RTFRD: Rice Transcription Factor Regulation Database

Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

	A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
	In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
	In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blank	No TF binding Motifs (e-value > 1e-4)

TF id	TF annotation	Gene id	Family
LOC_Os02g53620.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os02g53620	NF-YA
LOC_Os03g07880.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g07880	NF-YA
LOC_Os03g07880.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g07880	NF-YA
LOC_Os03g07880.3	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g07880	NF-YA
LOC_Os03g29760.3	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g29760	NF-YA
LOC_Os03g29760.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g29760	NF-YA
LOC_Os03g29760.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g29760	NF-YA
LOC_Os03g44540.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g44540	NF-YA
LOC_Os03g48970.4	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g48970	NF-YA
LOC_Os03g48970.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g48970	NF-YA
LOC_Os03g48970.3	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g48970	NF-YA
LOC_Os03g48970.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os03g48970	NF-YA
LOC_Os07g06470.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os07g06470	NF-YA
LOC_Os07g06470.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os07g06470	NF-YA
LOC_Os07g41720.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os07g41720	NF-YA
LOC_Os07g41720.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os07g41720	NF-YA
LOC_Os08g09690.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os08g09690	NF-YA
LOC_Os08g09690.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os08g09690	NF-YA
LOC_Os10g25850.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os10g25850	NF-YA
LOC_Os12g41880.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g41880	NF-YA
LOC_Os12g41880.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g41880	NF-YA
LOC_Os12g42400.1	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g42400	NF-YA
LOC_Os12g42400.3	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g42400	NF-YA
LOC_Os12g42400.2	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g42400	NF-YA
LOC_Os12g42400.4	nuclear transcription factor Y subunit, putative, expressed	LOC_Os12g42400	NF-YA

TF id

TF annotation

Motif Confidence

Gene id

Family

Detail

LOC_Os02g53620.1