RTFRD: Rice Transcription Factor Regulation Database


HB-other Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g48170.1homeobox domain containing protein, expressedLOC_Os01g48170HB-other
LOC_Os01g70810.1homeobox domain containing protein, expressedLOC_Os01g70810HB-other
LOC_Os02g05450.1Homeobox domain containing protein, expressedLOC_Os02g05450HB-other
LOC_Os03g55990.1homeobox domain containing protein, expressedLOC_Os03g55990HB-other
LOC_Os03g55990.2homeobox domain containing protein, expressedLOC_Os03g55990HB-other
LOC_Os03g55990.3homeobox domain containing protein, expressedLOC_Os03g55990HB-other
LOC_Os05g09630.1homeobox domain containing protein, expressedLOC_Os05g09630HB-other
LOC_Os05g09630.2homeobox domain containing protein, expressedLOC_Os05g09630HB-other
LOC_Os05g25600.1transposon protein, putative, unclassified, expressedLOC_Os05g25600HB-other
LOC_Os05g48820.1DDT, putative, expressedLOC_Os05g48820HB-other
LOC_Os05g50130.1homeobox associated leucine zipper family protein, expressedLOC_Os05g50130HB-other
LOC_Os06g29020.2retrotransposon protein, putative, unclassified, expressedLOC_Os06g29020HB-other
LOC_Os06g29020.1retrotransposon protein, putative, unclassified, expressedLOC_Os06g29020HB-other
LOC_Os06g39906.1homeobox domain containing protein, expressedLOC_Os06g39906HB-other
LOC_Os07g24350.1homeobox domain containing protein, expressedLOC_Os07g24350HB-other
LOC_Os08g32990.1DNA-directed RNA polymerase subunit, putative, expressedLOC_Os08g32990HB-other
LOC_Os10g39720.1homeobox domain containing protein, expressedLOC_Os10g39720HB-other