296 1 21 2624 2645 UGG-AAGGGAGAAUAUCCAGGA GCCUGGAUAUUCUCCCUUAUCG Cleavage nucleolar protein gar2-like protein (AHRD V3.3 *-* AT2G42320.2) 1 sly-miR6023 Solyc01g005710.2.1 2.5 16.126 1 22 251 272 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUUCUGGAA Cleavage LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.2) 1 sly-miR6023 Solyc01g014147.1.1 2.5 14.984 1 22 62 83 UUCCAUGAAAGAGUUUUUGGAU AUCCAGAAACUCUUUCGUCGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.2) 1 sly-miR6023 Solyc03g082780.2.1 2.5 17.17 1 22 29 50 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUUCUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.2) 1 sly-miR6023 Solyc01g006545.1.1 2.5 18.23 1 22 131 152 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUUCUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT3G24240.1) 1 sly-miR6023 Solyc01g005730.3.1 2.5 18.371 1 22 252 273 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGAACUCUUUUCUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1) 1 sly-miR6023 Solyc10g007210.1.1 2.5 17.177 1 22 71 92 UUCCAUGAAAGAGUUUUUGGAU AUCCAAGGACUCCUUUAUGGAA Translation LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 --* AT4G08850.2) 1 sly-miR6023 Solyc01g005755.1.1 2.5 18.263 1 22 227 248 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAAACUCGUUCCUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT2G33170.2) 1 sly-miR6023 Solyc04g015160.3.1 2.5 24.224 1 22 3247 3269 UUCCAUGAAAGAGUUU-UUGGAU UUCCAACGGACUUUUUCAUGGAA Cleavage C2 and GRAM domain-containing protein (AHRD V3.3 *** W9RQD0_9ROSA) 1 sly-miR6023 Solyc12g019470.2.1 2.5 23.725 1 22 517 539 UUCCAUGAAAGAGUUU-UUGGAU GGCCAGCAAACUCUCUCAUGGAA Translation Nonsense-mediated mRNA decay protein 2 isoform 2 (AHRD V3.3 *** A0A061EJP7_THECC) 1 sly-miR6024 Solyc11g006630.1.1 2.5 23.542 1 22 547 568 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCCAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR6024 Solyc04g015220.3.1 2.5 21.977 1 22 635 656 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUUUUGCCAAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR6024 Solyc11g006640.2.1 2.5 24.997 1 22 547 568 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUUGCCAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103Y7R3_CYNCS) 1 sly-miR6024 Solyc05g006620.3.1 2.5 24.784 1 22 952 973 UUUUAGCAAGAGUUGUUUUACC GGUAAAACAACUCUUUCUAAGG Cleavage Disease resistance protein (TIR-NBS-LRR class), putative (AHRD V3.3 *** G7LDU5_MEDTR) 1 sly-miR6024 Solyc11g071423.1.1 2.5 23.724 1 22 244 265 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACACUUGCUAAGG Translation Disease resistance protein (AHRD V3.3 *** A0A068EW38_SOLLC) 1 sly-miR6024 Solyc01g067165.1.1 2.5 18.194 1 22 544 565 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACACUUGCUGAGA Translation Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072VNI6_MEDTR) 1 sly-miR6024 Solyc06g062440.3.1 2.5 22.338 1 22 610 631 UUUUAGCAAGAGUUGUUUUACC GGAAAAACCACUCUUGCUAGAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR6024 Solyc04g011960.2.1 2.5 14.843 1 22 538 559 UUUUAGCAAGAGUUGUUUUACC GGCAAAACAACACUUGCUAGAA Translation Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** AT1G53350.1) 1 sly-miR6024 Solyc01g087200.3.1 2.5 22.054 1 22 532 553 UUUUAGCAAGAGUUGUUUUACC GGCAAAACGACUCUCGCUAAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR6024 Solyc08g005510.2.1 2.5 20.93 1 22 1529 1550 UUUUAGCAAGAGUUGUUUUACC GGUAAAACAACGCUAGCUAAAG Translation disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.1) 1 sly-miR6024 Solyc02g079950.3.1 2.5 20.525 1 22 302 323 UUUUAGCAAGAGUUGUUUUACC GCUAAAGCAGCUUUUGCUGAAG Cleavage photosystem II oxygen-evolving complex protein 3 1 sly-miR6024 Solyc07g032510.3.1 2.5 16.504 1 22 2053 2074 UUUUAGCAAGAGUUGUUUUACC AAUGAAACGACACUUGCUGAAA Translation Forkhead-associated (FHA) domain protein (AHRD V3.3 *** G7J4N3_MEDTR) 1 sly-miR6026 Solyc06g048960.3.1 2.5 10.197 1 22 596 617 UUCUUGGCUAGAGUUGUAUUGC GCAAUUCAACUCUAGCCAAUAA Cleavage Dicer-like 2a 1 sly-miR6026 Solyc05g050020.3.1 2.5 19.229 1 22 756 777 UUCUUGGCUAGAGUUGUAUUGC GAAAUAUGGCUCUAGCUAAGGA Cleavage RING/U-box superfamily protein (AHRD V3.3 *-* AT4G01270.1) 1 sly-miR6026 Solyc05g006630.3.1 2.5 18.403 1 22 881 903 UUCUUGGCUAGAG-UUGUAUUGC UUAAUCCAAUCUCUAGUCAAGAA Cleavage disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT1G27180.8) 1 sly-miR6027-3p Solyc04g008140.2.1 2.5 20.025 1 22 2328 2349 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCCGAAGGGUUUG Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9R1_SOLLC) 1 sly-miR6027-3p Solyc04g008180.2.1 2.5 19.836 1 22 1828 1849 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCCGAAGGGUUUG Cleavage Disease resistance protein (AHRD V3.3 *-* Q9SBC3_SOLLC) 1 sly-miR6027-3p Solyc04g008120.2.1 2.5 20.528 1 22 2519 2540 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCCGAAGGGUUUG Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q6_9SOLN) 1 sly-miR6027-3p Solyc10g047320.2.1 2.5 19.101 1 22 1522 1543 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUUGCGGAAGGAUUCA Translation Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** A0A072TW48_MEDTR) 1 sly-miR6027-3p Solyc01g088060.3.1 2.5 15.717 1 22 1603 1624 UGAAUCCUUCGGCUAUCCAUAA CUAUGGAUGGCAGAAGGAUUUG Translation Nbs-lrr resistance protein, putative (AHRD V3.3 *** A0A061FEU3_THECC) 1 sly-miR6027-5p Solyc10g049340.1.1 2.5 13.234 1 22 297 318 AUGGGUAGCACAAGGAUUAAUG UAUUGAUUCUAGUGCUACUCAU Cleavage LOW QUALITY:Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RPJ1_CAJCA) 1 sly-miR9470-3p Solyc02g091900.3.1 2.5 22.562 1 20 762 782 UUUGGCUCAUGGAUUUUA-GC GCAUAAAAUUUAUGGGCCAAA Cleavage Cysteine desulfurase-like protein (AHRD V3.3 *** G7K149_MEDTR) 1 sly-miR9470-3p Solyc10g005080.3.1 2.5 17.084 1 20 5641 5660 UUUGGCUCAUGGAUUUUAGC ACUAAAAUUAAUGAGCCAAA Translation Late elongated hypocotyl (AHRD V3.3 *** J9PV71_NICAT) 1 sly-miR9470-3p Solyc07g063970.3.1 2.5 19.82 1 20 1226 1245 UUUGGCUCAUGGAUUUUAGC GUUAAAAUCCGAGAGCCAAG Translation C2H2-like zinc finger protein (AHRD V3.3 *** G7JF39_MEDTR) 1 sly-miR9470-5p Solyc05g052690.3.1 2.5 18.487 1 21 1524 1544 UGAAAUCCAUGAGCCUAAACU AGAUGAGGCUCAUGGGUUUCA Cleavage Eukaryotic translation initiation factor 3 subunit F (AHRD V3.3 *** K4C1V0_SOLLC) 1 sly-miR9471a-3p Solyc05g054080.3.1 2.5 10.138 1 21 395 416 UUGGCUGAGUGAGCAUC-ACGG UCGUCGGUGUUCACUCAGUCAA Cleavage E3 ubiquitin-protein ligase-like protein (AHRD V3.3 *** A0A1B1LUK2_VITPS) 1 sly-miR9472-3p Solyc05g007250.3.1 2.5 20.759 1 21 818 838 UUCACAAUCUCUGCUGAAAAA GUUCUUAGCGGAGAUUGUGAG Cleavage 40S ribosomal protein S9, putative (AHRD V3.3 *** Q60CZ2_SOLDE) 1 sly-miR9472-5p Solyc01g094570.3.1 2.5 13.945 1 21 1095 1116 UUUCAGUAGA-CGUUGUGAAUA UGUUCAUAAUGGUCUACUGAAA Translation alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** AT3G49050.1) 1 sly-miR9472-5p Solyc02g085400.3.1 2.5 17.488 1 21 954 974 UUUCAGUAGACGUUGUGAAUA GCUUCGCAACGUUUACUGGAA Cleavage Sulfite exporter TauE/SafE family protein (AHRD V3.3 *** AT2G25737.1) 1 sly-miR9472-5p Solyc03g123500.4.1 2.5 21.921 1 21 1592 1613 UUUCAGUAGACGUUG-UGAAUA GAUUCAUCAAUGUCUAUUGGAA Cleavage GCC box binding protein C.4 1 sly-miR9472-5p Solyc07g040700.2.1 2.5 13.765 1 21 60 80 UUUCAGUAGACGUUGUGAAUA CAUUCACAAUCUCGACUGAAA Translation F-box/RNI-like/FBD-like domains-containing protein (AHRD V3.3 --* AT5G56370.3) 1 sly-miR9472-5p Solyc03g097990.3.1 2.5 20.213 1 21 378 398 UUUCAGUAGACGUUGUGAAUA GAGUCACAUUGUCUACUGAAA Cleavage RNA polymerase II subunit A C-terminal domain phosphatase SSU72 (AHRD V3.3 *** A0A0B0NIE4_GOSAR) 1 sly-miR9473-3p Solyc08g023500.3.1 2.5 15.639 1 21 1766 1787 AAACGAGUUCAG-AUUUACAGC GUUGUAGAUUCUGAAUUCGUUU Cleavage Metallo-hydrolase/oxidoreductase superfamily protein (AHRD V3.3 *** AT1G30300.4) 1 sly-miR9474-3p Solyc01g104530.3.1 2.5 18.16 1 22 3612 3634 UUUUGUUCGCAGAU-ACUACAGU CUUGUGUUUAUCUGCGAACAAAA Cleavage MAP kinase kinase kinase 10 1 sly-miR9474-5p Solyc01g096800.3.1 2.5 20.666 1 22 1276 1297 UGUAGAAGUCAUGAAUAAAAUG UAUUUUGUUCUUGAUUUUUACA Cleavage PETER PAN-like protein (AHRD V3.3 *** AT5G61770.3) 1 sly-miR9474-5p Solyc12g017510.2.1 2.5 12.531 1 22 3271 3292 UGUAGAAGUCAUGAAUAAAAUG UCUUUUAUUUUUGAUUUCUAUA Cleavage AT2G31890-like protein (AHRD V3.3 *** A0A0G4APR9_9ROSI) 1 sly-miR9475-3p Solyc08g021940.2.1 2.5 12.895 1 21 1618 1640 CUACAAUGUA-GAGAUC-GUUUU UAAACUGAUCUUGUACAUUGUAG Translation Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* AT5G11100.1) 1 sly-miR9476-3p Solyc01g090350.3.1 2.5 5.83 1 21 542 562 AAAAAGAUGCAGGACUAGACC UGUUUAAUUCUGCAUUUUUUU Cleavage non-specific lipid-transfer protein 1 sly-miR9476-5p Solyc06g054540.3.1 2.5 18.173 1 21 272 292 UCUAGUCCUGCAUCUUUUUUU AGGAGAAGAUGCAGGAUUAGG Cleavage CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** AT5G18650.1) 1 sly-miR9476-5p Solyc05g006950.3.1 2.5 11.765 1 21 1616 1636 UCUAGUCCUGCAUCUUUUUUU AAAGAAAGAUGCAGGAUCAGA Cleavage Embryo yellow protein (AHRD V3.3 *** K4BWM1_SOLLC) 1 sly-miR9476-5p Solyc03g119730.3.1 2.5 13.871 1 21 2065 2085 UCUAGUCCUGCAUCUUUUUUU AAAAAAAGACGCAGGACUGGU Cleavage Histone deacetylase (AHRD V3.3 *** A0A023IUN7_ARAHY) 1 sly-miR9476-5p Solyc09g031970.3.1 2.5 22.003 1 21 798 818 UCUAGUCCUGCAUCUUUUUUU GGAAAAAGAUGCAGCACUAGG Cleavage Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** K4CSQ2_SOLLC) 1 sly-miR9476-5p Solyc03g044273.1.1 2.5 10.134 1 21 3099 3120 UCUAGUCCUGCAUC-UUUUUUU AAGAAAAUGAUGCAUGACUAGA Cleavage RING/U-box superfamily protein (AHRD V3.3 *-* AT5G42940.2) 1 sly-miR9476-5p Solyc07g006650.3.1 2.5 18.811 1 21 433 453 UCUAGUCCUGCAUCUUUUUUU GAGAAAAGAUGAAGGAUUGGA Translation Xylose isomerase (AHRD V3.3 *** A0A0V0IEZ8_SOLCH) 1 sly-miR9476-5p Solyc01g111310.3.1 2.5 14.302 1 21 1563 1583 UCUAGUCCUGCAUCUUUUUUU UAAAAAAGAUGCAUGACUGGU Cleavage SlLAX2 1 sly-miR9477-3p Solyc09g065450.3.1 2.5 16.969 1 24 97 120 UUGGGAAAGGGAACAACUGAUAGU AUUAUCAGUUGUUCACGUUUCCAA Translation S-locus lectin protein kinase family protein (AHRD V3.3 --* AT1G11410.4) 1 sly-miR9477-3p Solyc03g082350.2.1 2.5 20.851 1 24 64 87 UUGGGAAAGGGAACAACUGAUAGU AUUCCCAAUUGUUUCCUUUCCCAA Cleavage LOW QUALITY:Avr9/Cf-9 rapidly elicited protein 65 (AHRD V3.3 *** Q9FQZ0_TOBAC) 1 sly-miR9477-3p Solyc04g071680.2.1 2.5 13.865 1 24 1518 1541 UUGGGAAAGGGAACAACUGAUAGU UCAAUUAGUUGGUCCCCUUCCCAA Cleavage Receptor protein kinase, putative (AHRD V3.3 *** B9SAG6_RICCO) 1 sly-miR9477-5p Solyc12g006840.2.1 2.5 22.884 1 24 3972 3995 UAUCCGUUGUUCCCUUUUCCUACC GGUAGGAAAAGGAAACAACUGAUA Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** K9LQT0_ARATH) 1 sly-miR9477-5p Solyc03g046340.3.1 2.5 21.588 1 24 1148 1171 UAUCCGUUGUUCCCUUUUCCUACC UGAGGGAAAAGGGAACAGCGUAUG Cleavage ATP-dependent zinc metalloprotease FtsH (AHRD V3.3 *** W9RE71_9ROSA) 1 sly-miR9478-3p Solyc01g007890.2.1 2.5 13.424 1 21 322 342 UUCGAUGACAUAUUUGAGCCU AGGUUCAAAUAAUUCAUCGAA Translation Zinc finger protein, putative (AHRD V3.3 *-* B9S7A8_RICCO) 1 sly-miR9478-3p Solyc10g078350.2.1 2.5 19.718 1 21 2167 2188 UUCGAUGACA-UAUUUGAGCCU CGGUUCAAGUAAUGUCAUUGAA Translation Transcription elongation factor (TFIIS) family protein (AHRD V3.3 *** G7L5V3_MEDTR) 1 sly-miR9479-5p Solyc08g078270.3.1 2.5 18.988 1 22 428 449 UCCAGUCCUCUACCCUUCUCCA AAGAGAAGGGAGGAGGGUUGGA Cleavage Protein-tyrosine phosphatase mitochondrial 1-like protein (AHRD V3.3 *** W9SEA4_9ROSA) 1 sly-miR156a Solyc04g082845.1.1 3.0 12.895 1 21 28 48 UUGACAGAAGAUAGAGAGCAC AAGCUCUCUAUUUUCUGUAAA Cleavage FAR1-related sequence 5 (AHRD V3.3 *** AT4G38180.1) 1 sly-miR156a Solyc07g045150.3.1 3.0 16.655 1 21 1185 1205 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUAUUUUCUGCUGA Cleavage period circadian protein (AHRD V3.3 *** AT3G07640.1) 1 sly-miR156a Solyc10g009080.3.1 3.0 13.3 1 21 502 522 UUGACAGAAGAUAGAGAGCAC ACGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 3 1 sly-miR156a Solyc10g047680.2.1 3.0 5.475 1 21 11 32 UUGACAGAAGAUAGAGA-GCAC UUGCCUCUUUAUCUUCUCUCAA Cleavage Clade XVII lectin receptor kinase (AHRD V3.3 *** K4D030_SOLLC) 1 sly-miR156a Solyc11g065490.2.1 3.0 16.47 1 21 1535 1555 UUGACAGAAGAUAGAGAGCAC UUGCUUUAUAUUUUCUGUCAU Cleavage Protein RETICULATA-RELATED 4, chloroplastic (AHRD V3.3 *** RER4_ARATH) 1 sly-miR156a Solyc07g062980.3.1 3.0 18.585 1 21 443 463 UUGACAGAAGAUAGAGAGCAC AUGCUUACUCUCUUCUGUCAG Cleavage Squamosa promoter-binding protein, putative (AHRD V3.3 *** B9T4B7_RICCO) 1 sly-miR156a Solyc11g007020.2.1 3.0 15.241 1 21 1913 1933 UUGACAGAAGAUAGAGAGCAC UUGUUCUUUCUCUACUGUCAA Cleavage mevalonate disphosphate decarboxylase 1 sly-miR156a Solyc06g068280.3.1 3.0 15.075 1 21 4793 4813 UUGACAGAAGAUAGAGAGCAC UUGAUCCUUAUCUUCUGUUAA Cleavage RNA helicase DEAD20 1 sly-miR156b Solyc04g082845.1.1 3.0 12.895 1 21 28 48 UUGACAGAAGAUAGAGAGCAC AAGCUCUCUAUUUUCUGUAAA Cleavage FAR1-related sequence 5 (AHRD V3.3 *** AT4G38180.1) 1 sly-miR156b Solyc07g045150.3.1 3.0 16.655 1 21 1185 1205 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUAUUUUCUGCUGA Cleavage period circadian protein (AHRD V3.3 *** AT3G07640.1) 1 sly-miR156b Solyc10g009080.3.1 3.0 13.3 1 21 502 522 UUGACAGAAGAUAGAGAGCAC ACGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 3 1 sly-miR156b Solyc10g047680.2.1 3.0 5.475 1 21 11 32 UUGACAGAAGAUAGAGA-GCAC UUGCCUCUUUAUCUUCUCUCAA Cleavage Clade XVII lectin receptor kinase (AHRD V3.3 *** K4D030_SOLLC) 1 sly-miR156b Solyc11g065490.2.1 3.0 16.47 1 21 1535 1555 UUGACAGAAGAUAGAGAGCAC UUGCUUUAUAUUUUCUGUCAU Cleavage Protein RETICULATA-RELATED 4, chloroplastic (AHRD V3.3 *** RER4_ARATH) 1 sly-miR156b Solyc07g062980.3.1 3.0 18.585 1 21 443 463 UUGACAGAAGAUAGAGAGCAC AUGCUUACUCUCUUCUGUCAG Cleavage Squamosa promoter-binding protein, putative (AHRD V3.3 *** B9T4B7_RICCO) 1 sly-miR156b Solyc11g007020.2.1 3.0 15.241 1 21 1913 1933 UUGACAGAAGAUAGAGAGCAC UUGUUCUUUCUCUACUGUCAA Cleavage mevalonate disphosphate decarboxylase 1 sly-miR156b Solyc06g068280.3.1 3.0 15.075 1 21 4793 4813 UUGACAGAAGAUAGAGAGCAC UUGAUCCUUAUCUUCUGUUAA Cleavage RNA helicase DEAD20 1 sly-miR156c Solyc04g082845.1.1 3.0 12.895 1 21 28 48 UUGACAGAAGAUAGAGAGCAC AAGCUCUCUAUUUUCUGUAAA Cleavage FAR1-related sequence 