PHAS_Loci	Chromosome	Genome_start	Genome_end	Locus_Gene	Transcript	PHAS_Gene_Type	Transcript_start	Transcript_end	Pvalue	PhaseScore	PhaseRatio	Annotation	Method_Ref	Tag	recorder	Target_verified	Initiator_Verified	Initiator_Number
GmaPHAS16g100306468.1@21#1	16	30978046	30978487	LOC100306468	NM_001248556.2	mRNA	264	705	1.2198284363734292e-08	260.319	0.732	uncharacterized protein LOC100306468	PG,HC,PC,HG	HC1	1	yes	no	0
GmaPHAS1g100305458.1@21#1	1	1024207	1024499	LOC100305458	NM_001248742.1	mRNA	573	865	1.1985915100632586e-07	25.143	1.0	NBS-LRR type disease resistance protein	PG,HC,PC,HG	HC2	2	yes	no	0
GmaPHAS3g547967.1@21#1	3	40935998	40935788	LOC547967	NM_001249799.2	mRNA	227	437	0.0001689383117987008	-	-	nodulin-26	HC,HG	HC3	3	yes	yes	2
GmaPHAS19g100527509.1@21#1	19	44905149	44904677	LOC100527509	NM_001250133.2	mRNA	148	526	1.790771300506184e-14	53.738	0.43	aquaporin TIP1-8	PG,HC,PC,HG	HC4	4	yes	yes	12
GmaPHAS19g100527509.1@21#2	19	44905148	44904875	LOC100527509	NM_001250133.2	mRNA	149	422	6.568190140432548e-07	-	-	aquaporin TIP1-8	HC	HC5	5	yes	yes	5
GmaPHAS19g100527509.1@21#3	19	44905099	44904889	LOC100527509	NM_001250133.2	mRNA	198	408	0.0004427886357063967	-	-	aquaporin TIP1-8	HC	HC6	6	yes	yes	2
GmaPHAS1g100170674.1@21#1	1	50158742	50157946	LOC100170674	NM_001250561.2	mRNA	260	766	1.6952087571917463e-21	24.128	0.937	abscisic acid 8-hydroxylase	PG,HC,HG	HC7	7	yes	no	0
GmaPHAS19g548035.1@21#1	19	9158930	9158592	LOC548035	NM_001250837.2	mRNA	807	1145	7.186001085367095e-15	41.33	0.894	resistance protein KR1	HC,PC,HG	HC8	8	yes	no	0
GmaPHAS15g100305356.1@21#1	15	14998222	14997802	LOC100305356	NM_001250995.1	mRNA	585	1005	7.950683515884875e-28	59.046	0.639	CC-NBS-LRR class disease resistance protein	PG,HC,PC,HG	HC9	9	yes	yes	2
GmaPHAS15g100305356.1@21#2	15	14998076	14996912	LOC100305356	NM_001250995.1	mRNA	731	1069	4.6150902107106544e-17	-	-	CC-NBS-LRR class disease resistance protein	HC	HC10	10	yes	no	0
GmaPHAS15g100305356.1@21#3	15	14996767	14996387	LOC100305356	NM_001250995.1	mRNA	1214	1594	3.5154796637738525e-08	16.648	0.474	CC-NBS-LRR class disease resistance protein	PG,HC,HG	HC11	11	yes	no	0
GmaPHAS1g547567.1@21#1	1	53932244	53930442	LOC547567	NM_001251556.2	mRNA	167	568	7.428482964182422e-21	51.033	0.919	plasma membrane Ca2+-ATPase	PG,HC,PC,HG	HC12	12	yes	no	0
GmaPHAS14g100808660.1@21#1	14	47462770	47463045	LOC100808660	NM_001254468.1	mRNA	442	717	2.8470739555571187e-09	18.281	0.824	uncharacterized protein LOC100808660	PG,HC,HG	HC13	13	yes	no	0
