RTFRD: Rice Transcription Factor Regulation Database


HD-ZIP Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g45570.1homeobox associated leucine zipper, putative, expressedLOC_Os01g45570HD-ZIP
LOC_Os01g55549.1homeobox and START domains containing protein, putative, expressedLOC_Os01g55549HD-ZIP
LOC_Os01g57890.1Homeobox domain containing protein, expressedLOC_Os01g57890HD-ZIP
LOC_Os01g57890.2Homeobox domain containing protein, expressedLOC_Os01g57890HD-ZIP
LOC_Os02g05640.1homeobox associated leucine zipper, putative, expressedLOC_Os02g05640HD-ZIP
LOC_Os02g35770.1homeobox associated leucine zipper, putative, expressedLOC_Os02g35770HD-ZIP
LOC_Os02g43330.1homeobox associated leucine zipper, putative, expressedLOC_Os02g43330HD-ZIP
LOC_Os02g45250.1homeobox and START domains containing protein, putative, expressedLOC_Os02g45250HD-ZIP
LOC_Os02g49700.1homeobox associated leucine zipper, putative, expressedLOC_Os02g49700HD-ZIP
LOC_Os02g49700.3homeobox associated leucine zipper, putative, expressedLOC_Os02g49700HD-ZIP
LOC_Os02g49700.2homeobox associated leucine zipper, putative, expressedLOC_Os02g49700HD-ZIP
LOC_Os03g01890.1START domain containing protein, expressedLOC_Os03g01890HD-ZIP
LOC_Os03g01890.2START domain containing protein, expressedLOC_Os03g01890HD-ZIP
LOC_Os03g07450.1homeobox associated leucine zipper, putative, expressedLOC_Os03g07450HD-ZIP
LOC_Os03g08960.1homeobox associated leucine zipper, putative, expressedLOC_Os03g08960HD-ZIP
LOC_Os03g10210.1homeobox domain containing protein, expressedLOC_Os03g10210HD-ZIP
LOC_Os03g12860.1homeobox associated leucine zipper, putative, expressedLOC_Os03g12860HD-ZIP
LOC_Os03g43930.1START domain containing protein, expressedLOC_Os03g43930HD-ZIP
LOC_Os03g43930.2START domain containing protein, expressedLOC_Os03g43930HD-ZIP
LOC_Os04g45810.1homeobox associated leucine zipper, putative, expressedLOC_Os04g45810HD-ZIP
LOC_Os04g46350.1homeobox associated leucine zipper, putative, expressedLOC_Os04g46350HD-ZIP
LOC_Os04g48070.1homeobox and START domains containing protein, putative, expressedLOC_Os04g48070HD-ZIP
LOC_Os04g48070.2homeobox and START domains containing protein, putative, expressedLOC_Os04g48070HD-ZIP
LOC_Os04g48070.3homeobox and START domains containing protein, putative, expressedLOC_Os04g48070HD-ZIP
LOC_Os04g53540.4homeobox and START domains containing protein, putative, expressedLOC_Os04g53540HD-ZIP
LOC_Os04g53540.2homeobox and START domains containing protein, putative, expressedLOC_Os04g53540HD-ZIP
LOC_Os04g53540.1homeobox and START domains containing protein, putative, expressedLOC_Os04g53540HD-ZIP
LOC_Os04g53540.3homeobox and START domains containing protein, putative, expressedLOC_Os04g53540HD-ZIP
LOC_Os06g04850.1homeobox associated leucine zipper, putative, expressedLOC_Os06g04850HD-ZIP
LOC_Os06g04870.1homeobox associated leucine zipper, putative, expressedLOC_Os06g04870HD-ZIP
LOC_Os06g10600.1homeobox and START domains containing protein, putative, expressedLOC_Os06g10600HD-ZIP
LOC_Os06g48290.1homeobox associated leucine zipper, putative, expressedLOC_Os06g48290HD-ZIP
LOC_Os07g39320.1homeobox domain containing protein, expressedLOC_Os07g39320HD-ZIP
LOC_Os08g04190.1homeobox and START domains containing protein, putative, expressedLOC_Os08g04190HD-ZIP
LOC_Os08g08820.1homeobox and START domains containing protein, putative, expressedLOC_Os08g08820HD-ZIP
LOC_Os08g08820.2homeobox and START domains containing protein, putative, expressedLOC_Os08g08820HD-ZIP
LOC_Os08g19590.1Homeobox domain containing protein, expressedLOC_Os08g19590HD-ZIP
LOC_Os08g19590.3Homeobox domain containing protein, expressedLOC_Os08g19590HD-ZIP
LOC_Os08g19590.2Homeobox domain containing protein, expressedLOC_Os08g19590HD-ZIP
LOC_Os08g32085.1expressed proteinLOC_Os08g32085HD-ZIP
LOC_Os08g32080.1CPuORF27 - conserved peptide uORF-containing transcript, expressedLOC_Os08g32080HD-ZIP
LOC_Os08g36220.1homeobox associated leucine zipper, putative, expressedLOC_Os08g36220HD-ZIP
LOC_Os08g37580.1homeobox associated leucine zipper, putative, expressedLOC_Os08g37580HD-ZIP
LOC_Os09g21180.1homeobox associated leucine zipper, putative, expressedLOC_Os09g21180HD-ZIP
LOC_Os09g27450.1homeobox associated leucine zipper, putative, expressedLOC_Os09g27450HD-ZIP
LOC_Os09g29460.1homeobox associated leucine zipper, putative, expressedLOC_Os09g29460HD-ZIP
LOC_Os09g35760.1homeobox and START domains containing protein, putative, expressedLOC_Os09g35760HD-ZIP
LOC_Os09g35760.2homeobox and START domains containing protein, putative, expressedLOC_Os09g35760HD-ZIP
LOC_Os09g35910.1homeobox associated leucine zipper, putative, expressedLOC_Os09g35910HD-ZIP
LOC_Os10g01470.1homeobox associated leucine zipper, putative, expressedLOC_Os10g01470HD-ZIP
LOC_Os10g23090.1homeobox associated leucine zipper, putative, expressedLOC_Os10g23090HD-ZIP
LOC_Os10g23090.2homeobox associated leucine zipper, putative, expressedLOC_Os10g23090HD-ZIP
LOC_Os10g26500.1homeobox associated leucine zipper, putative, expressedLOC_Os10g26500HD-ZIP
LOC_Os10g33960.4START domain containing protein, expressedLOC_Os10g33960HD-ZIP
LOC_Os10g33960.1START domain containing protein, expressedLOC_Os10g33960HD-ZIP
LOC_Os10g33960.3START domain containing protein, expressedLOC_Os10g33960HD-ZIP
LOC_Os10g33960.2START domain containing protein, expressedLOC_Os10g33960HD-ZIP
LOC_Os10g41230.1homeobox associated leucine zipper, putative, expressedLOC_Os10g41230HD-ZIP
LOC_Os10g42490.2homeobox and START domains containing protein, putative, expressedLOC_Os10g42490HD-ZIP
LOC_Os10g42490.1homeobox and START domains containing protein, putative, expressedLOC_Os10g42490HD-ZIP
LOC_Os12g41860.1START domain containing protein, expressedLOC_Os12g41860HD-ZIP