5 (AHRD V3.3 *** AT4G38180.1) 1 sly-miR156c Solyc07g045150.3.1 3.0 16.655 1 21 1185 1205 UUGACAGAAGAUAGAGAGCAC UUGCUCUCUAUUUUCUGCUGA Cleavage period circadian protein (AHRD V3.3 *** AT3G07640.1) 1 sly-miR156c Solyc10g009080.3.1 3.0 13.3 1 21 502 522 UUGACAGAAGAUAGAGAGCAC ACGCUCUCUCUCUUCUGUCAU Cleavage Squamosa promoter binding protein 3 1 sly-miR156c Solyc10g047680.2.1 3.0 5.475 1 21 11 32 UUGACAGAAGAUAGAGA-GCAC UUGCCUCUUUAUCUUCUCUCAA Cleavage Clade XVII lectin receptor kinase (AHRD V3.3 *** K4D030_SOLLC) 1 sly-miR156c Solyc11g065490.2.1 3.0 16.47 1 21 1535 1555 UUGACAGAAGAUAGAGAGCAC UUGCUUUAUAUUUUCUGUCAU Cleavage Protein RETICULATA-RELATED 4, chloroplastic (AHRD V3.3 *** RER4_ARATH) 1 sly-miR156c Solyc07g062980.3.1 3.0 18.585 1 21 443 463 UUGACAGAAGAUAGAGAGCAC AUGCUUACUCUCUUCUGUCAG Cleavage Squamosa promoter-binding protein, putative (AHRD V3.3 *** B9T4B7_RICCO) 1 sly-miR156c Solyc11g007020.2.1 3.0 15.241 1 21 1913 1933 UUGACAGAAGAUAGAGAGCAC UUGUUCUUUCUCUACUGUCAA Cleavage mevalonate disphosphate decarboxylase 1 sly-miR156c Solyc06g068280.3.1 3.0 15.075 1 21 4793 4813 UUGACAGAAGAUAGAGAGCAC UUGAUCCUUAUCUUCUGUUAA Cleavage RNA helicase DEAD20 1 sly-miR156d-3p Solyc02g082720.3.1 3.0 15.297 1 22 1709 1730 GCUCACUGCUCUAUCUGUCACC GGUUGCAGAUAGCGUAGUGAGC Translation Trypsin-like peptidase domain protein (AHRD V3.3 *** G7KBB1_MEDTR) 1 sly-miR156d-3p Solyc02g067680.1.1 3.0 16.461 1 22 828 850 GCUCACUGCUCUA-UCUGUCACC UAUGGUAGACUUGAGCAGUGAGC Cleavage RING/U-box superfamily protein (AHRD V3.3 *** AT5G40250.1) 1 sly-miR156d-5p Solyc10g009080.3.1 3.0 13.485 1 20 502 521 UGACAGAAGAGAGUGAGCAC ACGCUCUCUCUCUUCUGUCA Cleavage Squamosa promoter binding protein 3 1 sly-miR156d-5p Solyc09g055250.3.1 3.0 7.793 1 20 1071 1090 UGACAGAAGAGAGUGAGCAC UUGCUCACUUUCAUUUGUCA Cleavage Reticulon-like protein (AHRD V3.3 *** K4CT24_SOLLC) 1 sly-miR156d-5p Solyc03g097670.3.1 3.0 10.817 1 20 3543 3562 UGACAGAAGAGAGUGAGCAC GUGCUCAUUCCCUUCUCUCA Translation ATP/DNA binding protein (AHRD V3.3 *** AT3G48770.2) 1 sly-miR156d-5p Solyc01g081320.3.1 3.0 18.309 1 20 3661 3680 UGACAGAAGAGAGUGAGCAC GUACUCAAUCUCUUUUGUUA Cleavage Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RJS7_RICCO) 1 sly-miR156e-3p Solyc12g006600.2.1 3.0 12.533 1 21 326 347 GCUUACUCUCUAUC-UGUCACC GGUGACAUGAGAGAGAGUGAGU Cleavage Zinc finger protein-like protein (AHRD V3.3 *** Q3S345_GOSHI) 1 sly-miR156e-5p Solyc01g044545.1.1 3.0 13.698 1 20 11 32 UGAUAGAAGA--GAGUGAGCAC GUGAUCACUCAGUCUUCUAUCA Translation Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151STD9_CAJCA) 1 sly-miR156e-5p Solyc05g013340.3.1 3.0 12.363 1 20 1639 1658 UGAUAGAAGAGAGUGAGCAC GUGUUCAUUUUCUUGUAUCA Cleavage AP-1 complex subunit mu-1 (AHRD V3.3 *** A0A1D1ZCP5_9ARAE) 1 sly-miR156e-5p Solyc01g097760.3.1 3.0 8.345 1 20 1216 1235 UGAUAGAAGAGAGUGAGCAC GUGCUUACUCUUGUUUAUUA Cleavage 60S ribosomal protein L7A-like protein (AHRD V3.3 *** Q2XPW4_SOLTU) 1 sly-miR156e-5p Solyc11g007960.2.1 3.0 10.654 1 20 1851 1870 UGAUAGAAGAGAGUGAGCAC GUACUUGCUUUCUUUUAUCA Cleavage Acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A151T0U9_CAJCA) 1 sly-miR156e-5p Solyc03g097670.3.1 3.0 10.817 1 20 3543 3562 UGAUAGAAGAGAGUGAGCAC GUGCUCAUUCCCUUCUCUCA Translation ATP/DNA binding protein (AHRD V3.3 *** AT3G48770.2) 1 sly-miR156e-5p Solyc10g083340.2.1 3.0 7.447 1 20 349 369 UGAUAGAAGA-GAGUGAGCAC GUUCUCACUUAUUUUCUAUCA Translation Myb family transcription factor APL (AHRD V3.3 *** A0A0B2R6R9_GLYSO) 1 sly-miR156e-5p Solyc01g098610.3.1 3.0 15.498 1 20 3014 3033 UGAUAGAAGAGAGUGAGCAC GAGCUUGCGCUCUUCUAUCA Cleavage glutathione synthetase 2 1 sly-miR159 Solyc07g065970.2.1 3.0 20.029 1 21 711 731 UUUGGAUUGAAGGGAGCUCUA UAGAGCUCUCUACGAUCUGAA Translation Chaperone protein DNAj, putative (AHRD V3.3 *-* B9SXA3_RICCO) 1 sly-miR159 Solyc07g062685.1.1 3.0 15.003 1 21 476 496 UUUGGAUUGAAGGGAGCUCUA UGGAGCCCCCUUCAAACCAAA Cleavage Aspartyl/glutamyl-tRNA (Asn/Gln) amidotransferase subunit B (AHRD V3.3 *** A0A0B0PLB6_GOSAR) 1 sly-miR159 Solyc05g012827.1.1 3.0 12.374 1 21 435 455 UUUGGAUUGAAGGGAGCUCUA UGGAGUUCUUUCCAAUCCAAA Translation Plant transposase (Ptta/En/Spm family) (AHRD V3.3 *-* AT1G40087.1) 1 sly-miR159 Solyc11g072060.2.1 3.0 24.27 1 21 914 934 UUUGGAUUGAAGGGAGCUCUA UGGAGCUCCCUUCUUUCCAAA Cleavage MYB-related transcription factor (AHRD V3.3 *** A0A059PSR6_SALMI) 1 sly-miR159 Solyc12g014120.2.1 3.0 11.99 1 21 1070 1090 UUUGGAUUGAAGGGAGCUCUA UGGAGCCCCCUUCAAACCAAA Cleavage Actin cytoskeleton-regulatory complex protein pan1, putative isoform 2 (AHRD V3.3 *** A0A061F841_THECC) 1 sly-miR159 Solyc06g008320.3.1 3.0 16.006 1 21 2008 2028 UUUGGAUUGAAGGGAGCUCUA UCGAGUUUCUUUCAAUCCGAA Cleavage Casein kinase, putative (AHRD V3.3 *-* B9SV24_RICCO) 1 sly-miR159 Solyc03g033720.3.1 3.0 15.143 1 21 2122 2143 UUUGGAUUG-AAGGGAGCUCUA UACAGCUCCUUUACAAUUCAAA Translation HECT-like ubiquitin-conjugating enzyme (E2)-binding protein (AHRD V3.3 *** AT3G26750.1) 1 sly-miR159 Solyc09g082890.2.1 3.0 12.778 1 21 159 179 UUUGGAUUGAAGGGAGCUCUA UGGAGCUGCCUACAAUCCAAG Translation LOW QUALITY:Calcium-transporting ATPase (AHRD V3.3 *-* M1DHY7_SOLTU) 1 sly-miR159 Solyc03g043890.3.1 3.0 13.534 1 21 526 546 UUUGGAUUGAAGGGAGCUCUA UAAAGUUACCUUUAAUCCAAA Cleavage 1-aminocyclopropane-1-carboxylate synthase 1 sly-miR159 Solyc05g006830.3.1 3.0 17.953 1 21 1935 1955 UUUGGAUUGAAGGGAGCUCUA GUGAGUUCCCUUCCGUCCAAA Cleavage Thioredoxin family protein (AHRD V3.3 *** B9IJS4_POPTR) 1 sly-miR159 Solyc06g064590.2.1 3.0 14.293 1 21 923 943 UUUGGAUUGAAGGGAGCUCUA GAGAGCUUCUUUGAAUUCAAG Translation bHLH transcription factor 045 1 sly-miR159 Solyc09g013080.3.1 3.0 22.719 1 21 1687 1707 UUUGGAUUGAAGGGAGCUCUA GGGAGUUCCCAUUGAUCCAAA Translation Alpha-carboxyltransferase subunit (AHRD V3.3 *** C9EI97_JATCU) 1 sly-miR159 Solyc06g073520.3.1 3.0 13.057 1 21 3885 3905 UUUGGAUUGAAGGGAGCUCUA CAAAGCUUUCUUUGAUCCAAA Cleavage Solute carrier family 35 protein (AHRD V3.3 *** G7KWQ4_MEDTR) 1 sly-miR159 Solyc01g106440.3.1 3.0 12.178 1 21 4360 4381 UUUGGAUUGAAGGGAG-CUCUA AAGAAACUCCCUUCAAUCUGAA Cleavage S-acyltransferase (AHRD V3.3 *** K4B2L2_SOLLC) 1 sly-miR160a Solyc01g057045.1.1 3.0 14.603 1 21 508 528 UGCCUGGCUCCCUGUAUGCCA AGGAAUGCAGGGAGCCAGGAA Cleavage LOW QUALITY:Transposon TX1 uncharacterized (AHRD V3.3 *-* A0A151TBI3_CAJCA) 1 sly-miR162 Solyc09g065170.2.1 3.0 12.486 1 21 1784 1805 UCGAUAAACCUCUGCAU-CCAG UUGGUAUGUAGAGGUUUAGCGA Cleavage 30S ribosomal protein S7, chloroplastic (AHRD V3.3 --* A0A088CKE9_9CHLO) 1 sly-miR162 Solyc06g009530.3.1 3.0 11.926 1 21 2093 2113 UCGAUAAACCUCUGCAUCCAG CUGGGAGCAGAGUUUUAUUGA Translation Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *-* B9RNC1_RICCO) 1 sly-miR162 Solyc01g080500.2.1 3.0 16.71 1 21 1161 1181 UCGAUAAACCUCUGCAUCCAG AUGGAUGGAGGGGUUUAUUGU Cleavage LOW QUALITY:Plant/F10N7-170 protein, putative (AHRD V3.3 *** G7IFN2_MEDTR) 1 sly-miR162 Solyc11g064835.1.1 3.0 16.86 1 21 930 950 UCGAUAAACCUCUGCAUCCAG CUUGAUGCACAGAUUUAUCGA Translation Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *-* AT2G23060.1) 1 sly-miR164a-3p Solyc03g118230.2.1 3.0 11.453 1 21 332 352 CAUGUGCCUGUUUUCCCCAUC CAUGGGAGACACAGGCAUAUG Cleavage Homeodomain-like protein (AHRD V3.3 *** A0A103XY92_CYNCS) 1 sly-miR164a-3p Solyc05g011940.3.1 3.0 13.491 1 21 1289 1309 CAUGUGCCUGUUUUCCCCAUC UAUGGGGAGAAGAUGUACAUG Translation SlCytochrome P450 1 sly-miR164a-5p Solyc06g069385.1.1 3.0 23.06 1 21 187 208 UGGAGAAGCAGGG-CACGUGCA UACACGUGUCCCUCCUUCUCCA Translation Dof zinc finger protein (AHRD V3.3 *** W9RP28_9ROSA) 1 sly-miR164a-5p Solyc01g080840.3.1 3.0 19.079 1 21 4926 4946 UGGAGAAGCAGGGCACGUGCA AGCACGGGCUUUGCUUUUCUA Cleavage Protein translocase subunit SecA (AHRD V3.3 *** K4AXX7_SOLLC) 1 sly-miR164b-3p Solyc01g108610.3.1 3.0 23.093 1 21 2914 2935 CACGUGUUC-UCCUUCUCCAAC GUUGGAGAAGGAAGAGCGCGUC Translation Cyclin-dependent kinase inhibitor (AHRD V3.3 *** A0A103YKD7_CYNCS) 1 sly-miR164b-3p Solyc02g070260.3.1 3.0 15.905 1 21 5481 5502 CACGUGUUCUCCUUC-UCCAAC UUUGGUUGAAGGAGAACGUGUG Cleavage Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103XCI4_CYNCS) 1 sly-miR164b-3p Solyc12g040680.2.1 3.0 13.817 1 21 440 461 CACGUGUUCUC-CUUCUCCAAC AUUGGAGAAGAGAGAAAGCGUG Translation mitogen-activated protein kinase 16 1 sly-miR164b-3p Solyc06g072160.3.1 3.0 11.598 1 21 400 420 CACGUGUUCUCCUUCUCCAAC UUUGUAGAAGGGGACCACGUG Cleavage Alcohol dehydrogenase family protein (AHRD V3.3 *** B9H299_POPTR) 1 sly-miR164b-3p Solyc10g044450.2.1 3.0 21.118 1 21 1713 1733 CACGUGUUCUCCUUCUCCAAC AUUGGGGAAGGAAAACCCGUG Translation Regulator of nonsense transcripts 3A (AHRD V3.3 *** A0A151T884_CAJCA) 1 sly-miR164b-3p Solyc06g007170.3.1 3.0 11.779 1 21 1716 1736 CACGUGUUCUCCUUCUCCAAC UUUGGAGAAAAAGAACACGUA Translation Trichome birefringence-like protein (AHRD V3.3 *** G7IKB9_MEDTR) 1 sly-miR164b-5p Solyc06g069385.1.1 3.0 23.06 1 21 187 208 UGGAGAAGCAGGG-CACGUGCA UACACGUGUCCCUCCUUCUCCA Translation Dof zinc finger protein (AHRD V3.3 *** W9RP28_9ROSA) 1 sly-miR164b-5p Solyc01g080840.3.1 3.0 19.079 1 21 4926 4946 UGGAGAAGCAGGGCACGUGCA AGCACGGGCUUUGCUUUUCUA Cleavage Protein translocase subunit SecA (AHRD V3.3 *** K4AXX7_SOLLC) 1 sly-miR166a Solyc07g045070.3.1 3.0 16.014 1 21 1597 1618 UCGGACCAG-GCUUCAUUCCCC UGAGAAUGAAGCAUUGGUUCGA Translation S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *** A0A097PSG8_PRUPE) 1 sly-miR166b Solyc07g045070.3.1 3.0 16.014 1 21 1597 1618 UCGGACCAG-GCUUCAUUCCCC UGAGAAUGAAGCAUUGGUUCGA Translation S-adenosyl-L-methionine-dependent methyltransferase superfamily protein (AHRD V3.3 *** A0A097PSG8_PRUPE) 1 sly-miR166c-3p Solyc02g069830.3.1 3.0 19.296 1 21 746 768 UCGGACCAGGCUUCAUUCC--UC GAUUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166c-3p Solyc02g024070.3.1 3.0 21.121 1 21 1227 1249 UCGGACCAGGCUUCAUUCC--UC GAUUGGGAUGAAGCCUGGUCCGG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H963_ZINVI) 1 sly-miR166c-5p Solyc05g005900.3.1 3.0 17.939 1 21 1287 1307 GGGAUGUUGUCUGGCUCGACA UGUUGAGACAGACAACAUUUU Cleavage Acyl-CoA N-acyltransferases (NAT) superfamily protein (AHRD V3.3 *** AT1G24040.3) 1 sly-miR167a Solyc10g081870.2.1 3.0 14.058 1 21 566 587 UGAAGCUGCCAG-CAUGAUCUA GAGAUCAUGUCUGGUAGCCUCA Cleavage Digalactosyldiacylglycerol synthase 1 (AHRD V3.3 *-* W8SVK3_TOBAC) 1 sly-miR167a Solyc06g035710.1.1 3.0 18.905 1 21 1061 1081 UGAAGCUGCCAGCAUGAUCUA UAGGGCUUGCUGGCAGCUUCG Cleavage Protein DETOXIFICATION (AHRD V3.3 *** K4C4U3_SOLLC) 1 sly-miR167a Solyc05g052590.1.1 3.0 18.319 1 21 1465 1486 UGAAGCUGCCAGCA-UGAUCUA AAGAUUGGUGCUGGCAGCUUUG Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** W0TR71_ACAMN) 1 sly-miR167a Solyc03g007790.3.1 3.0 21.107 1 21 1164 1184 UGAAGCUGCCAGCAUGAUCUA UAGAUCAAGCUGGAAGCUUUG Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** K4BEK1_SOLLC) 1 sly-miR167a Solyc06g036780.3.1 3.0 21.536 1 21 972 992 UGAAGCUGCCAGCAUGAUCUA GUGAUUCUGCUGGUAGCUUCA Cleavage magnesium transporter, putative (DUF803) (AHRD V3.3 *** AT5G11960.1) 1 sly-miR167a Solyc04g008340.2.1 3.0 15.887 1 21 1629 1651 UGAAGCUGCCAGCA-UG-AUCUA GGGAUUCACUGCUGGCGGCUUCA Cleavage IAA-alanine resistance protein 1 (AHRD V3.3 *** IAR1_ARATH) 1 sly-miR167a Solyc04g077220.3.1 3.0 18.991 1 21 337 357 UGAAGCUGCCAGCAUGAUCUA GAGAUCAUGCUAGUAGUUUUG Translation Homeobox-leucine zipper protein family (AHRD V3.3 *** AT4G37790.1) 1 sly-miR167a Solyc04g073990.3.1 3.0 17.218 1 21 1101 1121 UGAAGCUGCCAGCAUGAUCUA GAGAAUAUGCUGGUGGCUUUA Cleavage annexin p34 1 sly-miR167a Solyc07g053120.3.1 3.0 24.615 1 21 1271 1292 UGAAGCUGCCAGCAU-GAUCUA GAGAACUAUGCUGGUGGCUUCA Cleavage Serine/threonine-protein kinase (AHRD V3.3 *-* K4CFL1_SOLLC) 1 sly-miR167b-3p Solyc04g011460.2.1 3.0 18.18 1 21 661 681 AGGUCAUCUAGCAGCUUCAAU AUUGAAGUUGUUAGGUCACCU Cleavage HSP20-like chaperones superfamily protein (AHRD V3.3 *** AT2G37570.1) 1 sly-miR167b-3p Solyc05g012410.2.1 3.0 13.621 1 21 267 287 AGGUCAUCUAGCAGCUUCAAU UUUGAAGCUGCUGGAUCGCUU Cleavage Chromatin modification-related protein EAF7 (AHRD V3.3 *** A0A1D1ZI31_9ARAE) 1 sly-miR167b-3p Solyc05g012400.3.1 3.0 17.715 1 21 208 228 AGGUCAUCUAGCAGCUUCAAU UUUGAAGCUGCUGGAUCGCUU Cleavage Chromatin modification-related protein EAF7 (AHRD V3.3 *** A0A1D1ZI31_9ARAE) 1 sly-miR167b-3p Solyc01g058390.3.1 3.0 20.101 1 21 1312 1332 AGGUCAUCUAGCAGCUUCAAU GUUGAAGAAGUUAGGUGACCU Cleavage Galactokinase, putative (AHRD V3.3 *** B9RZT4_RICCO) 1 sly-miR167b-3p Solyc02g021550.3.1 3.0 14.729 1 21 972 992 AGGUCAUCUAGCAGCUUCAAU UUUGAAGCUUUUUGAUGACUU Translation Eukaryotic translation initiation factor 4E (AHRD V3.3 *** Q00LS7_NICBE) 1 sly-miR167b-5p Solyc11g010600.2.1 3.0 21.015 1 22 1484 1506 UAAAGCUGCCAGCA-UGAUCUGG UUGGAUUGCUGCUGGCAGCUUUG Cleavage O-fucosyltransferase family protein (AHRD V3.3 *** AT5G65470.1) 1 sly-miR167b-5p Solyc06g075420.1.1 3.0 15.772 1 22 643 664 UAAAGCUGCCAGCAUGAUCUGG AGAGAUCAUGCUGGUAAUUUUG Cleavage LOW QUALITY:phosphoglycerate/bisphosphoglycerate mutase family protein (AHRD V3.3 --* AT5G22620.6) 1 sly-miR167b-5p Solyc05g050830.2.1 3.0 20.154 1 22 10 33 UAAAGCUGCCA-G-CAUGAUCUGG CGAGCUCAUGACGUGGCAGCUUUA Translation Ethylene-responsive transcription factor4 1 sly-miR167b-5p Solyc09g018970.1.1 3.0 15.187 1 22 31 52 UAAAGCUGCCAGCAUGAUCUGG AAAGAUAAUGUUGACAGUUUUA Translation LOW QUALITY:Kinase interacting (KIP1-like) family protein (AHRD V3.3 --* G7KLR5_MEDTR) 1 sly-miR168a-3p Solyc05g015840.3.1 3.0 17.066 1 21 763 784 CCUGCCUUGCAUCAACU-GAAU AUUCCAGUUCAUGCAAGGCAGU Cleavage Squamosa promoter binding protein 13 1 sly-miR168a-3p Solyc12g096670.2.1 3.0 21.454 1 21 568 589 CCUGCCUUGCAUCAAC-UGAAU CUUCAUGUUGCAGCAAGGCAGG Translation Ankyrin repeat family protein (AHRD V3.3 *** AT2G31820.1) 1 sly-miR168b-3p Solyc06g076700.1.1 3.0 22.499 1 21 872 892 CCCGCCUUGCAUCAACUGAAU UUUCAGUUGAUGCAGGGCGAU Cleavage LOW QUALITY:UPF0503 protein, chloroplastic (AHRD V3.3 *** A0A0B2P4J5_GLYSO) 1 sly-miR168b-3p Solyc03g051785.1.1 3.0 24.881 1 21 332 352 CCCGCCUUGCAUCAACUGAAU UUUUAGGUGAUGCUAGGUGGG Cleavage Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061EX66_THECC) 1 sly-miR168b-3p Solyc01g009235.1.1 3.0 21.01 1 21 3312 3333 CCCGCCUUGCA-UCAACUGAAU UUUAAGUUUAGUGCAAGGCGGG Translation