RTFRD: Rice Transcription Factor Regulation Database


MIKC_MADS Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g10504.2OsMADS3 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g10504MIKC_MADS
LOC_Os01g10504.1OsMADS3 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g10504MIKC_MADS
LOC_Os01g10504.3OsMADS3 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g10504MIKC_MADS
LOC_Os01g52680.1OsMADS32 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g52680MIKC_MADS
LOC_Os01g66030.1OsMADS2 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g66030MIKC_MADS
LOC_Os01g66030.2OsMADS2 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g66030MIKC_MADS
LOC_Os01g66290.1OsMADS21 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g66290MIKC_MADS
LOC_Os01g66290.2OsMADS21 - MADS-box family gene with MIKCc type-box, expressedLOC_Os01g66290MIKC_MADS
LOC_Os02g01365.1expressed proteinLOC_Os02g01365MIKC_MADS
LOC_Os02g01355.1MADS-box transcription factor, putative, expressedLOC_Os02g01355MIKC_MADS
LOC_Os02g07430.1OsMADS29 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g07430MIKC_MADS
LOC_Os02g36924.1OsMADS27 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g36924MIKC_MADS
LOC_Os02g45770.1OsMADS6 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g45770MIKC_MADS
LOC_Os02g49840.1OsMADS57 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g49840MIKC_MADS
LOC_Os02g49840.2OsMADS57 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g49840MIKC_MADS
LOC_Os02g49840.4OsMADS57 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g49840MIKC_MADS
LOC_Os02g52340.1OsMADS22 - MADS-box family gene with MIKCc type-box, expressedLOC_Os02g52340MIKC_MADS
LOC_Os03g08754.1OsMADS47 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g08754MIKC_MADS
LOC_Os03g08754.2OsMADS47 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g08754MIKC_MADS
LOC_Os03g11614.1OsMADS1 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g11614MIKC_MADS
LOC_Os03g54160.2OsMADS14 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g54160MIKC_MADS
LOC_Os03g54160.1OsMADS14 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g54160MIKC_MADS
LOC_Os03g54170.1OsMADS34 - MADS-box family gene with MIKCc type-box, expressedLOC_Os03g54170MIKC_MADS
LOC_Os04g23910.1OsMADS25 - MADS-box family gene with MIKCc type-box, expressedLOC_Os04g23910MIKC_MADS
LOC_Os04g49150.1OsMADS17 - MADS-box family gene with MIKCc type-box, expressedLOC_Os04g49150MIKC_MADS
LOC_Os04g52410.1OsMADS31 - MADS-box family gene with MIKCc type-box, expressedLOC_Os04g52410MIKC_MADS
LOC_Os04g52410.2OsMADS31 - MADS-box family gene with MIKCc type-box, expressedLOC_Os04g52410MIKC_MADS
LOC_Os05g11380.1OsMADS66 - MADS-box family gene with MIKCc type-box, expressedLOC_Os05g11380MIKC_MADS
LOC_Os05g11414.1OsMADS58 - MADS-box family gene with MIKCc type-box, expressedLOC_Os05g11414MIKC_MADS
LOC_Os05g34940.2OsMADS4 - MADS-box family gene with MIKCc type-box, expressedLOC_Os05g34940MIKC_MADS
LOC_Os05g34940.3OsMADS4 - MADS-box family gene with MIKCc type-box, expressedLOC_Os05g34940MIKC_MADS
LOC_Os05g34940.1OsMADS4 - MADS-box family gene with MIKCc type-box, expressedLOC_Os05g34940MIKC_MADS
LOC_Os06g01890.1MADS-box transcription factor, putative, expressedLOC_Os06g01890MIKC_MADS
LOC_Os06g06750.1OsMADS5 - MADS-box family gene with MIKCc type-box, expressedLOC_Os06g06750MIKC_MADS
LOC_Os06g11330.1OsMADS55 - MADS-box family gene with MIKCc type-box, expressedLOC_Os06g11330MIKC_MADS
LOC_Os06g45650.1OsMADS30 - MADS-box family gene with MIKCc type-box, expressedLOC_Os06g45650MIKC_MADS
LOC_Os06g49840.2OsMADS16 - MADS-box family gene with MIKCc type-box, expressedLOC_Os06g49840MIKC_MADS
LOC_Os06g49840.1OsMADS16 - MADS-box family gene with MIKCc type-box, expressedLOC_Os06g49840MIKC_MADS
LOC_Os07g01820.4OsMADS15 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g01820MIKC_MADS
LOC_Os07g01820.2OsMADS15 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g01820MIKC_MADS
LOC_Os07g01820.1OsMADS15 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g01820MIKC_MADS
LOC_Os07g01820.3OsMADS15 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g01820MIKC_MADS
LOC_Os07g01820.6OsMADS15 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g01820MIKC_MADS
LOC_Os07g41370.1OsMADS18 - MADS-box family gene with MIKCc type-box, expressedLOC_Os07g41370MIKC_MADS
LOC_Os08g02070.1OsMADS26 - MADS-box family gene with MIKCc type-box, expressedLOC_Os08g02070MIKC_MADS
LOC_Os08g33488.1OsMADS23 - MADS-box family gene with MIKCc type-box, expressedLOC_Os08g33488MIKC_MADS
LOC_Os08g41950.1OsMADS7 - MADS-box family gene with MIKCc type-box, expressedLOC_Os08g41950MIKC_MADS
LOC_Os08g41950.2OsMADS7 - MADS-box family gene with MIKCc type-box, expressedLOC_Os08g41950MIKC_MADS
LOC_Os08g41960.1OsMADS37 - MADS-box family gene with MIKC* type-box, expressedLOC_Os08g41960MIKC_MADS
LOC_Os09g32948.1OsMADS8 - MADS-box family gene with MIKCc type-box, expressedLOC_Os09g32948MIKC_MADS
LOC_Os10g39130.1OsMADS56 - MADS-box family gene with MIKCc type-box, expressedLOC_Os10g39130MIKC_MADS
LOC_Os10g39130.2OsMADS56 - MADS-box family gene with MIKCc type-box, expressedLOC_Os10g39130MIKC_MADS
LOC_Os12g10520.1OsMADS33 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10520MIKC_MADS
LOC_Os12g10520.2OsMADS33 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10520MIKC_MADS
LOC_Os12g10540.2OsMADS13 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10540MIKC_MADS
LOC_Os12g10540.4OsMADS13 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10540MIKC_MADS
LOC_Os12g10540.5OsMADS13 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10540MIKC_MADS
LOC_Os12g10540.1OsMADS13 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10540MIKC_MADS
LOC_Os12g10540.3OsMADS13 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g10540MIKC_MADS
LOC_Os12g31748.2OsMADS20 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g31748MIKC_MADS
LOC_Os12g31748.1OsMADS20 - MADS-box family gene with MIKCc type-box, expressedLOC_Os12g31748MIKC_MADS