RTFRD: Rice Transcription Factor Regulation Database



DBB Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)

TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g10580.1B-box zinc finger family protein, putative, expressedLOC_Os01g10580DBB
LOC_Os02g39360.1B-box zinc finger family protein, putative, expressedLOC_Os02g39360DBB
LOC_Os02g43170.2B-box zinc finger family protein, putative, expressedLOC_Os02g43170DBB
LOC_Os02g43170.1B-box zinc finger family protein, putative, expressedLOC_Os02g43170DBB
LOC_Os04g41560.4B-box zinc finger family protein, putative, expressedLOC_Os04g41560DBB
LOC_Os04g41560.2B-box zinc finger family protein, putative, expressedLOC_Os04g41560DBB
LOC_Os04g45690.1B-box zinc finger family protein, putative, expressedLOC_Os04g45690DBB
LOC_Os05g11510.1B-box zinc finger family protein, putative, expressedLOC_Os05g11510DBB
LOC_Os06g05890.1B-box zinc finger family protein, putative, expressedLOC_Os06g05890DBB
LOC_Os06g49880.2B-box zinc finger family protein, putative, expressedLOC_Os06g49880DBB
LOC_Os06g49880.1B-box zinc finger family protein, putative, expressedLOC_Os06g49880DBB
LOC_Os09g35880.1B-box zinc finger family protein, putative, expressedLOC_Os09g35880DBB
LOC_Os12g10660.1B-box zinc finger family protein, putative, expressedLOC_Os12g10660DBB