Aldehyde oxidase (AHRD V3.3 *** Q9FV23_SOLLC) 1 sly-miR169a Solyc09g075020.3.1 3.0 13.726 1 21 3124 3144 CAGCCAAGGAUGACUUGCCGG AUGGCAAGUGAUUAUUGGCUG Cleavage Multidrug resistance protein ABC transporter family protein (AHRD V3.3 *** G7IF78_MEDTR) 1 sly-miR169b Solyc01g006930.3.1 3.0 24.426 1 21 2833 2853 UAGCCAAGGAUGACUUGCCUG UGGGCAGUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit A-10, putative (AHRD V3.3 *** A0A061EVQ6_THECC) 1 sly-miR169b Solyc01g008490.3.1 3.0 23.6 1 21 610 630 UAGCCAAGGAUGACUUGCCUG GUGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169b Solyc12g006040.2.1 3.0 13.504 1 21 677 697 UAGCCAAGGAUGACUUGCCUG UAGGUAAGACAACUUUGGCUA Translation NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) 1 sly-miR169c Solyc08g075730.3.1 3.0 19.44 1 21 577 597 CAGCCAAGGAUGACUUGCCGA ACCGCAAGUUAUUAUUGGCUG Cleavage Anamorsin homolog (AHRD V3.3 *** K4CMU0_SOLLC) 1 sly-miR169c Solyc09g075020.3.1 3.0 13.726 1 21 3124 3144 CAGCCAAGGAUGACUUGCCGA AUGGCAAGUGAUUAUUGGCUG Cleavage Multidrug resistance protein ABC transporter family protein (AHRD V3.3 *** G7IF78_MEDTR) 1 sly-miR169d Solyc01g006930.3.1 3.0 24.426 1 21 2833 2853 UAGCCAAGGAUGACUUGCCUA UGGGCAGUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit A-10, putative (AHRD V3.3 *** A0A061EVQ6_THECC) 1 sly-miR169d Solyc01g008490.3.1 3.0 23.6 1 21 610 630 UAGCCAAGGAUGACUUGCCUA GUGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169d Solyc06g068930.2.1 3.0 24.402 1 21 595 615 UAGCCAAGGAUGACUUGCCUA CUCGCAAGGCAUCCUUGGCUA Cleavage Jasmonate ZIM domain protein g (AHRD V3.3 *** I3WTA5_NICAT) 1 sly-miR169d Solyc12g006040.2.1 3.0 13.504 1 21 677 697 UAGCCAAGGAUGACUUGCCUA UAGGUAAGACAACUUUGGCUA Translation NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) 1 sly-miR169e-3p Solyc03g115000.3.1 3.0 13.677 1 21 295 316 UGGCAAGCAU-CUUUGGCGACU GAUCGUCAAAGUAUGCUUGCUA Translation Longifolia protein (AHRD V3.3 *** A0A072UUU5_MEDTR) 1 sly-miR169e-3p Solyc03g124010.3.1 3.0 18.514 1 21 1647 1667 UGGCAAGCAUCUUUGGCGACU AGUGGUGAAAGAUGCUUGCCG Cleavage P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative (AHRD V3.3 *** A0A061GGV8_THECC) 1 sly-miR169e-5p Solyc01g008490.3.1 3.0 23.6 1 22 609 630 UAGCCAAGGAUGACUUGCCUUU GGUGGCAAUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR169e-5p Solyc01g006930.3.1 3.0 24.426 1 22 2832 2853 UAGCCAAGGAUGACUUGCCUUU AUGGGCAGUUCAUCCUUGGCUU Cleavage Nuclear transcription factor Y subunit A-10, putative (AHRD V3.3 *** A0A061EVQ6_THECC) 1 sly-miR169e-5p Solyc12g006040.2.1 3.0 13.504 1 22 676 697 UAGCCAAGGAUGACUUGCCUUU AUAGGUAAGACAACUUUGGCUA Translation NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) 1 sly-miR171a Solyc09g011070.2.1 3.0 17.25 1 21 582 602 UGAUUGAGCCGUGCCAAUAUC UAUAUUGGCAUGGGUUGAUUA Cleavage clade XI lectin receptor kinase 1 sly-miR171b Solyc03g083000.3.1 3.0 15.915 1 21 26 46 UUGAGCCGUGCCAAUAUCACG AGUGAUGUUGGCAAGGUUUGA Cleavage transmembrane protein (AHRD V3.3 *** AT2G46550.3) 1 sly-miR171c Solyc03g081220.1.1 3.0 20.7 1 21 453 473 UAUUGGUGCGGUUCAAUGAGA CCUUGUUGAAUCGCACCAAGA Cleavage LOW QUALITY:RING-H2 zinc finger protein (AHRD V3.3 *** AT5G24460.1) 1 sly-miR171e Solyc06g075510.3.1 3.0 20.058 1 21 1556 1577 UUGAGCCGCGUCAAUA-UCUCU AGAGAGUAUUGAUGCUGCUCAA Cleavage APETALA2e 1 sly-miR171e Solyc06g075480.3.1 3.0 15.165 1 21 240 261 UUGAGCCGCGUCAAUA-UCUCU GGAGAGUAUUGAUGCUGCUCAA Cleavage Major facilitator superfamily protein (AHRD V3.3 *** AT3G45700.1) 1 sly-miR171e Solyc06g075470.2.1 3.0 17.746 1 21 903 924 UUGAGCCGCGUCAAUA-UCUCU GGAGAGUAUUGAUGCUGCUCAA Cleavage Major facilitator superfamily protein (AHRD V3.3 *-* AT3G45690.1) 1 sly-miR171e Solyc11g013150.1.1 3.0 24.025 1 21 378 398 UUGAGCCGCGUCAAUAUCUCU AGUGAUAUUGGUUCGGCUCAA Translation GRAS family transcription factor (AHRD V3.3 *** A0A061FHT3_THECC) 1 sly-miR172a Solyc07g064490.3.1 3.0 16.033 1 21 286 308 AGAAUCUU-GAU-GAUGCUGCAU AUGCAGCAUCCAACGAAGAUUCU Translation CRS2-associated factor 1 (AHRD V3.3 *** A0A072THI3_MEDTR) 1 sly-miR172a Solyc03g114960.3.1 3.0 23.335 1 21 357 378 AGAAU-CUUGAUGAUGCUGCAU UUGCAGCAACAUCAAGCAUUUU Cleavage ABC transporter B family protein (AHRD V3.3 *** A0A072URQ8_MEDTR) 1 sly-miR172a Solyc03g118430.3.1 3.0 17.592 1 21 3192 3213 AGAAU-CUUGAUGAUGCUGCAU UUGCAGCAUCAACAAGUAUUUU Translation Insulinase (Peptidase family M16) family protein (AHRD V3.3 *** AT5G42390.1) 1 sly-miR172a Solyc03g097410.1.1 3.0 22.275 1 21 66 87 AGAAUCUU-GAUGAUGCUGCAU AAGCAGCUUCAUCCAAGAUUCU Cleavage Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** K4BJF8_SOLLC) 1 sly-miR172a Solyc02g023950.3.1 3.0 14.313 1 21 3928 3948 AGAAUCUUGAUGAUGCUGCAU CUGAGGCAUCAUCAACAUUCU Cleavage Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** AT4G20940.1) 1 sly-miR172a Solyc03g121590.3.1 3.0 21.133 1 21 1970 1991 AGAAUCUUGAUGAU-GCUGCAU GUUCAGCCAUGAUCAAGAUUCU Cleavage Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4BMV8_SOLLC) 1 sly-miR172b Solyc07g064490.3.1 3.0 16.033 1 21 286 308 AGAAUCUU-GAU-GAUGCUGCAU AUGCAGCAUCCAACGAAGAUUCU Translation CRS2-associated factor 1 (AHRD V3.3 *** A0A072THI3_MEDTR) 1 sly-miR172b Solyc03g114960.3.1 3.0 23.335 1 21 357 378 AGAAU-CUUGAUGAUGCUGCAU UUGCAGCAACAUCAAGCAUUUU Cleavage ABC transporter B family protein (AHRD V3.3 *** A0A072URQ8_MEDTR) 1 sly-miR172b Solyc03g118430.3.1 3.0 17.592 1 21 3192 3213 AGAAU-CUUGAUGAUGCUGCAU UUGCAGCAUCAACAAGUAUUUU Translation Insulinase (Peptidase family M16) family protein (AHRD V3.3 *** AT5G42390.1) 1 sly-miR172b Solyc03g097410.1.1 3.0 22.275 1 21 66 87 AGAAUCUU-GAUGAUGCUGCAU AAGCAGCUUCAUCCAAGAUUCU Cleavage Inositol-tetrakisphosphate 1-kinase (AHRD V3.3 *** K4BJF8_SOLLC) 1 sly-miR172b Solyc02g023950.3.1 3.0 14.313 1 21 3928 3948 AGAAUCUUGAUGAUGCUGCAU CUGAGGCAUCAUCAACAUUCU Cleavage Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** AT4G20940.1) 1 sly-miR172b Solyc03g121590.3.1 3.0 21.133 1 21 1970 1991 AGAAUCUUGAUGAU-GCUGCAU GUUCAGCCAUGAUCAAGAUUCU Cleavage Protein ROOT HAIR DEFECTIVE 3 homolog (AHRD V3.3 *** K4BMV8_SOLLC) 1 sly-miR1916 Solyc03g079930.3.1 3.0 16.725 1 20 575 594 AUUUCACUUAGACACCUCAA UUAGGGUGUCUAAGAGAAAU Cleavage Mitochondrial glycoprotein (AHRD V3.3 *** A0A103YDB4_CYNCS) 1 sly-miR1916 Solyc03g124010.3.1 3.0 22.723 1 20 7135 7155 AUUUCACUUAG-ACACCUCAA UUGAGGUGUGCAAGGUGGAAU Translation P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative (AHRD V3.3 *** A0A061GGV8_THECC) 1 sly-miR1916 Solyc01g095680.2.1 3.0 15.618 1 20 918 939 AUUUCACUUA-GAC-ACCUCAA UUGAUGUUGUCGUAAGUGAAAU Translation Ubiquitin carboxyl-terminal hydrolase family protein (AHRD V3.3 *-* A0A061DSR6_THECC) 1 sly-miR1916 Solyc02g070490.3.1 3.0 17.48 1 20 1473 1492 AUUUCACUUAGACACCUCAA AUGAGGCAUCUAAGUGAAAU Cleavage Alpha/beta hydrolase, putative (AHRD V3.3 *** B9RYL3_RICCO) 1 sly-miR1916 Solyc01g099980.3.1 3.0 14.384 1 20 515 534 AUUUCACUUAGACACCUCAA AUGAGAAGUCUAAGUGAAAU Cleavage enolase (DUF1399) (AHRD V3.3 *** AT1G56230.1) 1 sly-miR1916 Solyc07g055740.1.1 3.0 13.329 1 20 967 986 AUUUCACUUAGACACCUCAA UUAAGGUCUAUAAGUGAAAU Translation strictosidine synthase 1 sly-miR1917 Solyc12g035555.1.1 3.0 8.429 1 21 2395 2415 AUUAAUAAAGAGUGCUAAAGU AUUUUGGGGCUUUUUAUUAAU Cleavage myosin XI D (AHRD V3.3 --* AT2G33240.8) 1 sly-miR1917 Solyc10g055750.1.1 3.0 15.183 1 21 795 816 AUUAAUAAAGAGUG-CUAAAGU ACUUUGGACACUCUCUAUUAGU Cleavage Lysine/histidine transporter (AHRD V3.3 *** J9PGS6_PHYAN) 1 sly-miR1917 Solyc01g066450.3.1 3.0 15.78 1 21 199 219 AUUAAUAAAGAGUGCUAAAGU CCUUUAGUCCUCUUUAUUCAU Cleavage Epoxide hydrolase (AHRD V3.3 *** A0A072UTA2_MEDTR) 1 sly-miR1917 Solyc10g038130.2.1 3.0 11.906 1 21 241 261 AUUAAUAAAGAGUGCUAAAGU UUUUUAGUAUUGUUUGUUAAU Translation Pectinacetylesterase family protein (AHRD V3.3 *** AT2G46930.1) 1 sly-miR1917 Solyc01g100370.3.1 3.0 11.192 1 21 5680 5701 AUUAAUAAA-GAGUGCUAAAGU UUUUUGGCCCUCGUUUAUUAAU Translation Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** AT3G62550.1) 1 sly-miR1917 Solyc05g024415.1.1 3.0 14.599 1 21 1078 1098 AUUAAUAAAGAGUGCUAAAGU UCUUCAGUACUGUUUAUUGAU Translation Galactose oxidase/kelch repeat protein (AHRD V3.3 *** G7IH11_MEDTR) 1 sly-miR1917 Solyc03g044210.3.1 3.0 11.337 1 21 3031 3051 AUUAAUAAAGAGUGCUAAAGU UCUUUAGUUUUAUUUAUUAAU Translation Vicilin-like protein (AHRD V3.3 *** A0A0S3B0K0_COCNU) 1 sly-miR1917 Solyc07g044790.3.1 3.0 13.095 1 21 3882 3902 AUUAAUAAAGAGUGCUAAAGU CCUAUAGCGCUGUUUAUUGAU Translation Pvr4 (AHRD V3.3 *-* A0A1D5AHY8_CAPAN) 1 sly-miR1918 Solyc03g043900.1.1 3.0 20.131 1 22 119 141 UGUUGGUGAGAGU-UCGAUUCUC UAGAAUUGGUAUUUUCACCAACA Cleavage Basic-leucine zipper (BZIP) transcription factor family (AHRD V3.3 *-* A0A0K9NZH2_ZOSMR) 1 sly-miR1918 Solyc01g044520.2.1 3.0 23.018 1 22 987 1008 UGUUGGUGAGAGUUCGAUUCUC GAAAAUUAAACUCUCAUCAACA Cleavage LOB domain-containing protein, putative (AHRD V3.3 *** B9SK21_RICCO) 1 sly-miR1918 Solyc08g076685.1.1 3.0 5.62 1 22 438 461 UGUUGGUGAG-AGUUCGA-UUCUC UAGAAGUCGAAUUGCUUACCAACA Translation homeobox-leucine zipper protein ATHB-8 (AHRD V3.3 --* AT4G32880.1) 1 sly-miR1918 Solyc08g077840.3.1 3.0 24.225 1 22 893 915 UGUUGGUGAGAG-UUCGAUUCUC GGGAAGUGAAGUUCUCACCAACA Cleavage ureidoglycine aminohydrolase (AHRD V3.3 *** AT4G17050.1) 1 sly-miR1918 Solyc01g105180.3.1 3.0 17.409 1 22 1914 1936 UGUUGGUGAGAGUUCGAUU-CUC GGGCAAUUGAACCCUCAUCAACA Translation Protein DA1-related 1 (AHRD V3.3 *** A0A199UXH9_ANACO) 1 sly-miR1918 Solyc03g059505.1.1 3.0 13.91 1 22 211 233 UGUUGGUGAGAGUUCGAUU-CUC CAGCAGUUGCACUCUCACCAACA Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TIQ1_CAJCA) 1 sly-miR1918 Solyc08g061935.1.1 3.0 22.358 1 22 162 184 UGUUGGUGAGAG-UUCGAUUCUC UGGAGUUGAAGCUCUCACCAAUG Cleavage Transposon Ty3-I Gag-Pol polyprotein (AHRD V3.3 *** A0A151R2L8_CAJCA) 1 sly-miR1918 Solyc02g067710.2.1 3.0 10.815 1 22 1189 1211 UGUUGGUG-AGAGUUCGAUUCUC AGGAAUUGAAUUCUUCAUCAACG Cleavage ARM repeat superfamily protein (AHRD V3.3 *** AT5G14790.1) 1 sly-miR1918 Solyc04g064570.3.1 3.0 20.717 1 22 4711 4732 UGUUGGUGAGAGUUCGAUUCUC GGGAAUCGAUCCCUCACUAAUA Translation Ribosome maturation SBDS (AHRD V3.3 *** A0A0B0ME10_GOSAR) 1 sly-miR1918 Solyc09g066500.3.1 3.0 15.738 1 22 272 293 UGUUGGUGAGAGUUCGAUUCUC GGUAAGUGAAUUCUCACCAACA Cleavage chromatin remodeling 8 (AHRD V3.3 *** AT2G18760.7) 1 sly-miR1918 Solyc09g075510.3.1 3.0 12.307 1 22 1571 1593 UGUUGGUGAGAGUUCG-AUUCUC GCGAAUGUGAGCUCUCGUCAACA Cleavage Dehydration-induced 19-like protein (AHRD V3.3 *** E3T7S4_GOSHI) 1 sly-miR1918 Solyc04g077260.3.1 3.0 11.221 1 22 95 116 UGUUGGUGAGAGUUCGAUUCUC AGGAAUCAAACUCUCAGCAAUA Cleavage blind-like3 1 sly-miR319a Solyc11g007960.2.1 3.0 14.162 1 20 1464 1483 CUUGGACUGAAGGGAGCUCC GGAGCUUCAGUCAGUUCAAG Translation Acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A151T0U9_CAJCA) 1 sly-miR319b Solyc03g113840.2.1 3.0 19.244 1 21 75 95 UUGGACUGAAGGGAGCUCCCU UGGGAGAUUUCUUCAGUCCAU Cleavage Bax inhibitor 1 (AHRD V3.3 *-* A0A0B2RP92_GLYSO) 1 sly-miR319b Solyc05g006830.3.1 3.0 17.957 1 21 1934 1954 UUGGACUGAAGGGAGCUCCCU UGUGAGUUCCCUUCCGUCCAA Cleavage Thioredoxin family protein (AHRD V3.3 *** B9IJS4_POPTR) 1 sly-miR319b Solyc08g014020.3.1 3.0 16.773 1 21 513 533 UUGGACUGAAGGGAGCUCCCU GGGGUGCUCCCUUAAGUUUAA Cleavage ER protein carbohydrate-binding protein (AHRD V3.3 --* AT1G24485.1) 1 sly-miR319c-3p Solyc11g007960.2.1 3.0 13.682 1 21 1462 1482 UUGGACUGAAGGGAGCUCCUU AAGGAGCUUCAGUCAGUUCAA Translation Acyl-CoA-binding domain-containing protein 4 (AHRD V3.3 *** A0A151T0U9_CAJCA) 1 sly-miR319c-3p Solyc01g094460.3.1 3.0 17.615 1 21 2439 2460 UUGGACUG-AAGGGAGCUCCUU UAGGAGUUCUCUUGCAGUUUAA Cleavage AT hook motif DNA-binding family protein (AHRD V3.3 *** A0A072TNY7_MEDTR) 1 sly-miR319c-3p Solyc07g062680.2.1 3.0 11.86 1 21 1197 1217 UUGGACUGAAGGGAGCUCCUU GAGGGGACCCCUUCAGUCCAG Cleavage lanceolate 1 sly-miR319c-3p Solyc12g014140.2.1 3.0 13.801 1 21 1050 1070 UUGGACUGAAGGGAGCUCCUU GAGGGGACCCCUUCAGUCCAG Cleavage SlTCP3 1 sly-miR319c-3p Solyc08g069010.3.1 3.0 18.318 1 21 1092 1112 UUGGACUGAAGGGAGCUCCUU CAGGAUCUCAUUUCAGUUCAA Cleavage Pentatricopeptide repeat-containing protein, putative (AHRD V3.3 *** B9RNM2_RICCO) 1 sly-miR319c-5p Solyc06g051760.3.1 3.0 21.251 1 21 2019 2039 AGAGCUUCCUUCAGCCCACUC GAUUGGGUUGAAGGAAGUUCG Cleavage Arginyl-tRNA--protein transferase (AHRD V3.3 *** K4C5W5_SOLLC) 1 sly-miR319c-5p Solyc02g079260.2.1 3.0 16.551 1 21 3886 3907 AGAGCUUC-CUUCAGCCCACUC GAGUGAGCUGAAGUGAAGCUCA Cleavage Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103YG02_CYNCS) 1 sly-miR319c-5p Solyc08g008660.3.1 3.0 11.391 1 21 372 392 AGAGCUUCCUUCAGCCCACUC UGGUGGUUUGAAGGGAGCUUU Cleavage NAC domain-containing protein, putative (AHRD V3.3 *** A0A061G3T7_THECC) 1 sly-miR319c-5p Solyc07g005030.3.1 3.0 18.563 1 21 6499 6520 AGAGCUUCCUUCAGCC-CACUC UAGUGAGGUUGAGUGAAGCUCU Translation Dicer-like 4 1 sly-miR319c-5p Solyc03g082840.3.1 3.0 24.272 1 21 346 366 AGAGCUUCCUUCAGCCCACUC UACUGGACUGAAGGGGGCUCU Cleavage Dof zinc finger protein (AHRD V3.3 *** A0A068PXR9_TOBAC) 1 sly-miR319c-5p Solyc12g010115.1.1 3.0 17.136 1 21 40 60 AGAGCUUCCUUCAGCCCACUC CAAUGGACUGAAGCAAGCUCU Cleavage Cathechol O-methyltransferase (AHRD V3.3 -** B0ZR84_PINSY) 1 sly-miR390a-3p Solyc08g066500.3.1 3.0 20.356 1 21 920 940 CGCUAUCCAUCCUGAGUUUUA ACAAAUUUGGGAUGGAUAGUG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H964_ZINVI) 1 sly-miR390a-3p Solyc08g066810.3.1 3.0 12.559 1 21 262 282 CGCUAUCCAUCCUGAGUUUUA ACAAAUUCAAGAUGGAUAGUG Cleavage Glycosyl hydrolase family 5 protein (AHRD V3.3 *** D7KPG3_ARALL) 1 sly-miR390a-3p Solyc01g086640.2.1 3.0 16.859 1 21 1033 1053 CGCUAUCCAUCCUGAGUUUUA GAAAGCUUAGGAGGGAUGGUG Translation LOW QUALITY:O-fucosyltransferase family protein (AHRD V3.3 *** AT2G44500.1) 1 sly-miR390a-5p Solyc10g005110.3.1 3.0 16.154 1 21 480 501 AAGC-UCAGGAGGGAUAGCACC GGUGUUAUGCCUCCUGAAGCUU Cleavage Coproporphyrinogen III oxidase (AHRD V3.3 *** AT1G03475.1) 1 sly-miR390a-5p Solyc07g056410.3.1 3.0 19.518 1 21 5141 5161 AAGCUCAGGAGGGAUAGCACC GGUGCAAUUCCUCCUGAGAUU Cleavage Non-specific serine/threonine protein kinase (AHRD V3.3 *** K4CGH4_SOLLC) 1 sly-miR390a-5p Solyc09g091900.3.1 3.0 18.116 1 21 575 596 AAGCUCAGGAGGGAUAGC-ACC UGUCGCUAUCCUUCCUCAGCUU Cleavage ER