GEO_accession GEO_ID sample_ID data_type tissue age control(0)/treatment(1) stimulus genotype title sequencer GSE134050 GSM3934472 SRR8659974 single-end seedling 10 days 0 mock treated Williams 82 Genome-Wide transcriptional profiling elucidating the effects of Brassinosteroid in Glycine max during early vegetative development Illumina HiSeq 2000 GSE129509 GSM3714641 SRR8868860 single-end nodule emerging 0 Emerging nodules Williams 82 Treanscriptomes of emering nodules, mature nodules, emerging lateral roots, and young lateral roots in soybean Illumina HiSeq 2000 GSE129509 GSM3714644 SRR8868863 single-end root 5-7 days after germination 0 Root segment above and below emerging nodules Williams 82 Treanscriptomes of emering nodules, mature nodules, emerging lateral roots, and young lateral roots in soybean Illumina HiSeq 2000 GSE129509 GSM3714653 SRR8868872 single-end lateral_root emerging 0 Emerging lateral roots Williams 82 Treanscriptomes of emering nodules, mature nodules, emerging lateral roots, and young lateral roots in soybean Illumina HiSeq 2000 GSE111799 GSM3039920 SRR6831048 paired-end leaf 20 days after germination 0 Zn sufficient Williams 82 Transcriptomic study of soybean (Glycine max) in response to zinc deficiency Illumina HiSeq 2000 GSE117686 GSM3307252 SRR7601335 paired-end unifoliolate_leaf 2 weeks 0 cold treatment 0 hour Williams 82 RNAseq data of two week-old soybean leaves response to cold stress Illumina HiSeq 2000 GSE99571 GSM2646604 SRR5639237 single-end embryo developmental stage: cotyledon 0 Soybean Cotyledon-stage Embryo Williams 82 Gene Expression Changes during embryo and seed maturation, quiescence and germination in soybean Illumina HiSeq 2000 GSE99571 GSM2646616 SRR5639249 single-end seed developmental stage: mature, dry seed 0 Soybean Dry Seed Williams 82 Gene Expression Changes during embryo and seed maturation, quiescence and germination in soybean Illumina HiSeq 2000 GSE99109 GSM2633525 SRR5579276 single-end embryo_axis 4 weeks 0 Soybean Mid-Maturation Embryo Axis Williams 82 Gene Expression Changes in the Development of the Soybean Seed Mid-Maturation (B1) Stage Illumina HiSeq 2000 GSE99109 GSM2633528 SRR5579279 single-end cotyledon 4 weeks 0 Soybean Mid-Maturation Embryo Cotyledons Williams 82 Gene Expression Changes in the Development of the Soybean Seed Mid-Maturation (B1) Stage Illumina HiSeq 2000 GSE99109 GSM2633531 SRR5579282 single-end seed_coat 4 weeks 0 Soybean Mid-Maturation Seed Coat Williams 82 Gene Expression Changes in the Development of the Soybean Seed Mid-Maturation (B1) Stage Illumina HiSeq 2000 GSE82240 GSM2187002 SRR3624077 paired-end stem none 0 infection: mock-inoculated Williams 82 Fine mapping and candidate gene analysis of two loci conferring resistance to Phytophthora sojae in soybean Illumina HiScanSQ GSE64665 GSM1576581 SRR1740419 single-end root_meristematic_zone 4 days after plating 0 GmMZ1,root zone: Root meristematic zone Williams 82 Conserved Molecular Program for Root Development in Diverse Plants Illumina HiSeq 2000 Seeds were sterilized and germinated on agarose-solidified MS media under constant light at 21C. GSE64665 GSM1576584 SRR1740422 single-end root_elongation_zone 4 days after plating 0 GmEZ1,root zone: Root elongation zone Williams 82 Conserved Molecular Program for Root Development in Diverse Plants Illumina HiSeq 2000 GSE64665 GSM1576587 SRR1740425 single-end root_differentiation_zone 4 days after plating 0 GmDZ1,root zone: Root differentiation zone Williams 82 Conserved Molecular Program for Root Development in Diverse Plants Illumina HiSeq 2000 GSE57606 GSM1385459 SRR1284522 single-end endosperm seeds ranging 3.0-3.5mm in length 0 Soybean Cotyledon Stage Endosperm-Biological replicate 1 Williams 82 Gene Expression Changes in the Development of the Soybean Seed-Cotyledon Stage Illumina HiSeq 2000 GSE57606 GSM1385477 SRR1284548 single-end suspensor seeds ranging 3.0-3.5mm in length 0 Soybean Cotyledon Stage Suspensor-Biological replicate 1 Williams 82 Gene Expression Changes in the Development of the Soybean Seed-Cotyledon Stage Illumina HiSeq 2000 GSE46096 GSM1398255 SRR1298607 single-end plumule None 0 Soybean Early Maturation Axis Plumules- biological replicate 1 Williams 82 Gene Expression Changes in the Development of the Soybean Seed-Early Maturation Stage Illumina HiSeq 2000 GSE131686 GSM3813939 SRR9113321 paired-end root_hair H2O treatment 24h 0 H2O treatment 24h Williams 82 Glyceollin transcription factor GmMYB29A2 is a regulator of soybean resistance to Phytophthora sojae Illumina HiSeq 1500 GSE150157 GSM4525225 SRR11741785 single-end flower None 0 flower None Characterization of RNAs in soybean (Glycine max) Illumina HiSeq 2500 GSE150157 GSM4525235 SRR11741795 single-end anther None 0 anther, rep 1 None Characterization of RNAs in soybean (Glycine max) Illumina HiSeq 2500 GSE150157 GSM4525236 SRR11741796 single-end ovary None 0 ovary, rep 1 None Characterization of RNAs in soybean (Glycine max) Illumina HiSeq 2500 GSE94228 GSM2471308 SRR5210841 paired-end unifoliolate_leaf 11-day old 0 ZT0_rep1 Williams 82 Circadian transcriptome of soybean unifoliolate leaves Illumina HiSeq 4000 GSE29163 GSM721733 SRR203366 single-end flower_bud None 0 Floral buds Williams 82 Genome-Wide Transcript Profiling During Soybean Seed Development and Throughout the Soybean Life Cycle Illumina HiSeq 2000 GSE46096 GSM1123218 SRR827681 single-end root_tip seeds ranging 6.0-7.0mm in length 0 Soybean Early Maturation Root Tip-Biological replicate 2 Williams 82 Gene Expression Changes in the Development of the Soybean Seed-Early Maturation Stage Illumina HiSeq 2000