RTFRD: Rice Transcription Factor Regulation Database


FAR1 Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g06852.1transposon protein, putative, unclassified, expressedLOC_Os01g06852FAR1
LOC_Os01g16660.1transposon protein, putative, unclassified, expressedLOC_Os01g16660FAR1
LOC_Os01g16740.1transposon protein, putative, unclassified, expressedLOC_Os01g16740FAR1
LOC_Os01g19050.1transposon protein, putative, unclassified, expressedLOC_Os01g19050FAR1
LOC_Os01g23840.1transposon protein, putative, unclassified, expressedLOC_Os01g23840FAR1
LOC_Os01g63030.1transposon protein, putative, unclassified, expressedLOC_Os01g63030FAR1
LOC_Os01g63380.1transposon protein, putative, unclassified, expressedLOC_Os01g63380FAR1
LOC_Os01g71850.1transposon protein, putative, unclassified, expressedLOC_Os01g71850FAR1
LOC_Os02g01860.1transposon protein, putative, unclassifiedLOC_Os02g01860FAR1
LOC_Os02g01950.1transposon protein, putative, unclassified, expressedLOC_Os02g01950FAR1
LOC_Os02g10840.1transposon protein, putative, unclassified, expressedLOC_Os02g10840FAR1
LOC_Os02g16140.1transposon protein, putative, unclassified, expressedLOC_Os02g16140FAR1
LOC_Os02g16240.1transposon protein, putative, unclassified, expressedLOC_Os02g16240FAR1
LOC_Os02g18370.1transposon protein, putative, unclassified, expressedLOC_Os02g18370FAR1
LOC_Os02g25470.1transposon protein, putative, unclassified, expressedLOC_Os02g25470FAR1
LOC_Os02g26780.1transposon protein, putative, unclassified, expressedLOC_Os02g26780FAR1
LOC_Os02g28180.1transposon protein, putative, unclassified, expressedLOC_Os02g28180FAR1
LOC_Os02g29640.1transposon protein, putative, unclassified, expressedLOC_Os02g29640FAR1
LOC_Os02g31850.1transposon protein, putative, unclassified, expressedLOC_Os02g31850FAR1
LOC_Os02g33750.1transposon protein, putative, unclassified, expressedLOC_Os02g33750FAR1
LOC_Os02g33750.2transposon protein, putative, unclassified, expressedLOC_Os02g33750FAR1
LOC_Os02g34520.1retrotransposon protein, putative, Ty1-copia subclass, expressedLOC_Os02g34520FAR1
LOC_Os02g34590.1transposon protein, putative, unclassified, expressedLOC_Os02g34590FAR1
LOC_Os02g39220.1transposon protein, putative, unclassified, expressedLOC_Os02g39220FAR1
LOC_Os02g39520.1transposon protein, putative, unclassified, expressedLOC_Os02g39520FAR1
LOC_Os02g39520.2transposon protein, putative, unclassified, expressedLOC_Os02g39520FAR1
LOC_Os02g39540.2transposon protein, putative, unclassified, expressedLOC_Os02g39540FAR1
LOC_Os02g39540.1transposon protein, putative, unclassified, expressedLOC_Os02g39540FAR1
LOC_Os02g40950.1transposon protein, putative, unclassified, expressedLOC_Os02g40950FAR1
LOC_Os03g06860.1transposon protein, putative, unclassified, expressedLOC_Os03g06860FAR1
LOC_Os03g08370.1transposon protein, putative, unclassified, expressedLOC_Os03g08370FAR1
LOC_Os03g12490.1transposon protein, putative, unclassified, expressedLOC_Os03g12490FAR1
LOC_Os03g15010.1transposon protein, putative, unclassified, expressedLOC_Os03g15010FAR1
LOC_Os03g15040.2FAR1 family protein, expressedLOC_Os03g15040FAR1
LOC_Os03g15040.1FAR1 family protein, expressedLOC_Os03g15040FAR1
LOC_Os03g21660.1transposon protein, putative, unclassified, expressedLOC_Os03g21660FAR1
LOC_Os03g37920.1transposon protein, putative, unclassified, expressedLOC_Os03g37920FAR1
LOC_Os03g40160.1transposon protein, putative, unclassified, expressedLOC_Os03g40160FAR1
LOC_Os03g41800.1transposon protein, putative, unclassified, expressedLOC_Os03g41800FAR1
LOC_Os03g45300.1transposon protein, putative, unclassified, expressedLOC_Os03g45300FAR1
LOC_Os03g50900.1transposon protein, putative, unclassified, expressedLOC_Os03g50900FAR1
LOC_Os03g56630.2transposon protein, putative, unclassified, expressedLOC_Os03g56630FAR1
LOC_Os03g56630.1transposon protein, putative, unclassified, expressedLOC_Os03g56630FAR1