lumen protein-retaining receptor (AHRD V3.3 *** K4CWL6_SOLLC) 1 sly-miR390a-5p Solyc04g015600.3.1 3.0 12.104 1 21 1577 1597 AAGCUCAGGAGGGAUAGCACC GGAACUAUUCCUCCUGAGUUU Cleavage LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072U3C5_MEDTR) 1 sly-miR390a-5p Solyc06g036720.3.1 3.0 20.054 1 21 3504 3524 AAGCUCAGGAGGGAUAGCACC GGUGCUAUGCUACUUGAGCUU Translation Ubiquitin family protein (AHRD V3.3 *** B9N6Y0_POPTR) 1 sly-miR390a-5p Solyc01g011040.3.1 3.0 16.235 1 21 779 799 AAGCUCAGGAGGGAUAGCACC CUUGCUAAUCUUCCUGAGCUU Cleavage leucine-rich repeat (LRR) family protein 1 sly-miR390a-5p Solyc05g044615.1.1 3.0 24.575 1 21 2950 2970 AAGCUCAGGAGGGAUAGCACC AGUGCUAUUGCUCUUGGGUUU Cleavage transducin family protein / WD-40 repeat family protein (AHRD V3.3 *** AT4G00800.1) 1 sly-miR390b-3p Solyc08g080050.3.1 3.0 16.946 1 21 621 641 CGCUAUCCAUCCUGAGUUUCA UGAAACUUAAGAUGGAUGGCA Cleavage PGRL1A transmembrane protein (AHRD V3.3 *** A0A0F7GZP2_9ROSI) 1 sly-miR390b-3p Solyc08g066500.3.1 3.0 20.356 1 21 920 940 CGCUAUCCAUCCUGAGUUUCA ACAAAUUUGGGAUGGAUAGUG Cleavage Homeobox leucine-zipper protein (AHRD V3.3 *** Q8H964_ZINVI) 1 sly-miR390b-3p Solyc03g005670.3.1 3.0 18.246 1 21 86 108 CGCUAUCC-AUCCUG-AGUUUCA AGAAACUGCAGGAUUGGAUAGCU Cleavage Disease resistance protein (CC-NBS-LRR class) family protein (AHRD V3.3 *** G7IID2_MEDTR) 1 sly-miR390b-3p Solyc08g066810.3.1 3.0 12.559 1 21 262 282 CGCUAUCCAUCCUGAGUUUCA ACAAAUUCAAGAUGGAUAGUG Cleavage Glycosyl hydrolase family 5 protein (AHRD V3.3 *** D7KPG3_ARALL) 1 sly-miR390b-3p Solyc10g083610.2.1 3.0 21.501 1 21 2434 2455 CGCUAUCCA-UCCUGAGUUUCA CGGAACUCCGGAAUGGAUGGCG Translation ethylene-inducible CTR1-like protein kinase 1 sly-miR390b-5p Solyc01g091230.3.1 3.0 16.127 1 21 538 558 AAGCUCAGGAGGGAUAGCGCC GGUGUUAUUCCUCCUGAGGUU Cleavage Receptor-like kinase (AHRD V3.3 *** A0A191UPW4_CASSA) 1 sly-miR390b-5p Solyc09g091900.3.1 3.0 18.116 1 21 576 596 AAGCUCAGGAGGGAUAGCGCC GUCGCUAUCCUUCCUCAGCUU Cleavage ER lumen protein-retaining receptor (AHRD V3.3 *** K4CWL6_SOLLC) 1 sly-miR390b-5p Solyc09g091850.3.1 3.0 19.674 1 21 796 816 AAGCUCAGGAGGGAUAGCGCC GGCGCUAUUCCUCAUGAUCUU Cleavage Non-lysosomal glucosylceramidase (AHRD V3.3 *** K4CWL1_SOLLC) 1 sly-miR390b-5p Solyc04g015600.3.1 3.0 12.104 1 21 1577 1597 AAGCUCAGGAGGGAUAGCGCC GGAACUAUUCCUCCUGAGUUU Cleavage LRR receptor-like kinase family protein (AHRD V3.3 *** A0A072U3C5_MEDTR) 1 sly-miR394-3p Solyc00g318830.2.1 3.0 10.341 1 20 1024 1046 AGGUGGGCAUACUG--UCAA-CA UGCUUGAAACAGUAUGCCCACCU Cleavage XH/XS domain-containing family protein (AHRD V3.3 *-* B9HTH7_POPTR) 1 sly-miR394-3p Solyc02g084360.3.1 3.0 17.072 1 20 423 443 AGGUGGGCAUA-CUGUCAACA UUUUGAUGGAUAUGCCCACCU Translation V-type proton ATPase proteolipid subunit (AHRD V3.3 *-* A0A0D3DHQ4_BRAOL) 1 sly-miR394-3p Solyc10g006050.3.1 3.0 23.063 1 20 342 363 AGGUGGGCAUACUG-UC-AACA UGUUUGAUCAGUAUUCCCACCU Cleavage RNA-binding protein, putative (AHRD V3.3 *** Q1ENZ5_MUSAC) 1 sly-miR394-5p Solyc12g009100.2.1 3.0 16.617 1 20 1093 1112 UUGGCAUUCUGUCCACCUCC GGAGCUGGAAAGGAUGUCAA Translation FRIGIDA interacting protein 1 (AHRD V3.3 *** AT2G06005.1) 1 sly-miR394-5p Solyc06g048683.1.1 3.0 21.022 1 20 481 500 UUGGCAUUCUGUCCACCUCC GAAGGAGGACAGAAUGCUAG Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TG49_CAJCA) 1 sly-miR394-5p Solyc07g041217.1.1 3.0 17.874 1 20 463 482 UUGGCAUUCUGUCCACCUCC GAAGGAGGACAGAAUGCUAG Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TG49_CAJCA) 1 sly-miR394-5p Solyc05g014760.3.1 3.0 15.211 1 20 1041 1060 UUGGCAUUCUGUCCACCUCC GGAAGUGAAUAGAAUGUCAA Cleavage Kinase family protein (AHRD V3.3 *** B9HTA6_POPTR) 1 sly-miR395a Solyc03g005260.3.1 3.0 16.384 1 22 1266 1287 CUGAAGUGUUUGGGGGAACUCC UGAGUUCCUCCAAACUCUUCAU Cleavage ATP-sulfurylase (AHRD V3.3 *** Q1W2K0_CAMSI) 1 sly-miR395a Solyc09g082860.3.1 3.0 22.654 1 22 381 402 CUGAAGUGUUUGGGGGAACUCC CGAGUUCCUCCAAACUCUUCAU Cleavage ATP-sulfurylase (AHRD V3.3 *** Q1W2K0_CAMSI) 1 sly-miR395a Solyc02g080050.2.1 3.0 9.393 1 22 8250 8272 CUGAAGUGUUUGG-GGGAACUCC UGAGUUCUCUCCAAAUACUUCAU Cleavage Cysteine-rich receptor-like protein kinase 25 (AHRD V3.3 *-* A0A199VX87_ANACO) 1 sly-miR395a Solyc06g008450.3.1 3.0 15.918 1 22 5832 5853 CUGAAGUGUUUGGGGGAACUCC UGAGUUCUCUCAAUCACUUCAU Translation Mi1.6 1 sly-miR395a Solyc06g075970.3.1 3.0 5.802 1 22 978 999 CUGAAGUGUUUGGGGGAACUCC AAUGUUCUUCCAAACACUUCAA Cleavage P-hydroxybenzoic acid efflux pump subunit aaeB (AHRD V3.3 *** A0A061GW63_THECC) 1 sly-miR395a Solyc01g068450.3.1 3.0 16.865 1 22 2958 2979 CUGAAGUGUUUGGGGGAACUCC GUAGUGCCCUCAGACACUUCAA Cleavage Essential protein Yae1, N-terminal (AHRD V3.3 *** A0A118K080_CYNCS) 1 sly-miR395a Solyc06g082560.2.1 3.0 18.646 1 22 250 271 CUGAAGUGUUUGGGGGAACUCC CAAGUUCCACCAAGUACUUCAC Cleavage Chaperone protein (AHRD V3.3 *** W9RSC3_9ROSA) 1 sly-miR395b Solyc03g005260.3.1 3.0 16.384 1 22 1266 1287 CUGAAGUGUUUGGGGGAACUCC UGAGUUCCUCCAAACUCUUCAU Cleavage ATP-sulfurylase (AHRD V3.3 *** Q1W2K0_CAMSI) 1 sly-miR395b Solyc09g082860.3.1 3.0 22.654 1 22 381 402 CUGAAGUGUUUGGGGGAACUCC CGAGUUCCUCCAAACUCUUCAU Cleavage ATP-sulfurylase (AHRD V3.3 *** Q1W2K0_CAMSI) 1 sly-miR395b Solyc02g080050.2.1 3.0 9.393 1 22 8250 8272 CUGAAGUGUUUGG-GGGAACUCC UGAGUUCUCUCCAAAUACUUCAU Cleavage Cysteine-rich receptor-like protein kinase 25 (AHRD V3.3 *-* A0A199VX87_ANACO) 1 sly-miR395b Solyc06g008450.3.1 3.0 15.918 1 22 5832 5853 CUGAAGUGUUUGGGGGAACUCC UGAGUUCUCUCAAUCACUUCAU Translation Mi1.6 1 sly-miR395b Solyc06g075970.3.1 3.0 5.802 1 22 978 999 CUGAAGUGUUUGGGGGAACUCC AAUGUUCUUCCAAACACUUCAA Cleavage P-hydroxybenzoic acid efflux pump subunit aaeB (AHRD V3.3 *** A0A061GW63_THECC) 1 sly-miR395b Solyc01g068450.3.1 3.0 16.865 1 22 2958 2979 CUGAAGUGUUUGGGGGAACUCC GUAGUGCCCUCAGACACUUCAA Cleavage Essential protein Yae1, N-terminal (AHRD V3.3 *** A0A118K080_CYNCS) 1 sly-miR395b Solyc06g082560.2.1 3.0 18.646 1 22 250 271 CUGAAGUGUUUGGGGGAACUCC CAAGUUCCACCAAGUACUUCAC Cleavage Chaperone protein (AHRD V3.3 *** W9RSC3_9ROSA) 1 sly-miR396a-3p Solyc02g081420.3.1 3.0 12.063 1 21 2061 2082 GUUCAAUAAAGCUG-UGGGAAG CUUCCUAACAGCUUUUUUGAAC Cleavage P-loop containing nucleoside triphosphate hydrolases superfamily protein, putative (AHRD V3.3 *** A0A061EY56_THECC) 1 sly-miR396a-5p Solyc09g090710.3.1 3.0 17.039 1 21 5782 5804 UUCCACAGCUUUCU--UGAACUG AAGUUCAUGAGGAAGCUGUGGGA Cleavage pfkB-like carbohydrate kinase family protein (AHRD V3.3 --* AT5G43910.2) 1 sly-miR396a-5p Solyc03g045080.2.1 3.0 17.861 1 21 419 439 UUCCACAGCUUUCUUGAACUG CAGUUUCAGGAGGUUGUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 --* AT4G08850.2) 1 sly-miR396a-5p Solyc04g054840.1.1 3.0 15.498 1 21 408 428 UUCCACAGCUUUCUUGAACUG UAGUUUAAGAGAGUGGUGGAA Cleavage Ethylene insensitive 3 family protein (AHRD V3.3 *** AT5G10120.1),Pfam:PF04873 1 sly-miR396a-5p Solyc08g075160.3.1 3.0 21.857 1 21 970 991 UUCCACAGCU-UUCUUGAACUG CAGUUUCAGAAUGGCUGUGGAA Translation Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A0B2PXS6_GLYSO) 1 sly-miR396a-5p Solyc01g108340.3.1 3.0 19.232 1 21 1168 1189 UUCCACAGCUUUCUUG-AACUG AAGUUUCAAGAAAGCUUUGGAG Cleavage peptidyl-prolyl cis-trans isomerase CYP40-like 1 sly-miR396a-5p Solyc06g007320.3.1 3.0 17.624 1 21 2657 2677 UUCCACAGCUUUCUUGAACUG UAGAUCGAGAAAGCUGUGAAA Cleavage Ubiquitin activating enzyme E1 (AHRD V3.3 *** G1FER0_CAMSI) 1 sly-miR396a-5p Solyc02g023950.3.1 3.0 15.766 1 21 647 667 UUCCACAGCUUUCUUGAACUG GAGUUUAAGAAAGGUGUUGAA Cleavage Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** AT4G20940.1) 1 sly-miR396a-5p Solyc07g063240.3.1 3.0 16.694 1 21 864 885 UUCCACAGCUUUCUUGA-ACUG AGGUGUCAAGAAAUCUGUGGAG Translation Protein silencing defective protein (AHRD V3.3 *** G7IPR8_MEDTR) 1 sly-miR396a-5p Solyc06g073210.3.1 3.0 15.312 1 21 1392 1413 UUCCACAGCUUUCUUGA-ACUG UAGUCUCAUGAAAGAUGUGGAA Cleavage Far-red impaired responsive (FAR1) family protein (AHRD V3.3 *** AT3G59470.2) 1 sly-miR396a-5p Solyc06g007820.1.1 3.0 12.092 1 21 49 69 UUCCACAGCUUUCUUGAACUG AAGGUUAAGGAUGCUGUGGAA Translation Pentatricopeptide repeat protein (AHRD V3.3 *-* A0A1B3IPW0_CAPAN) 1 sly-miR396a-5p Solyc11g013260.2.1 3.0 20.23 1 21 601 621 UUCCACAGCUUUCUUGAACUG GAGUUUUCGAAAGCUGUGGAG Cleavage Prohibitin (AHRD V3.3 *** O04361_TOBAC) 1 sly-miR396b Solyc09g090710.3.1 3.0 17.039 1 21 5782 5804 UUCCACAGCUUUCU--UGAACUU AAGUUCAUGAGGAAGCUGUGGGA Cleavage pfkB-like carbohydrate kinase family protein (AHRD V3.3 --* AT5G43910.2) 1 sly-miR396b Solyc01g108340.3.1 3.0 19.232 1 21 1168 1189 UUCCACAGCUUUCUUG-AACUU AAGUUUCAAGAAAGCUUUGGAG Cleavage peptidyl-prolyl cis-trans isomerase CYP40-like 1 sly-miR396b Solyc07g056470.3.1 3.0 15.631 1 21 486 507 UUCCACAGCUUUCUUGAA-CUU GGGCUUCAAGGAAGCUGUGGAC Cleavage Glutathione S-transferase-like protein (AHRD V1 **** Q8GVD1_SOLLC) 1 sly-miR396b Solyc07g063240.3.1 3.0 16.694 1 21 864 885 UUCCACAGCUUUCUUGA-ACUU AGGUGUCAAGAAAUCUGUGGAG Translation Protein silencing defective protein (AHRD V3.3 *** G7IPR8_MEDTR) 1 sly-miR396b Solyc04g054840.1.1 3.0 15.498 1 21 408 428 UUCCACAGCUUUCUUGAACUU UAGUUUAAGAGAGUGGUGGAA Cleavage Ethylene insensitive 3 family protein (AHRD V3.3 *** AT5G10120.1),Pfam:PF04873 1 sly-miR396b Solyc06g007820.1.1 3.0 12.092 1 21 49 69 UUCCACAGCUUUCUUGAACUU AAGGUUAAGGAUGCUGUGGAA Translation Pentatricopeptide repeat protein (AHRD V3.3 *-* A0A1B3IPW0_CAPAN) 1 sly-miR396b Solyc11g022540.2.1 3.0 18.864 1 21 483 503 UUCCACAGCUUUCUUGAACUU AAGUUCAAAAGAGAUGUGGAG Cleavage Transmembrane 9 superfamily member (AHRD V3.3 *** K4D7A1_SOLLC) 1 sly-miR396b Solyc02g023950.3.1 3.0 15.766 1 21 647 667 UUCCACAGCUUUCUUGAACUU GAGUUUAAGAAAGGUGUUGAA Cleavage Leucine-rich receptor-like protein kinase family protein (AHRD V3.3 *** AT4G20940.1) 1 sly-miR396b Solyc03g045080.2.1 3.0 17.861 1 21 419 439 UUCCACAGCUUUCUUGAACUU CAGUUUCAGGAGGUUGUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 --* AT4G08850.2) 1 sly-miR396b Solyc06g007320.3.1 3.0 17.624 1 21 2657 2677 UUCCACAGCUUUCUUGAACUU UAGAUCGAGAAAGCUGUGAAA Cleavage Ubiquitin activating enzyme E1 (AHRD V3.3 *** G1FER0_CAMSI) 1 sly-miR396b Solyc11g013260.2.1 3.0 20.23 1 21 601 621 UUCCACAGCUUUCUUGAACUU GAGUUUUCGAAAGCUGUGGAG Cleavage Prohibitin (AHRD V3.3 *** O04361_TOBAC) 1 sly-miR396b Solyc08g075160.3.1 3.0 21.857 1 21 970 991 UUCCACAGCU-UUCUUGAACUU CAGUUUCAGAAUGGCUGUGGAA Translation Bifunctional purine biosynthesis protein PurH (AHRD V3.3 *** A0A0B2PXS6_GLYSO) 1 sly-miR397 Solyc02g085120.3.1 3.0 17.517 1 20 2246 2265 AUUGAGUGCAGCGUUGAUGA UUGUCAAUGCUGCUCUCAAU Cleavage Laccase (AHRD V3.3 *** I1LHT8_SOYBN) 2 sly-miR397 Solyc01g108920.3.1 3.0 15.426 1 20 2661 2680 AUUGAGUGCAGCGUUGAUGA UCAUCAGCGUUGCAUUCAGC Cleavage Sorting nexin-16 (AHRD V3.3 *** W9R163_9ROSA) 1 sly-miR397 Solyc10g076710.2.1 3.0 19.465 1 20 1546 1565 AUUGAGUGCAGCGUUGAUGA UCAUUAAUGUUGCCCUCAAU Cleavage Phosphoinositide phospholipase C (AHRD V3.3 *** A0A067L8K5_JATCU) 1 sly-miR397 Solyc04g055050.1.1 3.0 10.6 1 20 784 804 AUUGAGUGCAG-CGUUGAUGA UCGUCAGCGUCUGCGUUCAAU Translation VQ motif-containing protein (AHRD V3.3 *-* AT4G39720.4) 1 sly-miR397 Solyc09g011970.2.1 3.0 11.117 1 20 1099 1118 AUUGAGUGCAGCGUUGAUGA UGAUCAAUGCUGCACUUAAC Cleavage Laccase (AHRD V3.3 *** A0A0K9RM65_SPIOL) 1 sly-miR397 Solyc06g050530.3.1 3.0 13.856 1 20 751 770 AUUGAGUGCAGCGUUGAUGA UCAUCAACUCUGGACUCAAC Cleavage Laccase (AHRD V3.3 *** I1M7Q3_SOYBN) 1 sly-miR399 Solyc02g088290.3.1 3.0 19.472 1 21 3041 3061 UGCCAAAGGAGAGUUGCCCUA UAGGAUAAUGCUCCUUUGGCA Cleavage Pattern formation protein EMB30 (AHRD V3.3 *** A0A0B2PDV3_GLYSO) 1 sly-miR403-3p Solyc12g098200.2.1 3.0 13.28 1 21 1126 1147 CUAGAUUCAC-GCACAAGCUCG CGAGCUAGUGUUGUGAGUCUAG Translation F-box family protein (AHRD V3.3 *** AT2G02240.1) 1 sly-miR403-5p Solyc04g077330.3.1 3.0 9.125 1 21 2030 2050 CGUUUGUGCGUGAAUCUAACA UGUUAGAUCCACGUACAAAUC Cleavage Serine/threonine-protein kinase (AHRD V3.3 *-* M1A1I5_SOLTU) 1 sly-miR403-5p Solyc06g069020.3.1 3.0 16.977 1 21 985 1006 CGUUUGUGCGUGAAUCU-AACA UGUUCAGAUACACGCAUAAAUG Cleavage Elongation factor 1 alpha (AHRD V3.3 *** A0A1B2LUN9_9CARY) 1 sly-miR4376 Solyc05g016330.3.1 3.0 21.167 1 22 411 432 ACGCAGGAGAGAUGAUGCUGGA AGCAGCAUCACCUGUCUUGUGU Translation Cytochrome P450 (AHRD V3.3 *** W9R369_9ROSA) 1 sly-miR477-3p Solyc10g055060.2.1 3.0 17.927 1 22 1091 1112 AGUUCUUGUAGGGUGAGACAAC CUUGUCUCAACCUGAAAGAGCU Cleavage Nucleotide binding site-leucine rich repeat protein (AHRD V3.3 *** A0A0H5AGV4_SOLPI) 1 sly-miR477-3p Solyc10g055080.2.1 3.0 14.856 1 22 1682 1703 AGUUCUUGUAGGGUGAGACAAC CUUGUCUCAACCUGAAAGAGCU Cleavage CC-NBS-LRR disease resistance protein (AHRD V3.3 *-* V5UP80_CICAR) 1 sly-miR477-3p Solyc06g075970.3.1 3.0 20.026 1 22 1587 1608 AGUUCUUGUAGGGUGAGACAAC UUUGUUACAGCCUACAAGAGCU Cleavage P-hydroxybenzoic acid efflux pump subunit aaeB (AHRD V3.3 *** A0A061GW63_THECC) 1 sly-miR477-3p Solyc03g122100.2.1 3.0 16.841 1 22 1062 1084 AGUUCUUGU-AGGGUGAGACAAC GGUGUCUUACUCUUAGAAGAACU Translation 3-oxoacyl-[acyl-carrier-protein] synthase (AHRD V3.3 *-* A0A072V6B8_MEDTR) 1 sly-miR477-3p Solyc05g013150.3.1 3.0 15.758 1 22 5086 5107 AGUUCUUGUAGGGUGAGACAAC AAUGUCUCAUAUUGCAAGAAUU Cleavage Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic (AHRD V3.3 *** RBCMT_TOBAC) 1 sly-miR477-5p Solyc01g081080.2.1 3.0 14.722 1 21 590 612 UG-UCUCUCCCUCAAGGGC-UCC GGAAGCCUUUGAGGGAGAGAGCA Cleavage Replication factor C subunit, putative (AHRD V3.3 *-* B9T608_RICCO) 1 sly-miR477-5p Solyc11g028100.2.1 3.0 20.606 1 21 1453 1474 UGUCUCUCCCUC-AAGGGCUCC CGAGCCUUUUGAGGGAGAGGCU Cleavage Elongation factor 1-gamma 1 (AHRD V3.3 *** EF1G1_ORYSJ) 1 sly-miR477-5p Solyc05g012510.3.1 3.0 24.684 1 21 1118 1139 UGUCUCUCCCUCAAG-GGCUCC CGAGUCACUUGAGGGAAAGACA Cleavage Alpha-1,4 glucan phosphorylase (AHRD V3.3 *** K4BXX3_SOLLC) 1 sly-miR477-5p Solyc01g103410.3.1 3.0 22.204 1 21 288 308 UGUCUCUCCCUCAAGGGCUCC AGAGUUAUUGGGGGAGAGGCA Cleavage KH domain-containing protein (AHRD V3.3 *** W9R1Z3_9ROSA) 1 sly-miR477-5p Solyc03g114500.3.1 3.0 17.534 1 21 4487 4508 UGUCUCUCCCUCAAG-GGCUCC UGGGCCACUUGAGAGAGAGAUA Translation Enolase, putative (AHRD V3.3 *** B9RE72_RICCO) 1 sly-miR482a Solyc12g056490.1.1 3.0 23.311 1 22 324 345 UUUCCAAUUCCACCCAUUCCUA