RTFRD: Rice Transcription Factor Regulation Database


TCP Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g11550.1TCP family transcription factor, putative, expressedLOC_Os01g11550TCP
LOC_Os01g55750.1TCP family transcription factor, putative, expressedLOC_Os01g55750TCP
LOC_Os01g55750.2TCP family transcription factor, putative, expressedLOC_Os01g55750TCP
LOC_Os01g55750.3TCP family transcription factor, putative, expressedLOC_Os01g55750TCP
LOC_Os01g69980.1TCP family transcription factor, putative, expressedLOC_Os01g69980TCP
LOC_Os02g42380.1TCP family transcription factor, putative, expressedLOC_Os02g42380TCP
LOC_Os02g51280.1TCP-domain protein, putative, expressedLOC_Os02g51280TCP
LOC_Os02g51310.1TCP family transcription factor, putative, expressedLOC_Os02g51310TCP
LOC_Os03g49880.1TCP family transcription factor, putative, expressedLOC_Os03g49880TCP
LOC_Os03g57190.1TCP family transcription factor, putative, expressedLOC_Os03g57190TCP
LOC_Os04g11830.1TCP family transcription factor, putative, expressedLOC_Os04g11830TCP
LOC_Os04g44440.1TCP family transcription factor, putative, expressedLOC_Os04g44440TCP
LOC_Os05g43760.1TCP family transcription factor, putative, expressedLOC_Os05g43760TCP
LOC_Os06g12230.1TCP-domain protein, putative, expressedLOC_Os06g12230TCP
LOC_Os07g05720.1TCP family transcription factor, putative, expressedLOC_Os07g05720TCP
LOC_Os08g33530.1TCP family transcription factor, putative, expressedLOC_Os08g33530TCP
LOC_Os08g43160.1TCP family transcription factor, putative, expressedLOC_Os08g43160TCP
LOC_Os09g24480.1TCP family transcription factor, putative, expressedLOC_Os09g24480TCP
LOC_Os09g34950.1TCP family transcription factor, putative, expressedLOC_Os09g34950TCP
LOC_Os11g07460.1TCP family transcription factor, putative, expressedLOC_Os11g07460TCP
LOC_Os12g02090.1TCP family transcription factor, putative, expressedLOC_Os12g02090TCP
LOC_Os12g07480.1TCP family transcription factor, putative, expressedLOC_Os12g07480TCP
LOC_Os12g42190.1transposon protein, putative, unclassified, expressedLOC_Os12g42190TCP