LOC_Os03g62660.1transposon protein, putative, unclassified, expressedLOC_Os03g62660FAR1
LOC_Os03g62660.2transposon protein, putative, unclassified, expressedLOC_Os03g62660FAR1
LOC_Os04g04400.1FAR1 family protein, expressedLOC_Os04g04400FAR1
LOC_Os04g10860.1transposon protein, putative, unclassified, expressedLOC_Os04g10860FAR1
LOC_Os04g22990.1retrotransposon protein, putative, unclassified, expressedLOC_Os04g22990FAR1
LOC_Os04g25100.1transposon protein, putative, unclassified, expressedLOC_Os04g25100FAR1
LOC_Os04g28580.1transposon protein, putative, unclassified, expressedLOC_Os04g28580FAR1
LOC_Os04g30870.1transposon protein, putative, unclassified, expressedLOC_Os04g30870FAR1
LOC_Os04g36590.1transposon protein, putative, unclassified, expressedLOC_Os04g36590FAR1
LOC_Os04g40060.1transposon protein, putative, unclassified, expressedLOC_Os04g40060FAR1
LOC_Os04g44630.1transposon protein, putative, unclassified, expressedLOC_Os04g44630FAR1
LOC_Os04g49380.1transposon protein, putative, unclassified, expressedLOC_Os04g49380FAR1
LOC_Os04g52560.1transposon protein, putative, unclassified, expressedLOC_Os04g52560FAR1
LOC_Os04g54880.1transposon protein, putative, unclassified, expressedLOC_Os04g54880FAR1
LOC_Os05g03090.1transposon protein, putative, unclassified, expressedLOC_Os05g03090FAR1
LOC_Os05g03800.1transposon protein, putative, unclassified, expressedLOC_Os05g03800FAR1
LOC_Os05g06170.1FAR1 family protein, expressedLOC_Os05g06170FAR1
LOC_Os05g25320.1transposon protein, putative, unclassified, expressedLOC_Os05g25320FAR1
LOC_Os05g30310.1transposon protein, putative, unclassified, expressedLOC_Os05g30310FAR1
LOC_Os05g30720.1transposon protein, putative, unclassified, expressedLOC_Os05g30720FAR1
LOC_Os05g37540.1transposon protein, putative, unclassified, expressedLOC_Os05g37540FAR1
LOC_Os05g39480.1transposon protein, putative, unclassified, expressedLOC_Os05g39480FAR1
LOC_Os05g39790.1transposon protein, putative, unclassified, expressedLOC_Os05g39790FAR1
LOC_Os05g40680.1FAR1 family protein, expressedLOC_Os05g40680FAR1
LOC_Os06g07010.2transposon protein, putative, unclassified, expressedLOC_Os06g07010FAR1
LOC_Os06g07010.1transposon protein, putative, unclassified, expressedLOC_Os06g07010FAR1
LOC_Os06g13740.1transposon protein, putative, unclassified, expressedLOC_Os06g13740FAR1
LOC_Os06g13900.1transposon protein, putative, unclassified, expressedLOC_Os06g13900FAR1
LOC_Os06g25610.1transposon protein, putative, unclassified, expressedLOC_Os06g25610FAR1
LOC_Os06g28150.1transposon protein, putative, unclassified, expressedLOC_Os06g28150FAR1
LOC_Os06g32530.1transposon protein, putative, unclassified, expressedLOC_Os06g32530FAR1
LOC_Os06g36970.1transposon protein, putative, unclassified, expressedLOC_Os06g36970FAR1
LOC_Os06g39090.1transposon protein, putative, unclassified, expressedLOC_Os06g39090FAR1
LOC_Os06g39680.1transposon protein, putative, unclassified, expressedLOC_Os06g39680FAR1
LOC_Os06g42420.1transposon protein, putative, unclassified, expressedLOC_Os06g42420FAR1
LOC_Os06g42520.1transposon protein, putative, unclassified, expressedLOC_Os06g42520FAR1
LOC_Os06g49550.1transposon protein, putative, unclassified, expressedLOC_Os06g49550FAR1
LOC_Os07g01270.1transposon protein, putative, unclassified, expressedLOC_Os07g01270FAR1
LOC_Os07g18840.1transposon protein, putative, unclassified, expressedLOC_Os07g18840FAR1
LOC_Os07g27770.1transposon protein, putative, unclassified, expressedLOC_Os07g27770FAR1
LOC_Os07g27800.1transposon protein, putative, unclassified, expressedLOC_Os07g27800FAR1
LOC_Os07g31400.1transposon protein, putative, unclassified, expressedLOC_Os07g31400FAR1
LOC_Os07g31420.2transposon protein, putative, unclassified, expressedLOC_Os07g31420FAR1
LOC_Os07g31420.1transposon protein, putative, unclassified, expressedLOC_Os07g31420FAR1
LOC_Os07g32110.1transposon protein, putative, unclassified, expressedLOC_Os07g32110FAR1