UGGGAAUGGGAGGAAUUUGAAG Cleavage WD40 repeat-containing protein (AHRD V3.3 *** A0A103XFY3_CYNCS) 1 sly-miR482a Solyc01g087200.3.1 3.0 19.95 1 22 515 537 UUU-CCAAUUCCACCCAUUCCUA CAGGUAUGGGUGGGAUUGGCAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482a Solyc01g090860.3.1 3.0 8.404 1 22 782 803 UUUCCAAUUCCACCCAUUCCUA UCAGAAUGGGUGGAAUUGGGGU Cleavage Nucleotidyltransferase family protein (AHRD V3.3 *** AT4G00060.4) 1 sly-miR482a Solyc08g005510.2.1 3.0 18.753 1 22 1512 1534 UUU-CCAAUUCCACCCAUUCCUA GGGGAAUAGGUGGAGUUGGUAAA Cleavage disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.1) 1 sly-miR482a Solyc02g091890.2.1 3.0 6.22 1 22 4704 4725 UUUCCAAUUCCACCCAUUCCUA AAGAAGUCGGUGGAAUUGGAAG Cleavage myb-like protein X (AHRD V3.3 *-* AT4G33740.5) 1 sly-miR482a Solyc11g011350.2.1 3.0 19.87 1 22 1381 1402 UUUCCAAUUCCACCCAUUCCUA GGGGAAUAGGUGGAGUUGGUAA Cleavage disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.1) 1 sly-miR482a Solyc10g050115.1.1 3.0 5.699 1 22 891 912 UUUCCAAUUCCACCCAUUCCUA AAUGAAUGGAUGGGAUUGGAAG Cleavage Transposon Ty3-I Gag-Pol polyprotein (AHRD V3.3 *-* A0A151R5M0_CAJCA) 1 sly-miR482a Solyc09g090390.2.1 3.0 18.271 1 22 1709 1730 UUUCCAAUUCCACCCAUUCCUA GAGGAAUCGGUGGCAUUGGAGG Translation 2-oxoglutarate-dependent dioxygenase AOP2 (AHRD V3.3 --* AOP2V_ARATH) 1 sly-miR482a Solyc05g009750.1.1 3.0 17.541 1 22 164 185 UUUCCAAUUCCACCCAUUCCUA UUGGAAUGGCUGGAAUAGGGAA Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC) 1 sly-miR482a Solyc12g009450.2.1 3.0 19.542 1 22 727 748 UUUCCAAUUCCACCCAUUCCUA UUGGGAUGGGUGGCAUUGGUAA Translation Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** AT5G35450.2) 1 sly-miR482a Solyc02g030100.3.1 3.0 17.13 1 22 3745 3767 UUUCCAAUUCCACC-CAUUCCUA UUGAAAUGAGGUGGGGUUGGAAA Cleavage Vacuolar protein sorting-associated protein 54 (AHRD V3.3 *** W9SA63_9ROSA) 1 sly-miR482a Solyc02g030105.1.1 3.0 17.13 1 22 2139 2161 UUUCCAAUUCCACC-CAUUCCUA UUGAAAUGAGGUGGGGUUGGAAA Cleavage Vacuolar protein sorting-associated protein 54 (AHRD V3.3 *** W9SA63_9ROSA) 1 sly-miR482a Solyc03g083130.2.1 3.0 16.198 1 22 1745 1766 UUUCCAAUUCCACCCAUUCCUA GAGCAAUGUUUGGAAUUGGAAA Cleavage gamma-irradiation and mitomycin c induced 1 (AHRD V3.3 *** AT5G24280.3) 1 sly-miR482b Solyc07g005770.2.1 3.0 23.779 1 22 541 562 UCUUGCCUACACCGCCCAUGCC GGUAUGGGCGGUAUAGGCAAAA Translation LOW QUALITY:Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482b Solyc11g069925.1.1 3.0 24.835 1 22 622 643 UCUUGCCUACACCGCCCAUGCC GGAAUGGGCGGUGCGGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A068EUA9_SOLLC) 1 sly-miR482b Solyc11g020100.2.1 3.0 23.736 1 22 1110 1131 UCUUGCCUACACCGCCCAUGCC GGUAUGGGCGGUAUCGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482b Solyc08g005440.3.1 3.0 21.814 1 22 627 648 UCUUGCCUACACCGCCCAUGCC GGCAUGGGUGGUUCAGGUAAGA Translation NBS-LRR disease resistance protein (AHRD V3.3 *** G7IVT3_MEDTR) 1 sly-miR482b Solyc11g020090.1.1 3.0 20.197 1 22 103 124 UCUUGCCUACACCGCCCAUGCC GGUAUGGGCGGUAGAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *-* A0A103XRK3_CYNCS) 1 sly-miR482b Solyc10g051050.2.1 3.0 21.243 1 22 929 950 UCUUGCCUACACCGCCCAUGCC GAUAUGGGCAGUAUAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482c Solyc09g091050.3.1 3.0 15.779 1 22 833 854 UCUUGCCAAUACCGCCCAUUCC GGAAUGGGCGGUGGUGGGAAGA Translation Calcium-dependent lipid-binding (CaLB domain) family protein (AHRD V3.3 *-* AT5G04220.1) 1 sly-miR482c Solyc11g006520.2.1 3.0 23.607 1 22 819 840 UCUUGCCAAUACCGCCCAUUCC GGUAUGGGUGGUAUCGGUAAGA Cleavage Disease resistance protein (AHRD V3.3 *** A0A118JXS4_CYNCS) 1 sly-miR482c Solyc01g014840.3.1 3.0 16.059 1 22 649 670 UCUUGCCAAUACCGCCCAUUCC GGGAUGGGAGGCAUUGGUAAGA Translation disease resistance protein (TIR-NBS-LRR class) (AHRD V3.3 *** AT5G17680.2) 1 sly-miR482c Solyc12g006040.2.1 3.0 20.75 1 22 664 685 UCUUGCCAAUACCGCCCAUUCC GGAAUGGGUGGCAUAGGUAAGA Translation NBS-LRR protein (AHRD V3.3 *** Q9SM52_SOLAC) 1 sly-miR482c Solyc11g069925.1.1 3.0 24.835 1 22 622 643 UCUUGCCAAUACCGCCCAUUCC GGAAUGGGCGGUGCGGGUAAGA Translation Disease resistance protein (AHRD V3.3 *** A0A068EUA9_SOLLC) 1 sly-miR482c Solyc07g027020.3.1 3.0 15.263 1 22 914 936 UCUUG-CCAAUACCGCCCAUUCC UCGAUGGGUGGUAUUGGAUAAGA Cleavage Protein kinase family protein (AHRD V3.3 *-* C6ZRT1_SOYBN) 1 sly-miR482c Solyc01g108460.2.1 3.0 19.975 1 22 5259 5282 UCUUGCCAAUA-CCGCCCAU-UCC UGACAUAGGCGGCUAUUGGCAAGA Translation Carboxypeptidase (AHRD V3.3 *-* K4B361_SOLLC) 1 sly-miR482c Solyc05g032850.3.1 3.0 17.25 1 22 2848 2870 UCUUGCCAA-UACCGCCCAUUCC AAAAUGGGUGAUAAUUGGCAGGA Translation evolutionarily conserved C-terminal region 2 (AHRD V3.3 *** AT3G13460.4) 1 sly-miR482d-3p Solyc02g037540.2.1 3.0 23.811 1 22 479 501 UUU-CCUAUUCCACCCAUGCCAA AUGGCAUGGGUGGGGUGGGUAAA Cleavage Disease resistance protein (AHRD V3.3 *** W9R405_9ROSA) 1 sly-miR482d-3p Solyc09g075010.3.1 3.0 16.92 1 22 611 632 UUUCCUAUUCCACCCAUGCCAA GUGAUAUGGGUGGAAUGGGAGG Cleavage HSP20-like chaperones superfamily protein (AHRD V3.3 *-* AT4G02450.2) 1 sly-miR482d-3p Solyc08g075640.3.1 3.0 24.051 1 22 836 857 UUUCCUAUUCCACCCAUGCCAA UUGGUAUGGGGGGGCUAGGAAA Cleavage NBS-LRR resistance protein (AHRD V3.3 *** B6E013_SOLBU) 1 sly-miR482d-3p Solyc06g062440.3.1 3.0 22.729 1 22 592 614 UUUCCUAUUCCACCCAUGCC-AA UUAGGAAUGGGGGGAAUAGGAAA Cleavage Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR482d-3p Solyc01g102920.3.1 3.0 14.713 1 22 635 656 UUUCCUAUUCCACCCAUGCCAA GUGGUAUUGGUGGAAUUGGAAA Cleavage Disease resistance protein (TIR-NBS-LRR class), putative (AHRD V3.3 *** A0A072U6U6_MEDTR) 1 sly-miR482d-3p Solyc09g098100.3.1 3.0 18.265 1 22 2059 2081 UUUCCUAU-UCCACCCAUGCCAA UAGGCAUGGGUGGACAAGGGAAA Cleavage CC-NBS-LRR_Solyc09g098100 1 sly-miR482d-3p Solyc02g030290.1.1 3.0 19.46 1 22 281 303 UUU-CCUAUUCCACCCAUGCCAA AGGGCAUGGGUGGGCUAGGUAAA Cleavage LOW QUALITY:Nbs-lrr resistance protein, putative (AHRD V3.3 *-* A0A061FET6_THECC) 1 sly-miR482d-5p Solyc07g015860.3.1 3.0 13.86 1 21 245 266 GGAGUGGGUGGGAUGGAAA-AA UUCUUUCCGUUCCAUUCACUCC Cleavage peptide deformylase AF271258 1 sly-miR482d-5p Solyc04g072030.1.1 3.0 21.033 1 21 857 877 GGAGUGGGUGGGAUGGAAAAA UUUUUUCAACUCAUCCACUUC Cleavage Dynamin-related protein (AHRD V3.3 *** A0A1B0UTC3_TOBAC) 1 sly-miR482d-5p Solyc03g019760.3.1 3.0 6.3 1 21 178 198 GGAGUGGGUGGGAUGGAAAAA UUUUUCCCUUCUACCCAUUUC Cleavage ABC transporter G family member (AHRD V3.3 *** A0A0K9NYG1_ZOSMR) 1 sly-miR482d-5p Solyc06g065390.3.1 3.0 2.562 1 21 77 97 GGAGUGGGUGGGAUGGAAAAA CUUUUCUAUCUCACUCAUUUU Cleavage 50S ribosomal protein L21, chloroplastic (AHRD V3.3 *** A0A199W1N6_ANACO) 1 sly-miR482d-5p Solyc01g111880.3.1 3.0 9.169 1 21 292 312 GGAGUGGGUGGGAUGGAAAAA AUUUUUCAUCUCAUUCACUUU Cleavage MAP kinase kinase kinase 11 1 sly-miR482d-5p Solyc03g117580.3.1 3.0 9.511 1 21 4860 4880 GGAGUGGGUGGGAUGGAAAAA CCUUCCCAUCCCAUCCACUCU Cleavage GAG1At protein (AHRD V3.3 *** AT1G16000.1) 1 sly-miR482d-5p Solyc02g090010.2.1 3.0 10.595 1 21 97 117 GGAGUGGGUGGGAUGGAAAAA CUUUUCAAUUUUGCCCACUCC Cleavage Molybdopterin synthase sulfur carrier subunit (AHRD V3.3 *** M1AMG8_SOLTU) 1 sly-miR482d-5p Solyc10g085510.2.1 3.0 10.532 1 21 1401 1421 GGAGUGGGUGGGAUGGAAAAA CUUUUCCAUUUCUCUCACUUC Translation Ubiquitin-conjugating enzyme family protein (AHRD V3.3 --* AT1G45050.1) 1 sly-miR482d-5p Solyc10g081260.2.1 3.0 14.466 1 21 646 666 GGAGUGGGUGGGAUGGAAAAA GUUUUUCGUCUUAGCCACUCC Cleavage Protein DETOXIFICATION (AHRD V3.3 *** K4D313_SOLLC) 1 sly-miR482d-5p Solyc05g056320.3.1 3.0 11.223 1 21 1138 1158 GGAGUGGGUGGGAUGGAAAAA CUUAUCCGUUCCGCCCACUUC Cleavage smr (Small MutS Related) domain-containing protein (AHRD V3.3 *** AT5G23520.2) 1 sly-miR482d-5p Solyc12g100300.2.1 3.0 7.308 1 21 2097 2117 GGAGUGGGUGGGAUGGAAAAA CUUUUCUUUCUCACCCAUUUC Cleavage Metal tolerance protein (AHRD V3.3 *** D7RJ71_CARPA) 1 sly-miR482d-5p Solyc03g046490.2.1 3.0 12.368 1 21 39 60 GGAGUGGGUGGGAU-GGAAAAA CUUUUCCGAUAUCACCCACUUC Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TCY2_CAJCA) 1 sly-miR482e-3p Solyc11g065780.2.1 3.0 21.191 1 22 786 807 UCUUUCCUACUCCUCCCAUACC GGUAUGGGGGGUGUAGGUAAGA Translation Disease resistance protein (AHRD V3.3 *-* A0A068EX84_SOLHA) 1 sly-miR482e-3p Solyc11g011560.2.1 3.0 19.304 1 22 1085 1106 UCUUUCCUACUCCUCCCAUACC GUUGUGGGAUGAGUAGGCAAGA Cleavage PHD finger protein family (AHRD V3.3 *** A0A151RBP6_CAJCA) 1 sly-miR482e-3p Solyc06g076350.3.1 3.0 15.598 1 22 392 413 UCUUUCCUACUCCUCCCAUACC GCUAUGAGAGGAGUAGAGAAGA Cleavage LePCL1 1 sly-miR482e-3p Solyc02g078280.3.1 3.0 11.484 1 22 1597 1619 UCUUUCCUACUCCUCC-CAUACC AAUAUGAGGAGGAAAAGGAAAGA Translation DNA ligase-like protein (AHRD V3.3 *** AT2G33793.2) 1 sly-miR482e-5p Solyc01g007260.3.1 3.0 9.463 1 21 235 255 UGUGGGUGGGGUGGAAAGAUU AAUUUUUUUACCUCAUCUACA Cleavage Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein (AHRD V3.3 *** A0A061ETP2_THECC) 1 sly-miR482e-5p Solyc03g119320.1.1 3.0 3.198 1 21 275 296 UGUGGGUGGGGUGGAA-AGAUU AAUCUCUUCCACCCCUUCCACA Cleavage LOW QUALITY:membrane-associated kinase regulator (AHRD V3.3 *** AT1G67050.1) 1 sly-miR482e-5p Solyc10g012145.1.1 3.0 18.626 1 21 450 471 UGUGGGUG-GGGUGGAAAGAUU GAUUUUUCCAUUCGCACCUACA Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151TAT1_CAJCA) 1 sly-miR482e-5p Solyc01g094710.2.1 3.0 17.629 1 21 154 176 UGUGGGUG-GGGUG-GAAAGAUU GAUCUUUCACACCUUCAUCCACA Cleavage LOW QUALITY:mitogen-activated protein kinase kinase kinase 6 (AHRD V3.3 --* AT3G07980.3) 1 sly-miR482e-5p Solyc08g042063.1.1 3.0 7.715 1 21 8 28 UGUGGGUGGGGUGGAAAGAUU AAUCUUUCCACCGAGCUCACA Translation Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A151TCY2_CAJCA) 1 sly-miR482e-5p Solyc01g057685.1.1 3.0 16.821 1 21 1252 1273 UGUGGGUGGGGUGGAAA-GAUU GAUGGUUUCCACCCCAUCCACG Cleavage SKP1-like 8 (AHRD V3.3 --* AT3G21830.1) 1 sly-miR482e-5p Solyc02g014325.1.1 3.0 13.979 1 21 1735 1756 UGUGGGUGGGGUGGAAA-GAUU GAUGGUUUCCACCCCAUCCACG Cleavage Nucleic acid-binding, OB-fold (AHRD V3.3 *-* A0A103XXH6_CYNCS) 1 sly-miR482e-5p Solyc05g018325.1.1 3.0 10.603 1 21 26 46 UGUGGGUGGGGUGGAAAGAUU CAUUUUGUCACUCCGCCCACA Cleavage phosphatidic acid phosphatase 1 (AHRD V3.3 --* AT2G01180.8) 1 sly-miR482e-5p Solyc05g018320.3.1 3.0 10.556 1 21 193 213 UGUGGGUGGGGUGGAAAGAUU CAUUUUGUCACUCCGCCCACA Cleavage arabinogalactan 1 sly-miR482e-5p Solyc03g117050.3.1 3.0 2.942 1 21 980 1000 UGUGGGUGGGGUGGAAAGAUU UAUCUUUCAAUUCUAUCCACA Cleavage NOD26-like intrinsic protein 6.1 1 sly-miR5300 Solyc05g008650.1.1 3.0 20.456 1 22 1282 1303 UCCCCAGUCCAGGCAUUCCAAC GUUGGAAUGCCUGGACUUGGCA Cleavage LOW QUALITY:Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR5300 Solyc05g008520.3.1 3.0 19.354 1 22 1519 1541 UCCCCAGUCC-AGGCAUUCCAAC GUUGGAAUGCUUUGGACUGGAGA Translation Protein DETOXIFICATION (AHRD V3.3 *** K4BX25_SOLLC) 1 sly-miR5300 Solyc09g018220.2.1 3.0 24.547 1 22 551 572 UCCCCAGUCCAGGCAUUCCAAC GUUGGCAUGCCCGGUCUGGGGA Translation Tobacco mosaic virus resistance-2 1 sly-miR5300 Solyc06g064780.1.1 3.0 17.718 1 22 175 196 UCCCCAGUCCAGGCAUUCCAAC UAUGGAAUGCCUGGACUUGGUA Cleavage LOW QUALITY:NBS-coding resistance gene analog (AHRD V3.3 *-* B3V824_TOBAC) 1 sly-miR5300 Solyc06g064690.1.1 3.0 19.557 1 22 49 70 UCCCCAGUCCAGGCAUUCCAAC UAUGGAAUGCCUGGACUUGGUA Cleavage NBS-coding resistance gene analog (AHRD V3.3 *** B3V819_TOBAC) 1 sly-miR5300 Solyc06g064760.1.1 3.0 19.193 1 22 175 196 UCCCCAGUCCAGGCAUUCCAAC UAUGGAAUGCCUGGACUCGGUA Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9R1_SOLLC) 1 sly-miR5300 Solyc02g062110.3.1 3.0 15.93 1 22 1319 1340 UCCCCAGUCCAGGCAUUCCAAC ACUGCAUUGCUUGGAUUGGGGA Cleavage Ferredoxin--NADP reductase (AHRD V3.3 *-* K4B6A3_SOLLC) 2 sly-miR5300 Solyc02g062110.3.1 3.0 18.243 1 22 1445 1466 UCCCCAGUCCAGGCAUUCCAAC ACUGCAUUGCUUGGAUUGGGGA Cleavage Ferredoxin--NADP reductase (AHRD V3.3 *-* K4B6A3_SOLLC) 2 sly-miR5302a Solyc11g012720.2.1 3.0 11.25 1 21 901 922 AAACGAGGUUUGUUACUU-UGG UCAGAAGUAACAAGUCUCGUUA Cleavage Trihelix transcription factor GT-2 (AHRD V3.3 *** A0A0B2S925_GLYSO) 1 sly-miR5302a Solyc11g022380.2.1 3.0 13.084 1 21 145 166 AAACGAGGUUUG-UUACUUUGG UUGAAGUAAUCGAACCUUGUUU Cleavage Phosphoinositide phosphatase family protein (AHRD V3.3 *** AT1G22620.1) 1 sly-miR5302a Solyc04g051397.1.1 3.0 11.081 1 21 503 524 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation HAT family dimerisation domain containing protein (AHRD V3.3 *-* Q2R194_ORYSJ) 1 sly-miR5302a Solyc03g058405.1.1 3.0 10.535 1 21 143 164 AAACGAGG-UUUGUUACUUUGG UGAAAGUAGCAAAACCUUGUUU Cleavage BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR5302a Solyc03g051625.1.1 3.0 13.125 1 21 104 125 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation LOW QUALITY:BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *-* A0A061FD65_THECC) 1 sly-miR5302a Solyc04g015635.1.1 3.0 15.269 1 21 332 353 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *-* A0A061FD65_THECC) 1 sly-miR5302a Solyc12g019225.1.1 3.0 16.614 1 21 428 449 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain (AHRD V3.3 *** A0A061DK10_THECC) 1 sly-miR5302a Solyc09g063157.1.1 3.0 13.7 1 21 491 512 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR5302a Solyc12g021263.1.1 3.0 11.384 1 21 143 164 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain (AHRD V3.3 *** A0A061DK10_THECC) 1 sly-miR5302a Solyc09g055547.1.1 3.0 11.97 1 21 539 560 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR5302a Solyc10g009055.1.1 3.0 13.432 1 21 500 521 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain (AHRD V3.3 *** A0A061DK10_THECC) 1 sly-miR5302a Solyc09g059560.2.1 3.0 10.301 1 21 62 83 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR5302a Solyc09g014977.1.1 3.0 12.294 1 21 759 780 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR5302a Solyc03g078075.1.1 3.0 12.385 1 21 3971 3992 AAACGAGGUU-UGUUACUUUGG UGAAAGUAGCACAACCUUGUUU Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *-* A0A061FD65_THECC) 1 sly-miR5302a Solyc04g056745.1.1 3.0 12.385 1 21 13 34 AAACGAGGUUUGUU-ACUUUGG UUAAAAUCAGCAAACCUCGUUU Cleavage Agenet domain-containing protein / bromo-adjacent domain-containing protein, putative (AHRD V3.3 *-* A0A061F581_THECC) 1 sly-miR5302a Solyc08g079750.3.1 