RTFRD: Rice Transcription Factor Regulation Database


C3H Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g07930.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g07930C3H
LOC_Os01g09620.1zinc finger/CCCH transcription factor, putative, expressedLOC_Os01g09620C3H
LOC_Os01g09620.2zinc finger/CCCH transcription factor, putative, expressedLOC_Os01g09620C3H
LOC_Os01g14870.1zinc finger matrin-type protein 5, putative, expressedLOC_Os01g14870C3H
LOC_Os01g15350.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g15350C3H
LOC_Os01g15460.3zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g15460C3H
LOC_Os01g15460.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g15460C3H
LOC_Os01g15460.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g15460C3H
LOC_Os01g39100.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g39100C3H
LOC_Os01g42970.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g42970C3H
LOC_Os01g42970.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g42970C3H
LOC_Os01g45730.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g45730C3H
LOC_Os01g53650.1zinc finger CCCH type family protein, putative, expressedLOC_Os01g53650C3H
LOC_Os01g68860.3zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g68860C3H
LOC_Os01g68860.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g68860C3H
LOC_Os01g68860.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os01g68860C3H
LOC_Os02g06584.3zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g06584C3H
LOC_Os02g06584.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g06584C3H
LOC_Os02g06584.4zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g06584C3H
LOC_Os02g10080.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g10080C3H
LOC_Os02g10080.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g10080C3H
LOC_Os02g19804.1Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressedLOC_Os02g19804C3H
LOC_Os02g45480.1nucleic acid binding protein, putative, expressedLOC_Os02g45480C3H
LOC_Os02g45480.3nucleic acid binding protein, putative, expressedLOC_Os02g45480C3H
LOC_Os02g45480.2nucleic acid binding protein, putative, expressedLOC_Os02g45480C3H
LOC_Os02g58440.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os02g58440C3H
LOC_Os03g02160.3zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os03g02160C3H
LOC_Os03g02160.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os03g02160C3H
LOC_Os03g02160.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os03g02160C3H
LOC_Os03g18950.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os03g18950C3H
LOC_Os03g49170.1zinc finger family protein, putative, expressedLOC_Os03g49170C3H
LOC_Os03g49170.3zinc finger family protein, putative, expressedLOC_Os03g49170C3H
LOC_Os04g01480.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g01480C3H
LOC_Os04g02730.1tRNA-dihydrouridine synthase 3-like, putative, expressedLOC_Os04g02730C3H
LOC_Os04g35800.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g35800C3H
LOC_Os04g41060.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g41060C3H
LOC_Os04g57010.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g57010C3H
LOC_Os04g57010.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g57010C3H
LOC_Os04g57600.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os04g57600C3H
LOC_Os05g03760.1zinc finger family protein, putative, expressedLOC_Os05g03760C3H
LOC_Os05g10670.1zinc finger CCCH type family protein, putative, expressedLOC_Os05g10670C3H
LOC_Os05g41790.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os05g41790C3H
LOC_Os05g45020.1zinc finger/CCCH transcription factor, putative, expressedLOC_Os05g45020C3H
LOC_Os05g50080.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os05g50080C3H
LOC_Os06g21390.1Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressedLOC_Os06g21390C3H
LOC_Os06g21390.2Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressedLOC_Os06g21390C3H
LOC_Os06g21390.4Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressedLOC_Os06g21390C3H
LOC_Os06g21390.3Zinc finger C-x8-C-x5-C-x3-H type domain containing protein, expressedLOC_Os06g21390C3H
LOC_Os06g32720.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g32720C3H
LOC_Os06g32860.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g32860C3H
LOC_Os06g32860.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g32860C3H
LOC_Os06g41384.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g41384C3H
LOC_Os06g41384.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g41384C3H
LOC_Os06g46400.1ATCPSF30/CPSF30, putative, expressedLOC_Os06g46400C3H
LOC_Os06g46890.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g46890C3H
LOC_Os06g49080.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os06g49080C3H
LOC_Os07g04580.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os07g04580C3H
LOC_Os07g04650.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os07g04650C3H
LOC_Os07g38090.2zinc finger family protein, putative, expressedLOC_Os07g38090C3H
LOC_Os07g38090.1zinc finger family protein, putative, expressedLOC_Os07g38090C3H
LOC_Os08g04170.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os08g04170C3H
LOC_Os08g06330.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os08g06330C3H
LOC_Os08g38370.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os08g38370C3H
LOC_Os09g13530.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os09g13530C3H
LOC_Os10g25220.1SAP domain containing protein, expressedLOC_Os10g25220C3H
LOC_Os11g28270.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os11g28270C3H
LOC_Os11g28270.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os11g28270C3H
LOC_Os11g28270.3zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os11g28270C3H
LOC_Os12g03554.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os12g03554C3H
LOC_Os12g18120.2zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os12g18120C3H
LOC_Os12g18120.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os12g18120C3H
LOC_Os12g18120.4zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os12g18120C3H
LOC_Os12g21700.1zinc finger C-x8-C-x5-C-x3-H type family protein, expressedLOC_Os12g21700C3H
LOC_Os12g33090.1zinc finger family protein, putative, expressedLOC_Os12g33090C3H