LOC_Os07g37630.1transposon protein, putative, unclassified, expressedLOC_Os07g37630FAR1
LOC_Os07g42400.1transposon protein, putative, unclassified, expressedLOC_Os07g42400FAR1
LOC_Os07g42400.2transposon protein, putative, unclassified, expressedLOC_Os07g42400FAR1
LOC_Os07g45450.1expressed proteinLOC_Os07g45450FAR1
LOC_Os08g14880.2transposon protein, putative, unclassified, expressedLOC_Os08g14880FAR1
LOC_Os08g14880.1transposon protein, putative, unclassified, expressedLOC_Os08g14880FAR1
LOC_Os08g14880.3transposon protein, putative, unclassified, expressedLOC_Os08g14880FAR1
LOC_Os08g14880.4transposon protein, putative, unclassified, expressedLOC_Os08g14880FAR1
LOC_Os08g15510.1transposon protein, putative, unclassified, expressedLOC_Os08g15510FAR1
LOC_Os08g16370.1transposon protein, putative, unclassified, expressedLOC_Os08g16370FAR1
LOC_Os08g20486.1transposon protein, putative, unclassified, expressedLOC_Os08g20486FAR1
LOC_Os08g25260.1transposon protein, putative, unclassified, expressedLOC_Os08g25260FAR1
LOC_Os08g27740.1transposon protein, putative, unclassified, expressedLOC_Os08g27740FAR1
LOC_Os08g32440.1transposon protein, putative, unclassified, expressedLOC_Os08g32440FAR1
LOC_Os08g33270.1transposon protein, putative, unclassified, expressedLOC_Os08g33270FAR1
LOC_Os09g01780.1transposon protein, putative, unclassified, expressedLOC_Os09g01780FAR1
LOC_Os09g08460.1transposon protein, putative, unclassified, expressedLOC_Os09g08460FAR1
LOC_Os09g11390.1transposon protein, putative, unclassified, expressedLOC_Os09g11390FAR1
LOC_Os09g11870.1transposon protein, putative, unclassified, expressedLOC_Os09g11870FAR1
LOC_Os09g14040.1transposon protein, putative, unclassified, expressedLOC_Os09g14040FAR1
LOC_Os09g23230.1transposon protein, putative, unclassified, expressedLOC_Os09g23230FAR1
LOC_Os09g25510.1transposon protein, putative, unclassified, expressedLOC_Os09g25510FAR1
LOC_Os10g06860.1FAR1 family proteinLOC_Os10g06860FAR1
LOC_Os10g14040.1transposon protein, putative, unclassified, expressedLOC_Os10g14040FAR1
LOC_Os10g19270.1retrotransposon protein, putative, Ty3-gypsy subclass, expressedLOC_Os10g19270FAR1
LOC_Os10g34884.1RIPER7 - Ripening-related family protein precursor, expressedLOC_Os10g34884FAR1
LOC_Os10g42160.1transposon protein, putative, unclassified, expressedLOC_Os10g42160FAR1
LOC_Os11g02964.1FAR1 family protein, expressedLOC_Os11g02964FAR1
LOC_Os11g05340.1transposon protein, putative, unclassified, expressedLOC_Os11g05340FAR1
LOC_Os11g11220.1transposon protein, putative, unclassified, expressedLOC_Os11g11220FAR1
LOC_Os11g12490.1transposon protein, putative, unclassified, expressedLOC_Os11g12490FAR1
LOC_Os11g14020.1transposon protein, putative, unclassified, expressedLOC_Os11g14020FAR1
LOC_Os11g15755.1transposon protein, putative, unclassified, expressedLOC_Os11g15755FAR1
LOC_Os11g17430.1retrotransposon protein, putative, unclassified, expressedLOC_Os11g17430FAR1
LOC_Os11g19030.1FAR1 family protein, expressedLOC_Os11g19030FAR1
LOC_Os11g45530.1transposon protein, putative, unclassified, expressedLOC_Os11g45530FAR1
LOC_Os12g03660.1transposon protein, putative, unclassifiedLOC_Os12g03660FAR1
LOC_Os12g05940.1transposon protein, putative, unclassified, expressedLOC_Os12g05940FAR1
LOC_Os12g06380.1transposon protein, putative, unclassified, expressedLOC_Os12g06380FAR1
LOC_Os12g12380.2transposon protein, putative, unclassified, expressedLOC_Os12g12380FAR1
LOC_Os12g12380.3transposon protein, putative, unclassified, expressedLOC_Os12g12380FAR1
LOC_Os12g12380.1transposon protein, putative, unclassified, expressedLOC_Os12g12380FAR1
LOC_Os12g18910.1transposon protein, putative, unclassified, expressedLOC_Os12g18910FAR1
LOC_Os12g24400.1transposon protein, putative, unclassified, expressedLOC_Os12g24400FAR1
LOC_Os12g32140.1transposon protein, putative, unclassified, expressedLOC_Os12g32140FAR1