3.0 18.989 1 21 6154 6174 AAACGAGGUUUGUUACUUUGG ACAAGGAAAUGAACCUUGUUU Cleavage 1-aminocyclopropane-1-carboxylate synthase family protein (AHRD V3.3 *** B9GVV0_POPTR) 1 sly-miR5302b-3p Solyc02g071040.3.1 3.0 8.479 1 22 3660 3683 UUUUCAACUAUAGCA--UUAUUUU UAAAUAAACUGCUCUAGUUGAAAA Translation Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** A0A0V0IXC3_SOLCH) 1 sly-miR5302b-3p Solyc08g078530.3.1 3.0 12.775 1 22 2718 2739 UUUUCAACUAUAGCAUUAUUUU GAAGUAGAGCUGUAGUUGAGAA Cleavage Agenet-like domain-containing protein (AHRD V3.3 *** A0A103XFP8_CYNCS) 1 sly-miR5302b-3p Solyc04g055260.3.1 3.0 10.988 1 22 892 914 UUUUCAACUAUA-GCAUUAUUUU GAAGUGAUGCAUAUUGUUGAAAA Translation S-adenosyl-L-methionine:benzoic acid/salicylic acid carboxyl methyltransferase (AHRD V3.3 *** H9BID1_NICAT) 1 sly-miR5302b-3p Solyc06g009050.3.1 3.0 14.592 1 22 496 517 UUUUCAACUAUAGCAUUAUUUU UGAAUGAUGUUGUAGUUGAGAU Cleavage Adenine nucleotide alpha hydrolases-like superfamily protein (AHRD V3.3 *** AT2G47710.1) 1 sly-miR5302b-3p Solyc04g056360.3.1 3.0 14.37 1 22 1312 1333 UUUUCAACUAUAGCAUUAUUUU CAAAUGGUGCUACGGUUGGAAA Translation WRKY transcription factor 36 1 sly-miR5302b-3p Solyc04g049310.2.1 3.0 15.96 1 22 642 663 UUUUCAACUAUAGCAUUAUUUU GAAAUAGUGAUAAAGUUGAAGA Translation sucrose synthase 5 (AHRD V3.3 --* AT5G37180.1) 1 sly-miR5302b-3p Solyc08g075850.3.1 3.0 13.921 1 22 737 758 UUUUCAACUAUAGCAUUAUUUU AAAAUUAUGGUAUACUUGAAAA Cleavage 50S ribosomal protein L24 (AHRD V3.3 *** W9QWA0_9ROSA) 1 sly-miR5302b-3p Solyc05g015550.2.1 3.0 11.084 1 22 676 697 UUUUCAACUAUAGCAUUAUUUU GGAAUUAUGCUAUUGUUGAAAC Translation Nuclear transcription factor Y protein (AHRD V3.3 *** I3TAW1_MEDTR) 1 sly-miR5302b-5p Solyc08g062330.3.1 3.0 18.044 1 22 1146 1169 UGAAAUGCUAUAGUUG-GA-AAGU ACUUAUUGCAACUAUGGCAUUUCA Cleavage Ankyrin repeat family protein (AHRD V3.3 *** F8WLA0_CITUN) 1 sly-miR5302b-5p Solyc02g077190.2.1 3.0 12.58 1 22 1506 1527 UGAAAUGCUAUAGUUGGAAAGU AUUUUCCAGCUAUGGCAAUUUA Cleavage chromatin remodeling factor18 (AHRD V3.3 --* AT1G48310.2) 1 sly-miR5302b-5p Solyc02g063000.3.1 3.0 4.622 1 22 69 90 UGAAAUGCUAUAGUUGGAAAGU CUUUUCCAAUUAUAGUGUUACA Cleavage Glycosyltransferase (AHRD V3.3 *** K4B6I8_SOLLC) 1 sly-miR5302b-5p Solyc02g080670.3.1 3.0 6.526 1 22 1940 1961 UGAAAUGCUAUAGUUGGAAAGU AUUGUUCAACUGUAUCAUUUCA Cleavage L-ascorbate oxidase (AHRD V3.3 *** A0A0B0MPT8_GOSAR) 1 sly-miR5302b-5p Solyc03g111090.3.1 3.0 9.451 1 22 8970 8991 UGAAAUGCUAUAGUUGGAAAGU UAUUUCUGACUAUAGCAUUGUA Cleavage Transcription factor GTE10 (AHRD V3.3 *** W9SF96_9ROSA) 1 sly-miR5302b-5p Solyc12g056720.2.1 3.0 13.391 1 22 303 325 UGAAAUGCUAUAGU-UGGAAAGU UGUUUUCGUACUAUAGUAUUUCG Cleavage 3-ketoacyl-CoA synthase (AHRD V3.3 *** K4DG03_SOLLC) 1 sly-miR5302b-5p Solyc10g006420.3.1 3.0 20.098 1 22 164 185 UGAAAUGCUAUAGUUGGAAAGU GUAUUCUAACAAUGGCAUUUCA Cleavage Homeobox-leucine zipper family protein (AHRD V3.3 *-* B9GU68_POPTR) 1 sly-miR5302b-5p Solyc12g007010.2.1 3.0 7.237 1 22 22 44 UGAAAUGCUAUAGUUGGA-AAGU UCUUCUCCAACUCUAACAUUUCA Translation fe-S cluster assembly factor HCF101 1 sly-miR5302b-5p Solyc02g080260.3.1 3.0 19.492 1 22 2968 2989 UGAAAUGCUAUAGUUGGAAAGU CGCUACUAACUGUAGCAUUUCA Cleavage Woolly 1 sly-miR5302b-5p Solyc02g088000.3.1 3.0 16.287 1 22 4333 4354 UGAAAUGCUAUAGUUGGAAAGU AAGUUCCAAUGAUGGCAUUUCA Cleavage Starch synthase, chloroplastic/amyloplastic (AHRD V3.3 *** K4BBV6_SOLLC) 1 sly-miR5303 Solyc01g007750.3.1 3.0 8.402 1 21 3041 3062 UUUUU-GAAGAGUUCGAGCAAC GUUGCUUGGACUCUUUUAAAAA Cleavage Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT2G36000.1) 1 sly-miR5303 Solyc04g005710.2.1 3.0 13.975 1 21 1343 1363 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGGAUCCUUUAAAAG Translation R2R3MYB transcription factor 88 1 sly-miR5303 Solyc01g090880.3.1 3.0 22.454 1 21 1105 1125 UUUUUGAAGAGUUCGAGCAAC GUUGUUUGGAGUCUUCAAGAA Translation Holliday junction resolvase-like protein (AHRD V3.3 *** A0A072UJ99_MEDTR) 1 sly-miR5303 Solyc07g065860.3.1 3.0 11.515 1 21 1048 1068 UUUUUGAAGAGUUCGAGCAAC GUUGAUCGGAUUUUUUAAAAA Cleavage Receptor protein kinase, putative (AHRD V3.3 *** B9T1Q4_RICCO) 1 sly-miR5303 Solyc02g071350.3.1 3.0 13.039 1 21 5186 5206 UUUUUGAAGAGUUCGAGCAAC GUUGCUCGCAUUCUUCAAAUA Cleavage ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) 1 sly-miR5303 Solyc03g095310.3.1 3.0 12.673 1 21 857 878 UUUUUGAAGAGUUCG-AGCAAC AAAGCUUCGAACUCUUCAAAAA Cleavage Cytochrome P450 protein (AHRD V3.3 *** A0A0B0P3Q6_GOSAR) 1 sly-miR5303 Solyc03g097690.3.1 3.0 17.786 1 21 2703 2724 UUUUUGAAGA-GUUCGAGCAAC GUUAUUCGAGCCUCUUCAAAAA Translation Kinase family protein (AHRD V3.3 *** D7MQB8_ARALL) 1 sly-miR5303 Solyc06g065945.1.1 3.0 17.179 1 21 1925 1946 UUUUUGAAG-AGUUCGAGCAAC GUUGUUAGAAUUGCUUCAAAAA Translation Protein FAR1-RELATED SEQUENCE 6 (AHRD V3.3 *** A0A0B2QKT7_GLYSO) 1 sly-miR5303 Solyc09g005890.3.1 3.0 12.771 1 21 2221 2242 UUUUUGAAGAGU-UCGAGCAAC GUUACUUGAUACUCUUCAAAAG Cleavage centrosomal protein of 135 kDa-like protein (AHRD V3.3 *** AT2G37370.3) 1 sly-miR5303 Solyc04g005230.3.1 3.0 15.876 1 21 1523 1543 UUUUUGAAGAGUUCGAGCAAC GUUACUCAAACUCUUCAAAAC Cleavage Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A061EKQ6_THECC) 1 sly-miR5303 Solyc09g009510.3.1 3.0 15.581 1 21 1266 1286 UUUUUGAAGAGUUCGAGCAAC GUCGUUGGGACUCUUCAAAAA Cleavage Alpha/beta-Hydrolases superfamily protein (AHRD V3.3 *** A0A061ETT5_THECC) 1 sly-miR5303 Solyc04g072530.2.1 3.0 14.601 1 21 1082 1102 UUUUUGAAGAGUUCGAGCAAC GUUGUAUAAACUCUUCAAAAA Cleavage Mitochondrial transcription termination factor family protein (AHRD V3.3 *-* AT5G64950.1) 1 sly-miR5303 Solyc03g080190.3.1 3.0 18.08 1 21 1125 1146 UUUUUGAAGAGUU-CGAGCAAC AUUGUUUGGAACUUUUCAAGAA Cleavage 2-oxoglutarate Fe(II) dependent oxygenase superfamily protein 1 sly-miR5303 Solyc08g061694.1.1 3.0 15.091 1 21 118 140 UUUUUGAAGA-GUUCG-AGCAAC AUUGCUACGAACGUUUUCAAAGA Translation Adenylate isopentenyltransferase (AHRD V3.3 *-* B3XZI3_IPONI) 1 sly-miR5303 Solyc08g061698.1.1 3.0 13.801 1 21 601 623 UUUUUGAAGA-GUUCG-AGCAAC AUUGCUACGAACAUUUUCAAAGA Translation Adenylate isopentenyltransferase (AHRD V3.3 *** F6KQG9_MALDO) 1 sly-miR5303 Solyc12g009690.1.1 3.0 22.881 1 21 530 552 UUUUUGAAGAGUU-CGAG-CAAC CUUGGCUCGGAACUCUUCAAGAG Cleavage LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT3G24240.1) 1 sly-miR5303 Solyc06g005620.3.1 3.0 14.384 1 21 1283 1303 UUUUUGAAGAGUUCGAGCAAC CUUGUUCAGACUCUUCAAAAU Cleavage zinc transporter 1 sly-miR5303 Solyc08g061748.1.1 3.0 13.853 1 21 514 536 UUUUUGAAGA-GUUCG-AGCAAC AUUGCUACGAACGUUUUCAAAGA Translation Adenylate isopentenyltransferase (AHRD V3.3 *-* F6KQG8_MALDO) 1 sly-miR5303 Solyc05g051340.2.1 3.0 12.325 1 21 2361 2381 UUUUUGAAGAGUUCGAGCAAC UGUGGUUGGACUCUUCAAAAA Cleavage Pentatricopeptide repeat-containing family protein (AHRD V3.3 *** B9H373_POPTR) 1 sly-miR5303 Solyc09g098340.3.1 3.0 11.842 1 21 4472 4492 UUUUUGAAGAGUUCGAGCAAC AAUAUUCGGACUCUUCAAAAA Cleavage Eukaryotic aspartyl protease family protein (AHRD V3.3 *** AT1G05840.1) 1 sly-miR5303 Solyc12g009510.2.1 3.0 22.297 1 21 2001 2023 UUUUUGAAGAGUU-CGAG-CAAC CUUGGCUCGGAACUCUUCAAGAG Cleavage Leucine-rich repeat-containing protein (AHRD V3.3 *** A0A103YKB1_CYNCS) 1 sly-miR5303 Solyc02g094030.3.1 3.0 21.764 1 21 685 705 UUUUUGAAGAGUUCGAGCAAC UUUACUUGAGCUUUUCAAAGA Cleavage DSR6 (AHRD V3.3 *** A0A076V4W1_CAPAN) 1 sly-miR5303 Solyc08g023493.1.1 3.0 23.03 1 21 1083 1103 UUUUUGAAGAGUUCGAGCAAC AUGGCUCGAGCUCUCCAAAAA Cleavage Stem-specific TSJT1 (AHRD V3.3 *** A0A0B0N6F5_GOSAR) 1 sly-miR5303 Solyc01g010410.3.1 3.0 16.508 1 21 726 746 UUUUUGAAGAGUUCGAGCAAC AUUGGUCGGACUCUCCAAAAA Cleavage Zinc finger family protein (AHRD V3.3 *** B9HID5_POPTR) 1 sly-miR5303 Solyc09g090550.3.1 3.0 16.7 1 21 2012 2032 UUUUUGAAGAGUUCGAGCAAC AUUGUAUGAACUCUUCAAGAG Cleavage Actin-related protein 2/3 complex subunit 2 (AHRD V3.3 *** A0A061EMV9_THECC) 1 sly-miR5303 Solyc02g083790.3.1 3.0 15.802 1 21 689 710 UUUUUGAAGAGUUC-GAGCAAC AUUACUCAGAAUUCUUCAAGAA Cleavage Pathogenesis-related thaumatin family protein (AHRD V3.3 *** G7JW96_MEDTR) 1 sly-miR5303 Solyc01g091010.3.1 3.0 23.919 1 21 499 520 UUUUUGAAG-AGUUCGAGCAAC CUUGCUCAAGUUUCUUCAAAAA Translation CRABS CLAW-like protein1a 1 sly-miR5304 Solyc08g075510.3.1 3.0 13.481 1 21 508 529 UCAAUGCUACAUACUCA-UCCC CGGAGUGAGUAUGGGGCGUUGA Translation JmjC domain-containing protein (AHRD V3.3 *** A0A103XFS1_CYNCS),Pfam:PF13621 1 sly-miR6022 Solyc07g042130.3.1 3.0 18.462 1 21 2934 2955 UGGAAGGGAGAAUAUCCA-GGA UCCGUGGGUAUUCUCUCUUUUA Cleavage Pentatricopeptide repeat superfamily protein (AHRD V3.3 *** A0A061FYX7_THECC) 1 sly-miR6022 Solyc03g113040.3.1 3.0 14.8 1 21 4305 4325 UGGAAGGGAGAAUAUCCAGGA UCCUGGAUUUUCUCUUUUUCG Cleavage ABC transporter A family member 8 (AHRD V3.3 *** A0A199UWV0_ANACO) 1 sly-miR6022 Solyc02g020890.3.1 3.0 10.129 1 21 1623 1644 UGGAAGGGAGA-AUAUCCAGGA UCCUGAAUAUCUUUCCCUUCUA Translation Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *-* A0A0K9PU50_ZOSMR) 1 sly-miR6022 Solyc09g018230.1.1 3.0 12.611 1 21 440 460 UGGAAGGGAGAAUAUCCAGGA UAUUGGAUAUUUUACCUUCCA Cleavage U-box domain-containing protein 16 (AHRD V3.3 *** W9QXE8_9ROSA) 1 sly-miR6022 Solyc02g087840.3.1 3.0 20.735 1 21 1003 1023 UGGAAGGGAGAAUAUCCAGGA UCAUGGAUUUUCUUCCUUCUA Cleavage Homeobox associated leucine zipper protein (AHRD V3.3 *** A0A072U5Q1_MEDTR) 1 sly-miR6022 Solyc07g065320.3.1 3.0 19.655 1 21 2204 2224 UGGAAGGGAGAAUAUCCAGGA ACCUGGAAAUUCUCUCUUUUG Cleavage ABC subfamily C transporter (AHRD V3.3 *** A0A0D3RBU8_WHEAT) 1 sly-miR6022 Solyc04g074130.3.1 3.0 9.903 1 21 82 102 UGGAAGGGAGAAUAUCCAGGA ACUUUGACAUUUUCCCUUCCA Cleavage Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G64970.1) 1 sly-miR6023 Solyc07g005150.2.1 3.0 14.314 1 22 119 140 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAGACACUUUCUUGGAA Cleavage Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *** AT4G08850.1) 1 sly-miR6023 Solyc09g055760.3.1 3.0 15.948 1 22 1370 1392 UUCCAUGAAAGA-GUUUUUGGAU AUCUAUAAACCUCUUUUAUGGAA Cleavage myosin heavy chain-like protein (AHRD V3.3 *** AT5G59210.2) 1 sly-miR6023 Solyc10g076440.1.1 3.0 19.831 1 22 1050 1071 UUCCAUGAAAGAGUUUUUGGAU AUUCACAAACUCUUGUAUGGAA Cleavage LOW QUALITY:Disease resistance protein (AHRD V3.3 *** W9R405_9ROSA) 1 sly-miR6023 Solyc01g103150.3.1 3.0 21.215 1 22 820 843 UUCCAUGAA--AGAGUUUUUGGAU GGCCAAAAAUUUUGAUUCAUGGAA Translation Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** AT1G10280.1) 1 sly-miR6023 Solyc11g006470.2.1 3.0 17.837 1 22 1104 1126 UUCC-AUGAAAGAGUUUUUGGAU AGCCAAAAGCUCUUUUGUUGGAA Cleavage Core-2/I-branching beta-1,6-N-acetylglucosaminyltransferase family protein (AHRD V3.3 *** AT5G22070.1) 1 sly-miR6023 Solyc12g009200.2.1 3.0 15.963 1 22 125 146 UUCCAUGAAAGAGUUUUUGGAU CUACAAAAACUUUUUCAGGGAA Cleavage Chlorophyll a-b binding protein, chloroplastic (AHRD V3.3 *** K4DC08_SOLLC) 1 sly-miR6023 Solyc09g064670.2.1 3.0 21.281 1 22 98 119 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAAACGAGUUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1) 1 sly-miR6023 Solyc12g036793.1.1 3.0 17.135 1 22 393 414 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAAACAAGUUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1) 1 sly-miR6023 Solyc12g100010.1.1 3.0 16.629 1 22 170 191 UUCCAUGAAAGAGUUUUUGGAU AUCCAAAAACGAAUUCAUGGAA Translation Leucine-rich-repeat receptor-like protein (AHRD V3.3 *** A0A0D4WVW2_GOSBA) 1 sly-miR6023 Solyc08g081640.3.1 3.0 16.416 1 22 558 579 UUCCAUGAAAGAGUUUUUGGAU GUCCAAACAGUUUUUCAUGGGA Cleavage Transducin/WD40 repeat-like superfamily protein (AHRD V3.3 *** AT4G11270.2) 1 sly-miR6023 Solyc10g050225.1.1 3.0 15.009 1 22 1589 1611 UUCCAUGAAAGA-GUUUUUGGAU GUCCAAAAACAUCUCACAUGGAA Translation Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151QRB6_CAJCA) 1 sly-miR6023 Solyc12g040740.2.1 3.0 19.128 1 22 34 56 UUCCAUGAA-AGAGUUUUUGGAU UUCCAAAAACUGAAUUCAUGGAA Translation Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT4G08850.1) 1 sly-miR6024 Solyc10g051170.2.1 3.0 19.949 1 22 688 710 UU-UUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUAGCUAACAA Cleavage Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR6024 Solyc05g005330.3.1 3.0 20.382 1 22 1977 1999 UU-UUAGCAAGAGUUGUUUUACC GGUAAGACAACUCUCGCUAACAA Cleavage Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR6024 Solyc07g042180.3.1 3.0 16.032 1 22 60 81 UUUUAGCAAGAGUUGUUUUACC GGUGUAGCAAUUUUUGCUAAAA Cleavage RNA-binding protein (AHRD V3.3 *** A0A0K9PBY9_ZOSMR) 1 sly-miR6024 Solyc09g092290.1.1 3.0 22.48 1 22 574 595 UUUUAGCAAGAGUUGUUUUACC GGAAAAACAACUCUUGCCAAGA Cleavage Ph-3 resistance protein (AHRD V3.3 *** A0A060D304_SOLPI) 1 sly-miR6024 Solyc09g018220.2.1 3.0 18.841 1 22 569 590 UUUUAGCAAGAGUUGUUUUACC GGGAAAACAACUCUUGCCAAGA Cleavage Tobacco mosaic virus resistance-2 1 sly-miR6024 Solyc03g046470.3.1 3.0 18.742 1 22 2657 2679 UUUUAGCAAGAGUUGUU-UUACC GGAAAGAACAACUCUUGCUAAAC Cleavage O-fucosyltransferase family protein (AHRD V3.3 *** AT3G30300.2) 1 sly-miR6024 Solyc09g007710.3.1 3.0 21.575 1 22 1004 1025 UUUUAGCAAGAGUUGUUUUACC GGUAAAACAACUGUUGCCAAAG Translation Disease resistance protein (TIR-NBS-LRR class) family (AHRD V3.3 *** AT5G36930.2) 1 sly-miR6024 Solyc11g068370.2.1 3.0 13.551 1 22 1421 1442 UUUUAGCAAGAGUUGUUUUACC AGUAAAAUGAUUUUUGCUAAAU Cleavage bZIP transcription factor family protein (AHRD V3.3 *** AT1G08320.4) 1 sly-miR6024 Solyc05g009750.1.1 3.0 16.469 1 22 181 202 UUUUAGCAAGAGUUGUUUUACC GGGAAAACAGCUCUGGCUAGAA Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC) 1 sly-miR6024 Solyc05g009740.1.1 3.0 20.41 1 22 148 169 UUUUAGCAAGAGUUGUUUUACC GGCAAAACAACUUUGGCUAGAA Cleavage Disease resistance protein (CC-NBS-LRR class) family (AHRD V3.3 *** AT5G48620.6) 1 sly-miR6024 Solyc10g005180.3.1 3.0 10.274 1 22 919 940 UUUUAGCAAGAGUUGUUUUACC GGUAACAUAAUUCUGGCUAAAA Cleavage Ycf3-interacting protein 1, chloroplastic (AHRD V3.3 *** Y3IP1_TOBAC) 1 sly-miR6024 Solyc05g009760.2.1 3.0 20.289 1 22 417 438 UUUUAGCAAGAGUUGUUUUACC GGGAAAACAGCUCUGGCUAGAA Cleavage NBS-LRR resistance protein-like protein (AHRD V3.3 *** A1Y9Q8_SOLLC) 1 sly-miR6024 Solyc11g069620.2.1 3.0 20.482 1 22 721 742 UUUUAGCAAGAGUUGUUUUACC