RTFRD: Rice Transcription Factor Regulation Database


ARF Family Information


Explanation of Motif Confidence

The number of stars to represent the confidence level of TF binding motif.

A set of manually curated, non-redundancy and high-quality TF binding Motifs downloaded from PlantTFDB
In the same family, the TFs with high TF sequence similarity(e-value < 1e-10) to the three stars use the same motif
In the same family, the TFs with high TF sequence similarity(e-value > 1e-10 or e-value < 1e-4) to the three stars use the same motif
blankNo TF binding Motifs (e-value > 1e-4)
TF id TF annotation Motif Confidence Gene id Family Detail
LOC_Os01g13520.1auxin response factor 1, putative, expressedLOC_Os01g13520ARF
LOC_Os01g13520.2auxin response factor 1, putative, expressedLOC_Os01g13520ARF
LOC_Os01g48060.2auxin response factor, putative, expressedLOC_Os01g48060ARF
LOC_Os01g48060.3auxin response factor, putative, expressedLOC_Os01g48060ARF
LOC_Os01g48060.1auxin response factor, putative, expressedLOC_Os01g48060ARF
LOC_Os01g54990.1auxin response factor, putative, expressedLOC_Os01g54990ARF
LOC_Os01g70270.3auxin response factor, putative, expressedLOC_Os01g70270ARF
LOC_Os01g70270.1auxin response factor, putative, expressedLOC_Os01g70270ARF
LOC_Os01g70270.2auxin response factor, putative, expressedLOC_Os01g70270ARF
LOC_Os01g70270.4auxin response factor, putative, expressedLOC_Os01g70270ARF
LOC_Os02g04810.1auxin response factor 5, putative, expressedLOC_Os02g04810ARF
LOC_Os02g06910.1auxin response factor 6, putative, expressedLOC_Os02g06910ARF
LOC_Os02g35140.1auxin response factor 7, putative, expressedLOC_Os02g35140ARF
LOC_Os02g41800.1auxin response factor, putative, expressedLOC_Os02g41800ARF
LOC_Os02g41800.2auxin response factor, putative, expressedLOC_Os02g41800ARF
LOC_Os04g36054.1auxin response factor 9, putative, expressedLOC_Os04g36054ARF
LOC_Os04g43910.1auxin response factor, putative, expressedLOC_Os04g43910ARF
LOC_Os04g56850.1auxin response factor, putative, expressedLOC_Os04g56850ARF
LOC_Os04g56850.2auxin response factor, putative, expressedLOC_Os04g56850ARF
LOC_Os04g57610.3auxin response factor, putative, expressedLOC_Os04g57610ARF
LOC_Os04g57610.1auxin response factor, putative, expressedLOC_Os04g57610ARF
LOC_Os04g59430.1auxin response factor, putative, expressedLOC_Os04g59430ARF
LOC_Os05g43920.1auxin response factor 14, putative, expressedLOC_Os05g43920ARF
LOC_Os05g48870.1auxin response factor 15, putative, expressedLOC_Os05g48870ARF
LOC_Os06g09660.1auxin response factor, putative, expressedLOC_Os06g09660ARF
LOC_Os06g46410.1auxin response factor, putative, expressedLOC_Os06g46410ARF
LOC_Os06g46410.2auxin response factor, putative, expressedLOC_Os06g46410ARF
LOC_Os06g47150.1auxin response factor 18, putative, expressedLOC_Os06g47150ARF
LOC_Os06g47150.3auxin response factor 18, putative, expressedLOC_Os06g47150ARF
LOC_Os06g47150.2auxin response factor 18, putative, expressedLOC_Os06g47150ARF
LOC_Os06g47150.4auxin response factor 18, putative, expressedLOC_Os06g47150ARF
LOC_Os06g48950.1auxin response factor 19, putative, expressedLOC_Os06g48950ARF
LOC_Os07g08520.1auxin response factor, putative, expressedLOC_Os07g08520ARF
LOC_Os07g08540.1auxin response factor 20, putative, expressedLOC_Os07g08540ARF
LOC_Os07g08600.1auxin response factor, putative, expressedLOC_Os07g08600ARF
LOC_Os08g40900.2auxin response factor, putative, expressedLOC_Os08g40900ARF
LOC_Os08g40900.1auxin response factor, putative, expressedLOC_Os08g40900ARF
LOC_Os10g33940.1auxin response factor 18, putative, expressedLOC_Os10g33940ARF
LOC_Os11g32110.3auxin response factor, putative, expressedLOC_Os11g32110ARF
LOC_Os11g32110.4auxin response factor, putative, expressedLOC_Os11g32110ARF
LOC_Os11g32110.2auxin response factor, putative, expressedLOC_Os11g32110ARF
LOC_Os11g32110.1auxin response factor, putative, expressedLOC_Os11g32110ARF
LOC_Os12g29520.5auxin response factor, putative, expressedLOC_Os12g29520ARF
LOC_Os12g29520.2auxin response factor, putative, expressedLOC_Os12g29520ARF
LOC_Os12g29520.3auxin response factor, putative, expressedLOC_Os12g29520ARF
LOC_Os12g29520.1auxin response factor, putative, expressedLOC_Os12g29520ARF
LOC_Os12g29520.4auxin response factor, putative, expressedLOC_Os12g29520ARF
LOC_Os12g41950.1auxin response factor, putative, expressedLOC_Os12g41950ARF