GGUAAGACAACACUAGCUAAAG Translation Disease resistance protein (AHRD V3.3 *** A0A068EUA9_SOLLC) 1 sly-miR6024 Solyc04g056270.3.1 3.0 19.368 1 22 2298 2321 UUUUAGCAA-GAGUU-GUUUUACC AGUAAAAUUAACUCAUUGCUAAGA Translation ER66 1 sly-miR6024 Solyc09g065100.2.1 3.0 16.98 1 22 1244 1265 UUUUAGCAAGAGUUGUUUUACC UGUAGAGCUAUUCUUGCUAAGA Cleavage bHLH transcription factor 150 1 sly-miR6024 Solyc01g006000.3.1 3.0 19.133 1 22 1782 1803 UUUUAGCAAGAGUUGUUUUACC UACAAAACAGCUUUUGUUAGAA Cleavage GPI mannosyltransferase 2 (AHRD V3.3 *** W9S353_9ROSA) 1 sly-miR6024 Solyc04g012010.3.1 3.0 17.317 1 22 558 579 UUUUAGCAAGAGUUGUUUUACC GGCAAAACAACGCUCGCUAAAA Translation Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *-* AT5G38350.1) 1 sly-miR6024 Solyc01g067490.3.1 3.0 20.47 1 22 573 594 UUUUAGCAAGAGUUGUUUUACC AAUAGAGCAGCUCUUGUUGAGA Cleavage Anaphase-promoting complex subunit 7-like protein (AHRD V3.3 *** A0A0B0MSH3_GOSAR) 1 sly-miR6024 Solyc03g025540.3.1 3.0 21.583 1 22 2224 2245 UUUUAGCAAGAGUUGUUUUACC CAUAAAACAGUUCUUGUUGGAG Cleavage Cleavage and polyadenylation specificity factor subunit 2 (AHRD V3.3 *** CPSF2_ARATH) 1 sly-miR6024 Solyc04g016420.3.1 3.0 13.122 1 22 111 132 UUUUAGCAAGAGUUGUUUUACC AUUGGGGCAACUUUUGCUAGAA Cleavage Mediator of RNA polymerase II transcription subunit 23 (AHRD V3.3 *-* A0A061EVL7_THECC) 1 sly-miR6024 Solyc01g110180.3.1 3.0 9.422 1 22 1087 1109 UUUUAGCAAG-AGUUGUUUUACC AUCAAAAUAACUGCUUGCUAAAG Translation B-box zinc finger family protein (AHRD V3.3 *** AT4G39070.1) 1 sly-miR6024 Solyc06g065040.3.1 3.0 9.153 1 22 106 128 UUUUAGCAAGAGUU-GUUUUACC AUUAAAGUUAACUUUUGCUAGAA Cleavage bHLH transcription factor 086 1 sly-miR6024 Solyc01g089950.3.1 3.0 17.745 1 22 640 661 UUUUAGCAAGAGUUGUUUUACC UGUACAACAACUUGUGUUAAAA Translation F-box family protein (AHRD V3.3 *-* D7MLR5_ARALL) 1 sly-miR6024 Solyc10g054387.1.1 3.0 18.855 1 22 413 435 UUUUAGCAAGAGUU-GUUUUACC CAUAAAACUAACUCUUGCAAAGA Cleavage Ribonucleoside-diphosphate reductase (AHRD V3.3 --* Q9ZR56_TOBAC) 1 sly-miR6024 Solyc07g065210.3.1 3.0 12.445 1 22 3399 3421 UUUUAGCAAGA-GUUGUUUUACC AAUGAAACAGUAUCUUGCUGAAA Translation Kinesin related protein (AHRD V3.3 *** Q8GZU1_SOLLC) 1 sly-miR6024 Solyc04g009420.3.1 3.0 19.114 1 22 502 523 UUUUAGCAAGAGUUGUUUUACC GAUAAGCUAAUUCUUGCUGAAA Cleavage PsbP domain protein (AHRD V3.3 *** G7JC63_MEDTR) 1 sly-miR6024 Solyc02g068795.1.1 3.0 16.047 1 22 308 329 UUUUAGCAAGAGUUGUUUUACC GAUACAACGGCUCUUGUUAAAG Cleavage Rho GTPase activation protein (RhoGAP) with PH domain-containing protein (AHRD V3.3 --* AT5G12150.2) 1 sly-miR6026 Solyc01g107000.2.1 3.0 12.626 1 22 3694 3717 UUCUUGGCUAGA--GUUGUAUUGC UCAGUACAACCAUUUAGCCAAGAA Cleavage Endo-1,4-beta-xylanase C (AHRD V3.3 *** A0A199V4M1_ANACO) 1 sly-miR6026 Solyc01g065550.3.1 3.0 8.454 1 22 931 953 UUC-UUGGCUAGAGUUGUAUUGC ACAAUACAACUUUGGCUAAUGAA Cleavage Dehydration-induced 19-like protein (AHRD V3.3 *** E3T7S4_GOSHI) 1 sly-miR6026 Solyc10g051170.2.1 3.0 19.949 1 22 689 710 UUCUUGGCUAGAGUUGUAUUGC GUAAGACAACUCUAGCUAACAA Cleavage Disease resistance protein, putative (AHRD V3.3 *-* Q6L432_SOLDE) 1 sly-miR6026 Solyc11g008540.2.1 3.0 16.112 1 22 115 136 UUCUUGGCUAGAGUUGUAUUGC GCAAUUCAGCACUAGUCAAGAA Cleavage Dicer-like 2b 1 sly-miR6026 Solyc02g086630.2.1 3.0 15.019 1 22 1158 1180 UUCUUGGCUAG-AGUUGUAUUGC UCAAUAGAACUUCUAGUUAAGAA Translation Sister chromatid cohesion PDS5 B-B (AHRD V3.3 *-* A0A0B0PPN5_GOSAR) 1 sly-miR6026 Solyc11g010840.2.1 3.0 10.587 1 22 1021 1042 UUCUUGGCUAGAGUUGUAUUGC UCAAUACAACCUUUGCCGAGAA Translation RNA-binding KH domain protein (AHRD V3.3 *** G7JV44_MEDTR) 1 sly-miR6027-3p Solyc02g027080.2.1 3.0 14.385 1 22 1429 1450 UGAAUCCUUCGGCUAUCCAUAA UUAUGGAUGGCUGAGGGGUUCC Cleavage Disease resistance protein BS2 (AHRD V3.3 *** Q9SNW0_9SOLA) 1 sly-miR6027-3p Solyc04g009155.1.1 3.0 16.806 1 22 285 306 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCUGAAGGGUUUG Cleavage Disease resistance family protein (AHRD V3.3 *-* B9GY55_POPTR) 1 sly-miR6027-3p Solyc04g009090.1.1 3.0 17.386 1 22 187 208 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCCGAGGGUUUCA Cleavage Disease resistance family protein (AHRD V3.3 *-* B9NHG2_POPTR) 1 sly-miR6027-3p Solyc04g026110.3.1 3.0 14.201 1 22 1117 1138 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUGGCCGAGGGUUUCA Cleavage Disease resistance family protein (AHRD V3.3 *** B9GY55_POPTR) 1 sly-miR6027-3p Solyc04g007070.3.1 3.0 20.864 1 22 1532 1553 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUAGCCGAGGGGUUGA Cleavage Disease resistance protein (NBS-LRR class) family (AHRD V3.3 *** AT5G38350.1) 1 sly-miR6027-3p Solyc05g013280.3.1 3.0 13.656 1 22 4344 4365 UGAAUCCUUCGGCUAUCCAUAA UUGUGGGUAGCUGAAGGGUUUG Cleavage Pseudomonas resistance 1 sly-miR6027-3p Solyc05g012910.3.1 3.0 17.181 1 22 3127 3148 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUAGCGGAAGGCUUCA Translation NBS-LRR resistance protein-like protein (AHRD V3.3 *-* A1Y9Q6_9SOLN) 1 sly-miR6027-3p Solyc05g012900.3.1 3.0 23.127 1 22 3218 3239 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUAGCGGAAGGCUUCA Translation JJH-R-like protein 1 sly-miR6027-3p Solyc03g005660.3.1 3.0 22.349 1 22 1449 1470 UGAAUCCUUCGGCUAUCCAUAA UUGUGGAUCGCGGAAGGGUUCA Translation Disease resistance protein (AHRD V3.3 *** A0A103XDQ0_CYNCS) 1 sly-miR6027-3p Solyc01g090430.3.1 3.0 24.454 1 22 1478 1499 UGAAUCCUUCGGCUAUCCAUAA UUAUGGAUCGCGGAAGGGUUUA Translation NRC1 1 sly-miR6027-3p Solyc02g069940.3.1 3.0 14.944 1 22 1542 1563 UGAAUCCUUCGGCUAUCCAUAA AAAUGGAAAGCUGGAGGAUUCU Cleavage WPP domain associated protein 1 sly-miR6027-5p Solyc03g007010.3.1 3.0 24.136 1 22 490 511 AUGGGUAGCACAAGGAUUAAUG CAUUAGCCUUUGUGUUGCCCAU Cleavage Dead box ATP-dependent RNA helicase, putative (AHRD V3.3 *** B9R9L5_RICCO) 1 sly-miR6027-5p Solyc12g009550.1.1 3.0 17.187 1 22 75 96 AUGGGUAGCACAAGGAUUAAUG CGUUGAUCUUUCUGCUACUUAU Translation LOW QUALITY:Leucine-rich repeat receptor-like protein kinase family protein (AHRD V3.3 *-* AT3G24240.1) 1 sly-miR6027-5p Solyc05g055140.1.1 3.0 17.818 1 22 98 119 AUGGGUAGCACAAGGAUUAAUG UAUUAAUCCUUGUUAUACUUAU Translation RING/U-box superfamily protein (AHRD V3.3 *** A0A061FQW5_THECC) 1 sly-miR6027-5p Solyc03g005960.3.1 3.0 9.406 1 22 3276 3297 AUGGGUAGCACAAGGAUUAAUG UCUUGAUCCUUGUGUUAUCUAC Cleavage protein kinase LESK1 1 sly-miR6027-5p Solyc08g068718.1.1 3.0 18.382 1 22 141 162 AUGGGUAGCACAAGGAUUAAUG UGUUGAUACUGGUGCUACUCAU Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RDV9_CAJCA) 1 sly-miR6027-5p Solyc01g100790.1.1 3.0 17.051 1 22 1331 1352 AUGGGUAGCACAAGGAUUAAUG CUUUAAUUCUUGGGCUAGCCAU Translation Pentatricopeptide repeat-containing protein (AHRD V3.3 *** A0A103Y873_CYNCS) 1 sly-miR6027-5p Solyc08g016448.1.1 3.0 18.491 1 22 606 627 AUGGGUAGCACAAGGAUUAAUG AGUUGAUACUGGUGCUACUCAU Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151RDV9_CAJCA) 1 sly-miR6027-5p Solyc01g059857.1.1 3.0 21.546 1 22 1071 1092 AUGGGUAGCACAAGGAUUAAUG AGUUGAUACUGGUGCUACUCAU Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *** A0A151U9A5_CAJCA) 1 sly-miR9469-3p Solyc03g121850.3.1 3.0 12.36 1 21 3260 3281 AUUCGGUCU-UCUUAUGUGGAC CUUUACAUGAGAGAGAUCGAAU Translation DNA gyrase subunit B (AHRD V3.3 *-* A0A1D1ZIS3_9ARAE) 1 sly-miR9469-3p Solyc04g009950.3.1 3.0 15.476 1 21 423 443 AUUCGGUCUUCUUAUGUGGAC CUUCAAUUAAGAAGACUGAAU Cleavage cell division cycle 5 1 sly-miR9469-5p Solyc01g010160.3.1 3.0 14.304 1 21 230 252 CCACAUAA-GAAGACCGAAU-UC GAGAUUUGGUCUUUAUUAUGUGG Cleavage Beta-glucosidase, putative (AHRD V3.3 *-* B9REF8_RICCO) 1 sly-miR9469-5p Solyc03g118890.3.1 3.0 15.932 1 21 1399 1419 CCACAUAAGAAGACCGAAUUC AGAUUCGGUCUUGUUCUGUGG Translation Protein phosphatase 2C family protein (AHRD V3.3 *** AT1G18030.1) 1 sly-miR9469-5p Solyc06g067910.3.1 3.0 23.261 1 21 1074 1094 CCACAUAAGAAGACCGAAUUC UAAUUCGGGUUCCUUGUGUGG Translation transmembrane protein, putative (Protein of unknown function, DUF642) (AHRD V3.3 *** AT5G11420.1) 1 sly-miR9470-3p Solyc11g042580.1.1 3.0 18.42 1 20 61 80 UUUGGCUCAUGGAUUUUAGC UCUGAAAUCCGUGAGCCAGG Cleavage Ethylene-responsive transcription factor ERF021 (AHRD V3.3 *** ERF21_ARATH) 1 sly-miR9470-3p Solyc02g080460.2.1 3.0 12.702 1 20 786 805 UUUGGCUCAUGGAUUUUAGC GUUAAGGUCCAUGAGCUGGA Cleavage Kinesin-like protein (AHRD V3.3 *-* A0A0R0FW85_SOYBN) 1 sly-miR9470-3p Solyc07g056030.3.1 3.0 17.618 1 20 2275 2294 UUUGGCUCAUGGAUUUUAGC GCUGAAAUCCAUGGGACAGA Cleavage Nuclear-interacting partner of ALK (AHRD V3.3 *** W9QKR2_9ROSA) 1 sly-miR9470-3p Solyc08g081300.3.1 3.0 12.445 1 20 2275 2294 UUUGGCUCAUGGAUUUUAGC UCUAAAAUUCAUAAGUCAAA Cleavage RING/U-box superfamily protein (AHRD V3.3 *** AT5G41350.2) 1 sly-miR9470-3p Solyc11g012705.1.1 3.0 12.193 1 20 324 343 UUUGGCUCAUGGAUUUUAGC GCUAAUAUUCAUGAUCCAAA Cleavage Pollen Ole e 1 allergen and extensin family protein (AHRD V3.3 *** AT5G47635.1) 1 sly-miR9470-3p Solyc01g105720.2.1 3.0 18.439 1 20 1345 1364 UUUGGCUCAUGGAUUUUAGC GUUGAAAUCCAAGAGUCAGA Translation LOW QUALITY:Peptide upstream ORF protein (AHRD V3.3 *** G7J561_MEDTR) 1 sly-miR9470-3p Solyc04g009920.3.1 3.0 20.496 1 20 832 851 UUUGGCUCAUGGAUUUUAGC GCUCAGGUUUAUGAGCCAAA Cleavage Hexosyltransferase (AHRD V3.3 *** K4BPE7_SOLLC) 1 sly-miR9470-3p Solyc09g014390.1.1 3.0 19.091 1 20 1069 1088 UUUGGCUCAUGGAUUUUAGC GCUAAAGUGCUUGAGCUAAA Translation LOW QUALITY:Alpha 1,4-glycosyltransferase family protein (AHRD V3.3 *** A0A061EQG3_THECC) 1 sly-miR9470-5p Solyc01g107670.2.1 3.0 13.764 1 21 178 199 UGAAA-UCCAUGAGCCUAAACU UGUUUAGGUUCUUGGAAUUUCA Translation Leucine-rich repeat receptor-like protein kinase family (AHRD V3.3 *** A0A0K9NH19_ZOSMR) 1 sly-miR9470-5p Solyc08g078680.3.1 3.0 20.188 1 21 554 575 UGAAAUCCAUGAGCCUAA-ACU AGUGUUAUCCUCAUGGAUUUCA Cleavage Sec14p-like phosphatidylinositol transfer family protein (AHRD V3.3 *** AT5G47510.4) 1 sly-miR9470-5p Solyc08g076480.3.1 3.0 17.631 1 21 2017 2037 UGAAAUCCAUGAGCCUAAACU UGUUUAGACUCGUGGAUUUGA Cleavage Plastid-lipid associated protein PAP / fibrillin family protein (AHRD V3.3 *** AT2G35490.1) 1 sly-miR9470-5p Solyc09g097920.2.1 3.0 13.462 1 21 768 788 UGAAAUCCAUGAGCCUAAACU UGUUUUGGUCUAUGGAUUUCA Cleavage Mitochondrial transcription termination factor family protein (AHRD V3.3 *** AT1G74120.1) 1 sly-miR9471a-3p Solyc03g111100.1.1 3.0 23.561 1 21 512 532 UUGGCUGAGUGAGCAUCACGG UUGUGAUGUUUCCUCAGCCAG Translation LOW QUALITY:AtIII18x5-like protein (AHRD V3.3 *** AT3G48510.1) 1 sly-miR9471a-3p Solyc07g017320.1.1 3.0 20.022 1 21 62 83 UUGGCUGAGUGAGCAUCA-CGG UUGCUGAUGCAUACUCAGCCAA Cleavage LOW QUALITY:HXXXD-type acyl-transferase family protein (AHRD V3.3 *** AT1G32910.1) 1 sly-miR9471a-3p Solyc00g040290.2.1 3.0 19.176 1 21 327 348 UUGGCUGAGUGAGCAUCA-CGG UUGCUGAUGCAUACUCAGCCAA Cleavage HXXXD-type acyl-transferase family protein (AHRD V3.3 *** AT1G32910.1) 1 sly-miR9471a-3p Solyc00g040390.2.1 3.0 19.102 1 21 328 349 UUGGCUGAGUGAGCAUCA-CGG UUGCUGAUGCAUACUCAGCCAA Cleavage HXXXD-type acyl-transferase family protein (AHRD V3.3 *** AT1G32910.1) 1 sly-miR9471a-3p Solyc07g014580.3.1 3.0 20.74 1 21 542 563 UUGGCUGAGUGAGCAUCA-CGG UUGCUGAUGCAUACUCAGCCAA Cleavage HXXXD-type acyl-transferase family protein, putative (AHRD V3.3 *** A0A061G8N7_THECC) 1 sly-miR9471a-5p Solyc12g009620.2.1 3.0 18.991 1 21 855 875 CAGGUGCUCACUCAGCUAAUA AGUUGGUUGAGAGAGCACUUG Translation Ubiquitin system component Cue protein (AHRD V3.3 *** AT5G32440.3) 1 sly-miR9471a-5p Solyc03g114870.1.1 3.0 20.771 1 21 1282 1302 CAGGUGCUCACUCAGCUAAUA AAUGAGCUGAGUGUGUAUCUG Cleavage BED zinc finger,hAT family dimerization domain (AHRD V3.3 *** A0A061DK10_THECC) 1 sly-miR9471b-3p Solyc09g061750.2.1 3.0 23.356 1 21 1310 1330 UUGGCUGAGUGAGCAUCACUG CAGUGCUGUUCGCUCAGCCAU Cleavage Cellulose synthase 2 (AHRD V3.3 *** A0A0B0N012_GOSAR) 1 sly-miR9471b-3p Solyc08g082850.3.1 3.0 20.388 1 21 1176 1196 UUGGCUGAGUGAGCAUCACUG CAUUGAUGCUUACUCGGCUGA Cleavage ABC transporter family protein (AHRD V3.3 *** B9GL16_POPTR) 1 sly-miR9471b-3p Solyc01g109030.3.1 3.0 16.552 1 21 171 193 UUGGCUGAG-UGAGCAU-CACUG AAGUGGAUGCGCAACUCAGCCAA Translation transcriptional factor B3 family protein (AHRD V3.3 *-* AT4G31640.1) 1 sly-miR9472-3p Solyc01g011340.3.1 3.0 19.459 1 21 273 295 UUCACAAUCUCUG--CUGAAAAA GUUUUCAGAUCGGAGAUUGUGAG Cleavage protein phosphatase 2A catalytic subunit 2 1 sly-miR9472-3p Solyc03g115250.3.1 3.0 19.771 1 21 74 96 UUCACAAUCUCUG-CUG-AAAAA UUUUUACAGUCAGAGGUUGUGGA Cleavage Dentin sialophosphoprotein-related, putative (AHRD V3.3 *** A0A061FY91_THECC) 1 sly-miR9472-3p Solyc10g055560.2.1 3.0 15.222 1 21 1499 1521 UUCACAAUCUCUGC-UGAA-AAA UUUCUUCAUGCAAAGAUUGUGAA Translation SBP (S-ribonuclease binding protein) family protein (AHRD V3.3 *** AT4G35070.1) 1 sly-miR9472-3p Solyc04g072050.3.1 3.0 19.069 1 21 1385 1405 UUCACAAUCUCUGCUGAAAAA CUUUUGAGCGGAGAAUGUGAA Cleavage Transmembrane protein, putative (AHRD V3.3 *** I3SNC1_MEDTR) 1 sly-miR9472-3p Solyc10g008600.3.1 3.0 20.002 1 21 546 566 UUCACAAUCUCUGCUGAAAAA AUUUUCACUAGUGAUUGUGGA Translation embryo defective 1923 (AHRD V3.3 *** AT4G28210.1) 1 sly-miR9472-3p Solyc01g088280.2.1 3.0 13.637 1 21 1860 1880 UUCACAAUCUCUGCUGAAAAA GUUUUCUGCAAAGAUUGUGGG Translation Germin-like protein 1 (AHRD V3.3 *-* A8QK89_VITVI) 1 sly-miR9472-3p Solyc11g028175.1.1 3.0 21.906 1 21 1101 1121 UUCACAAUCUCUGCUGAAAAA CUUUUGAGUAGUGAUUGUGAG Translation BED zinc finger,hAT family dimerization domain, putative (AHRD V3.3 *** A0A061FD65_THECC) 1 sly-miR9472-3p Solyc11g061774.1.1 3.0 16.924 1 21 104 125 UUCACAAUCUCUGCU-GAAAAA AUUUUCGAGGAGAAAUUGUGAA Translation Adenylate isopentenyltransferase (AHRD V3.3 *** A0A072UTI1_MEDTR) 1 sly-miR9472-5p Solyc12g014530.2.1 3.0 13.541 1 21 359 379 UUUCAGUAGACGUUGUGAAUA UAUUCACAAUGUCAAGUGAAA Cleavage L-aspartate oxidase (AHRD V3.3 *** K4DCY8_SOLLC) 1 sly-miR9472-5p Solyc08g076200.3.1 3.0 18.449 1 21 826 846 UUUCAGUAGACGUUGUGAAUA CGUUUACAAUGUUUGCUGGAA Cleavage RNA helicase DEAD27 1 sly-miR9472-5p Solyc07g006300.3.1 3.0 6.997 1 21 1652 1672 UUUCAGUAGACGUUGUGAAUA UGUUAACUAUGUCUACUGAAA Cleavage Fatty acid hydroxylase superfamily (AHRD V3.3 *** AT5G57800.1) 1 sly-miR9472-5p Solyc12g006000.1.1 3.0 9.966 1 21 1940 1960 UUUCAGUAGACGUUGUGAAUA CAUUUCCAACGUCUACUGACA Cleavage ENTH/ANTH/VHS superfamily protein (AHRD V3.3 *** AT1G05020.1) 1 sly-miR9472-5p Solyc02g069640.3.1 3.0 14.138 1 21 2240 2260 UUUCAGUAGACGUUGUGAAUA AAUUUGUAACGGCUACUGAGA Translation gamma-soluble NSF attachment protein (AHRD V3.3 *-* AT4G20410.1) 1 sly-miR9472-5p Solyc06g069000.3.1 3.0 14.269 1 21 383 403 UUUCAGUAGACGUUGUGAAUA AAUACUCAAUGUCUGCUGAAA Cleavage Uncharacterized GPI-anchored protein At4g28100 (AHRD V1 ***- UGPI7_ARATH) 1 sly-miR9472-5p Solyc01g080670.3.1 3.0 17.611 1 21 1052 1072 UUUCAGUAGACGUUGUGAAUA CGUCCAAAACGUCUGCUGAAA Cleavage Squamosa promoter binding protein 7 1 sly-miR9473-3p Solyc04g082600.3.1 3.0 17.763 1 21 2713 2733 AAACGAGUUCAGAUUUACAGC UUUGUAAAUUUGAAUUUGUUG Cleavage Protein phosphatase 2C family protein (AHRD V3.3 *** AT2G33700.1) 1 sly-miR9473-3p Solyc02g071560.3.1 3.0 16.064 1 21 2531 2552 AAACGAGUUCA-GAUUUACAGC GCAGUAGAUCCUGGACUCGUUU Translation Subtilisin-like protease (AHRD V3.3 *** A0A0B0Q303_GOSAR) 1 sly-miR9473-3p Solyc09g090650.3.1 3.0 18.31 1 21 359 379 AAACGAGUUCAGAUUUACAGC UUUGUGAAUCUGAACUUUUUU Cleavage CCT motif protein (AHRD V3.3 *** A0A072VLD7_MEDTR) 1 sly-miR9473-3p Solyc08g074260.3.1 3.0 13.81 1 21 963 983 AAACGAGUUCAGAUUUACAGC GCAGUAAUUCUGGACUUGUUU Cleavage Cytochrome P450 (AHRD V3.3 *** Q9M7M3_CAPAN) 1 sly-miR9473-3p Solyc11g013880.1.1 3.0 18.556 1 21 577 598 AA-ACGAGUUCAGAUUUACAGC UCUGUAAAUGUGAACUUGUCUU Cleavage Serine/threonine-protein kinase (AHRD V3.3 *** K4D6J2_SOLLC) 1 sly-miR9473-3p Solyc01g067070.3.1 3.0 17.14 1 21 1403 1424 AAACGAGUUCAGAUUUA-CAGC CCUGAUAAUUUUGAGCUCGUUU Cleavage Mitochondrial substrate carrier family protein (AHRD V3.3 *** AT5G48970.1) 1 sly-miR9473-3p Solyc12g056340.2.1 3.0 10.001 1 21 2844 2865 AAACGAGUUC-AGAUUUACAGC ACUUUAAAUUUCGAAUUCGUUU Translation RNA helicase DEAD38 1 sly-miR9473-3p Solyc06g073710.3.1 3.0 15.93 1 21 2203 2224 AAACGAGUUCAG-AUUUACAGC AUUUUAAAUUCUGAGCUCGUUU Cleavage Glucan endo-1,3-beta-glucosidase 14 (AHRD V3.3 *** A0A151SPX1_CAJCA) 1 sly-miR9473-3p Solyc02g068250.3.1 3.0 12.368 1 21 880 900 AAACGAGUUCAGAUUUACAGC ACUUUAAAUUUGUACUUGUUU Translation microspore-specific promoter 2 (AHRD V3.3 *-* AT5G46795.1) 1 sly-miR9473-3p Solyc10g079300.2.1 3.0 19.978 1 21 397 417 AAACGAGUUCAGAUUUACAGC UUUGAAAAUUUUAACUCGUUU Translation Calcium-transporting ATPase (AHRD V3.3 *** M1AEH1_SOLTU) 1 sly-miR9473-5p Solyc05g045923.1.1 3.0 23.832 1 21 265 285 UGGCUGUAAAUCUAAACUCGU ACGAGUUUGGAUGAACAGUCA Translation Cytochrome c oxidase subunit 2 (AHRD V3.3 *** A0A0C5B2A3_HYONI) 1 sly-miR9473-5p Solyc03g026190.3.1 3.0 20.104 1 21 2366 2386 UGGCUGUAAAUCUAAACUCGU AAGAGUUUGGAGUUACAGUCA Translation Transcriptional corepressor SEUSS-like protein (AHRD V3.3 *** A0A0B0MRC0_GOSAR) 1 sly-miR9473-5p Solyc08g077850.2.1 3.0 15.918 1 21 63 84 UGGCUGUAAA-UCUAAACUCGU CUGAGUUUAGGGUUUAUAGUCA Translation tRNA/rRNA methyltransferase family protein (AHRD V3.3 *** D7M9H6_ARALL) 1 sly-miR9473-5p Solyc10g006330.3.1 3.0 12.908 1 21 894 914 UGGCUGUAAAUCUAAACUCGU UGGAGUUGGGAUUUAUAGCCA Cleavage Plastid movement impaired protein (AHRD V3.3 *** G7LD87_MEDTR) 1 sly-miR9473-5p Solyc04g080480.1.1 3.0 17.663 1 21 663 684 UGGCUGUAAAUC-UAAACUCGU GAGAGCUUAUGAUUUACAGCCA Cleavage 4-coumarate--CoA ligase-like 4 (AHRD V3.3 *** 4CLL4_ARATH) 1 sly-miR9474-3p Solyc04g005865.1.1 3.0 15.818 1 22 190 211 UUUUGUUCGCAGAUACUACAGU UUUGUGGUAUUUGUGGAUAGAA Cleavage Kelch repeat-containing F-box family protein (AHRD V3.3 --* D7KS27_ARALL) 1 sly-miR9474-3p Solyc02g077230.3.1 3.0 16.12 1 22 1066 1087 UUUUGUUCGCAGAUACUACAGU UGUGUAGUAUUUGAGAAUAAAU Translation alpha/beta-Hydrolases superfamily protein (AHRD V3.3 --* AT2G03140.9) 1 sly-miR9474-3p Solyc02g071350.3.1 3.0 15.174 1 22 4888 4910 UUUUGUUCGCAGAUACU-ACAGU UUUGUCACUAUCUGCGAAUAGAA Cleavage ABC transporter B family protein (AHRD V3.3 *** G7ILW7_MEDTR) 1 sly-miR9474-3p Solyc08g074840.1.1 3.0 15.667 1 22 85 107 UUUUGUUC-GCAGAUACUACAGU AAUGUGGAAUCUGCUGGACAAAA Cleavage LOW QUALITY:Eukaryotic translation initiation factor 3 subunit G (AHRD V3.3 *-* K4CMJ7_SOLLC) 1 sly-miR9474-3p Solyc07g064090.3.1 3.0 20.122 1 22 519 540 UUUUGUUCGCAGAUACUACAGU CUUGUAUUAUCUGCCAGCAAAG Cleavage fertilization-independent endosperm protein 1 sly-miR9474-3p Solyc02g085285.1.1 3.0 13.652 1 22 94 115 UUUUGUUCGCAGAUACUACAGU AGUGCACUAUCUGUGGACAAAA Cleavage Protein with RING/U-box and TRAF-like domain (AHRD V3.3 --* AT1G66660.1) 1 sly-miR9474-3p Solyc02g071365.1.1 3.0 15.783 1 22 1911 1933 UUUUGUUC-GCAGAUACUACAGU UUUGUUGUAUCUGAAGAACAAAA Translation 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (AHRD V3.3 *-* AT4G25300.1) 1 sly-miR9474-3p Solyc03g077920.1.1 3.0 16.459 1 22 682 703 UUUUGUUCGCAGAUACUACAGU GAUGUAGAAUCUCUGGACAAAA Translation C2 calcium/lipid-binding plant phosphoribosyltransferase family protein (AHRD V3.3 *** AT5G06850.1) 1 sly-miR9474-5p Solyc04g077870.3.1 3.0 12.57 1 22 4140 4163 UGUAGAAGU--CAUGAAUAAAAUG GAUUUUAUUUAUGCUGCUUCUACA Translation Calcium-transporting ATPase (AHRD V3.3 *** M1BXT8_SOLTU) 1 sly-miR9474-5p Solyc01g106750.2.1 3.0 12.07 1 22 4124 4147 UGUAGAAGUCAUG-AAU-AAAAUG CAUUUUUAUUACAUGAUUUUUACA Cleavage Transmembrane protein, putative (AHRD V3.3 *** G7JJ78_MEDTR) 1 sly-miR9474-5p Solyc12g049300.2.1 3.0 14.503 1 22 39 61 UGUAGAAGUC-AUGAAUAAAAUG GAUUUUAUUCAUCGAUUUUUACU Translation R2R3MYB transcription factor 54 1 sly-miR9474-5p Solyc01g110290.3.1 3.0 5.422 1 22 32 55 UGUAGAAGUCA-UGAAUAA-AAUG CAUUAUUAUUCAAUAACUUCUACA Translation Squalene synthase (AHRD V3.3 *** D0VFU8_SOLLC) 1 sly-miR9474-5p Solyc08g078640.2.1 3.0 10.114 1 22 2889 2911 UGUAGAAGUCAUGA-AUAAAAUG AAUUUUAUAUUGUGGCUUUUACA Cleavage Pectinesterase (AHRD V3.3 *** W9SGX5_9ROSA) 1 sly-miR9474-5p Solyc06g062390.3.1 3.0 11.895 1 22 1073 1094 UGUAGAAGUCAUGAAUAAAAUG AUUUUUAUUUAUGAUUUCUUUA Cleavage Acid phosphatase-like protein 1 (AHRD V3.3 *** V9MHL3_9ROSA) 1 sly-miR9474-5p Solyc03g098630.3.1 3.0 14.494 1 22 5455 5477 UGUAGAAGUCAUGAAUA-AAAUG CCUUUGUAUUCAUGACUUUUCCA Cleavage DUF789 family protein (AHRD V3.3 *-* G7KKC4_MEDTR) 1 sly-miR9475-3p Solyc08g065537.1.1 3.0 17.059 1 21 193 213 CUACAAUGUAGAGAUCGUUUU AAAAUGACCUUUAUAUUGUGG Cleavage LOW QUALITY:RNA-directed DNA polymerase (reverse transcriptase)-related family protein (AHRD V3.3 --* AT2G02520.1) 1 sly-miR9475-3p Solyc09g092470.2.1 3.0 17.684 1 21 359 379 CUACAAUGUAGAGAUCGUUUU AUAACGAUCUUUACAUUGUUG Cleavage sesquiterpene synthase 14 1 sly-miR9475-3p Solyc03g006900.2.1 3.0 19.14 1 21 3277 3297 CUACAAUGUAGAGAUCGUUUU GAACCGAUCUCUACACUGUGG Cleavage Kinase superfamily protein isoform 1 (AHRD V3.3 *** A0A061G7K8_THECC) 1 sly-miR9475-3p Solyc05g007930.3.1 3.0 12.219 1 21 2523 2543 CUACAAUGUAGAGAUCGUUUU UAAACGAGCUUUAUGUUGUGG Cleavage Beta-1,3-galactosyltransferase-like protein (AHRD V3.3 *** G7KFC0_MEDTR) 1 sly-miR9475-3p Solyc02g084720.3.1 3.0 22.336 1 21 4412 4432 CUACAAUGUAGAGAUCGUUUU GGAAUAUUCUCUACAUUGUAG Cleavage beta-galactosidase 6 1 sly-miR9475-5p Solyc08g007700.1.1 3.0 22.787 1 21 2020 2040 AACGAUCUCUACAUUGUAGGC UCUUACAGUGUGGAGAUAGUU Cleavage Subtilisin-like protease (AHRD V3.3 *** Q9LWA3_SOLLC) 1 sly-miR9476-3p Solyc04g058140.3.1 3.0 15.917 1 21 1611 1631 AAAAAGAUGCAGGACUAGACC UAUCUAGUCUUGUAUCUUUUC Cleavage GTPase obg (AHRD V3.3 *** A0A1D1XZG9_9ARAE) 1 sly-miR9476-3p Solyc02g069370.3.1 3.0 17.221 1 21 275 295 AAAAAGAUGCAGGACUAGACC AGUCUAGUUCUGCGUUUUGUU Cleavage Ras-related GTP-binding protein (AHRD V3.3 *** Q40570_TOBAC) 1 sly-miR9476-3p Solyc08g067820.3.1 3.0 23.318 1 21 1378 1399 AAAAAGAU-GCAGGACUAGACC UGUUUGGUCCUGUUAUUUUUUU Cleavage RNA-binding 48 (AHRD V3.3 *** A0A0B0P6M7_GOSAR) 1 sly-miR9476-3p Solyc07g025170.3.1 3.0 14.256 1 21 3467 3487 AAAAAGAUGCAGGACUAGACC ACUCUAGUUUUGCUUCUUUUU Cleavage exocyst complex component sec3A (AHRD V3.3 *** AT1G47550.2) 1 sly-miR9476-3p Solyc05g054580.3.1 3.0 15.475 1 21 1432 1452 AAAAAGAUGCAGGACUAGACC UGUUUAGACUUGAAUCUUUUU Translation 60S acidic ribosomal protein P0 (AHRD V3.3 *** K4C2D6_SOLLC) 1 sly-miR9476-3p Solyc03g019670.3.1 3.0 7.661 1 21 84 105 AAAAAGAUGCAGGA-CUAGACC UGUCUAGAUCCUUCCUCUUUUU Translation Non-hemolytic phospholipase C (AHRD V3.3 *** A0A0B2RKR1_GLYSO) 1 sly-miR9476-5p Solyc02g082660.3.1 3.0 20.121 1 21 1202 1223 UCU-AGUCCUGCAUCUUUUUUU AAAAAGAGGUGCAGGGCUCAGA Cleavage DNA mismatch repair protein mutL (AHRD V3.3 *-* A0A151THR9_CAJCA) 1 sly-miR9476-5p Solyc03g079893.1.1 3.0 13.174 1 21 357 377 UCUAGUCCUGCAUCUUUUUUU AGAGGAGGAUGCAGGGCUGGA Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A151SSW9_CAJCA) 1 sly-miR9476-5p Solyc01g067360.3.1 3.0 14.321 1 21 250 270 UCUAGUCCUGCAUCUUUUUUU AGGAGAAGAUGCAAGAUUAGA Cleavage CHY-type/CTCHY-type/RING-type Zinc finger protein (AHRD V3.3 *** AT5G18650.1) 1 sly-miR9476-5p Solyc08g013730.3.1 3.0 15.164 1 21 1501 1522 UCUAGUCCUGCAUCUUU-UUUU AAAAUAAAGGUGGAGGACUAGG Translation NOD26-like intrinsic protein5.1 1 sly-miR9476-5p Solyc01g101020.3.1 3.0 20.287 1 21 1775 1796 UCUAGUCCUG-CAUCUUUUUUU UAAAAAAGAUGACGGGACUGGU Translation FACT complex subunit SPT16, putative (AHRD V3.3 *** B9RFP6_RICCO) 1 sly-miR9476-5p Solyc02g065220.3.1 3.0 24.947 1 21 928 948 UCUAGUCCUGCAUCUUUUUUU CAAAAAAGAUGCAGGAGUUGA Cleavage Cytochrome P450 (AHRD V3.3 *** A0A103Y530_CYNCS) 1 sly-miR9476-5p Solyc03g094123.1.1 3.0 9.417 1 21 15 35 UCUAGUCCUGCAUCUUUUUUU GAAAAAACAUGUAGGACUACA Cleavage Retrovirus-related Pol polyprotein from transposon TNT 1-94 (AHRD V3.3 *-* A0A1D1YY40_9ARAE) 1 sly-miR9476-5p Solyc07g055270.1.1 3.0 17.784 1 21 566 586 UCUAGUCCUGCAUCUUUUUUU AGAAAAAAAUGGAGGACUGGA Translation LOW QUALITY:DUF1685 family protein (AHRD V3.3 *** G7IM74_MEDTR) 1 sly-miR9476-5p Solyc02g080860.2.1 3.0 17.064 1 21 1183 1204 UCUAGUCCUG-CAUCUUUUUUU CAAAGAAGAUGAUGGGAUUAGA Translation MYB transcription factor-like (AHRD V3.3 *-* A0A0K9PMY6_ZOSMR) 1 sly-miR9476-5p Solyc01g008490.3.1 3.0 17.401 1 21 698 718 UCUAGUCCUGCAUCUUUUUUU AAAAAAAGGACUAGGACUAGA Translation Nuclear transcription factor Y subunit (AHRD V3.3 *-* A0A0K9P8V1_ZOSMR) 1 sly-miR9476-5p Solyc12g096660.2.1 3.0 23.919 1 21 2592 2612 UCUAGUCCUGCAUCUUUUUUU AAAAGAAACUGUAGGACUAGA Cleavage Type II inositol 5-phosphatase, putative (AHRD V3.3 *** B9RM01_RICCO) 1 sly-miR9476-5p Solyc04g007420.3.1 3.0 11.726 1 21 1452 1473 UCUAGU-CCUGCAUCUUUUUUU CGAAAAAGAUGAAGGUACUAGA Translation basic helix-loop-helix (bHLH) DNA-binding superfamily protein (AHRD V3.3 *-* AT4G28800.1) 1 sly-miR9476-5p Solyc11g065720.2.1 3.0 20.766 1 21 1625 1645 UCUAGUCCUGCAUCUUUUUUU AGAAAAAGAAGGGGGACUAGA Translation ABC transporter-like family-protein (AHRD V3.3 *** A0A072VNR4_MEDTR) 1 sly-miR9476-5p Solyc01g086890.3.1 3.0 17.839 1 21 1598 1618 UCUAGUCCUGCAUCUUUUUUU GAGAGAAGGUGAAGGACUAGG Translation G-patch domain-containing protein (AHRD V3.3 *** A0A103XTL2_CYNCS) 1 sly-miR9476-5p Solyc05g023710.3.1 3.0 20.926 1 21 956 976 UCUAGUCCUGCAUCUUUUUUU CAAGAAAGAAGCAGUACUAGA Cleavage Nucleolar complex protein 2 isoform 2 (AHRD V3.3 *** A0A061FUS6_THECC) 1 sly-miR9476-5p Solyc11g069230.2.1 3.0 11.438 1 21 828 848 UCUAGUCCUGCAUCUUUUUUU GAAACAGGAUGAAGGAUUAGA Translation Syntaxin, putative (AHRD V3.3 *** B9S0N2_RICCO) 1 sly-miR9476-5p Solyc10g085370.2.1 3.0 9.957 1 21 1029 1049 UCUAGUCCUGCAUCUUUUUUU AAAAACAGAUGAUGGACUAGA Translation Protein phosphatase-2c, putative (AHRD V3.3 *** B9SL27_RICCO) 1 sly-miR9477-3p Solyc04g078190.3.1 3.0 18.712 1 24 1359 1383 UUGGGAAAGGG-AACAACUGAUAGU ACGAUCAGUUGUAACCCUUUUCCGA Translation glutamyl-tRNA (Gln) amidotransferase subunit A (DUF620) (AHRD V3.3 *** AT3G19540.1) 1 sly-miR9477-3p Solyc02g082290.3.1 3.0 16.988 1 24 3275 3303 UUGGGAAAGGGAA-CAACUGAU----AGU ACUCUAGAUCAAUUGCUUUCCUUUCCCAG Cleavage MORC family CW-type zinc finger protein 3 (AHRD V3.3 *** A0A1D1ZIG9_9ARAE) 1 sly-miR9477-5p Solyc02g066980.1.1 3.0 16.773 1 24 1140 1167 UAUCCGUUG-UUC-CCUUUUCCU--ACC GGUGGAGGAAGAGGAGAAACAGCGGAUA Translation LOW QUALITY:TPX2 (targeting protein for Xklp2) protein family (AHRD V3.3 *** AT5G15510.1) 1 sly-miR9477-5p Solyc06g008710.2.1 3.0 18.675 1 24 1090 1113 UAUCCGUUGUUCCCUUUUCCUACC UGUUGGGAGAGGGAAGAGCGGAUG Translation Cullin 1 (AHRD V3.3 *** A0A0D4D5H0_SOLLC) 1 sly-miR9477-5p Solyc01g009090.3.1 3.0 16.241 1 24 1240 1263 UAUCCGUUGUUCCCUUUUCCUACC ACUCGGAGAAGGGAAUAGAGGAUA Cleavage Serrate RNA effector molecule-like protein (AHRD V3.3 *** A0A0B0MH79_GOSAR) 1 sly-miR9477-5p Solyc08g065990.3.1 3.0 20.143 1 24 553 576 UAUCCGUUGUUCCCUUUUCCUACC AUUUGGAAAAGGGAAGGACGGUUA Translation cytosolic Fe-S cluster assembly factor nar1 1 sly-miR9478-3p Solyc11g020478.1.1 3.0 15.772 1 21 52 72 UUCGAUGACAUAUUUGAGCCU CGGCUCAAGUAUGUUGUUGAU Cleavage Disease resistance protein (AHRD V3.3 *-* A0A118JXS4_CYNCS) 1 sly-miR9478-3p Solyc06g083690.3.1 3.0 6.32 1 21 3366 3386 UUCGAUGACAUAUUUGAGCCU CGGCUUAAAUAUACCAUUGAA Translation Glutaredoxin family protein (AHRD V3.3 *** AT4G28730.1) 1 sly-miR9478-5p Solyc09g005910.3.1 3.0 20.897 1 22 503 524 GCUUAAAUAUGUAGAUCGAACU UCUUCCAUUUGCAUAUUUAAGG Cleavage Phosphatidate phosphatase LPIN2-like protein (AHRD V3.3 *** A0A0B2PEL3_GLYSO) 1 sly-miR9478-5p Solyc07g043510.3.1 3.0 13.107 1 22 1725 1746 GCUUAAAUAUGUAGAUCGAACU UCUUCGGGCUAUAUGUUUGAGC Cleavage OTU domain-containing (AHRD V3.3 *** A0A0B0PSP5_GOSAR) 1 sly-miR9478-5p Solyc06g063330.3.1 3.0 17.179 1 22 2417 2438 GCUUAAAUAUGUAGAUCGAACU GAUUUGACCUGCAAAUUUAAGC Translation vacuolar ATP synthase subunit A (AHRD V3.3 *** AT1G78900.2) 1 sly-miR9479-3p Solyc02g090620.3.1 3.0 19.804 1 22 959 980 GAGAAUGGUAGAGGGUCGGACC UGUUCGGCGCUUUGCCAUUCUC Cleavage Sulfotransferase (AHRD V3.3 *** K4BCL1_SOLLC) 1 sly-miR9479-3p Solyc02g068560.3.1 3.0 19.048 1 22 7399 7420 GAGAAUGGUAGAGGGUCGGACC CCUCUGACCCUCCAUUGUUCUC Translation CHD3-type chromatin-remodeling factor PICKLE (AHRD V3.3 *** A0A142CD29_9LAMI) 1 sly-miR9479-3p Solyc05g054250.1.1 3.0 14.989 1 22 838 860 GAGAAUGGUAGAGG-GUCGGACC UAUCAGGCACCUCUGCCAUUCUC Cleavage LOW QUALITY:Heavy metal transport/detoxification superfamily protein (AHRD V3.3 *-* AT5G19090.5) 1 sly-miR9479-3p Solyc03g121270.3.1 3.0 8.821 1 22 39 61 GAGAAUGG-UAGAGGGUCGGACC AAUUGGACCCUCUAUCCAUUUUC Cleavage IAA-amino acid hydrolase ILR1, putative (AHRD V3.3 *** B9RQ74_RICCO) 1