GmaPHAS18g100785952.1@21#1	18	4322319	4323475	LOC100785952	NM_001255074.1	mRNA	93	389	5.7334794509981095e-18	44.448	0.727	cation efflux family protein	PG,HC,PC,HG	HC14	14	yes	yes	1
GmaPHAS18g100785952.1@21#2	18	4322341	4323765	LOC100785952	NM_001255074.1	mRNA	115	474	3.4598855448559203e-10	-	-	cation efflux family protein	HC	HC15	15	yes	yes	1
GmaPHAS2g100795618.1@21#1	2	46534821	46534376	LOC100795618	NM_001255851.2	mRNA	826	1099	6.303853593056865e-07	-	-	uncharacterized protein LOC100795618	HC	HC16	16	yes	no	0
GmaPHAS11g100170701.1@21#1	11	797709	798516	LOC100170701	NM_001317656.2	mRNA	392	728	4.683265128168699e-09	-	-	chalcone synthase	HC,HG	HC17	17	yes	no	0
GmaPHAS20g547459.1@21#1	20	42195668	42195540	LOC547459	NM_001329089.1	mRNA	556	684	1.989454164413711e-05	-	-	transcription factor MYB13	HC	HC18	18	yes	no	0
GmaPHAS1g100777517.1@21#1	1	46730903	46730737	LOC100777517	NM_001348662.1	mRNA	155	321	1.4478144862204258e-05	15.191	0.852	glycinol 2-dimethylallyl transferase	HC,PC,HG	HC19	19	yes	no	0
GmaPHAS13g100817896.1@21#1	13	29803016	29803627	LOC100817896	NM_001353616.1	mRNA	668	1279	4.6871290552960787e-20	168.914	0.677	NBS-LRR type disease resistance protein RPG1-B	PG,HC,PC,HG	HC20	20	yes	no	0
GmaPHAS13g100817896.1@21#2	13	29803036	29804069	LOC100817896	NM_001353616.1	mRNA	688	1721	7.745604682648287e-20	-	-	NBS-LRR type disease resistance protein RPG1-B	HC	HC21	21	yes	no	0
GmaPHAS2g100809794.1@21#1	2	16118943	16119132	LOC100809794	NM_001358243.1	mRNA	1740	1929	0.00011785988460805209	36.916	0.981	protein TRANSPORT INHIBITOR RESPONSE 1A	PG,HC,PC,HG	HC22	22	yes	yes	10
GmaPHAS19g100779021.1@21#1	19	46750960	46751107	LOC100779021	NM_001358245.1	mRNA	1771	1918	1.170267155537477e-06	23.021	1.0	protein TRANSPORT INHIBITOR RESPONSE 1C	PG,HC,PC,HG	HC23	23	yes	yes	10
GmaPHAS3g100816241.1@21#1	3	42791246	42791393	LOC100816241	NM_001358246.1	mRNA	1735	1882	6.501484197430428e-08	25.077	1.0	protein TRANSPORT INHIBITOR RESPONSE 1D	PG,HC,PC,HG	HC24	24	yes	yes	10
GmaPHAS19g100812516.1@21#1	19	35216500	35216290	LOC100812516	NM_001358247.1	mRNA	2206	2416	1.967118835067849e-07	74.865	0.912	auxin signaling F-box 3 protein	PG,HC,PC,HG	HC25	25	yes	yes	15
GmaPHAS16g100788209.1@21#1	16	4842023	4842233	LOC100788209	NM_001358249.1	mRNA	2275	2485	4.2512580312744073e-07	75.043	0.904	auxin signaling F-box 3 protein	PG,HC,PC,HG	HC26	26	yes	yes	15
GmaPHAS2g100778452.1@21#1	2	11865994	11865824	LOC100778452	NM_001362703.1	mRNA	314	484	9.570637962579035e-08	17.378	0.954	OmpH and DnaJ domain-containing protein	PG,HC,PC,HG	HC27	27	yes	no	0
GmaPHAS16g547562.1@21#1	16	29566771	29566349	LOC547562	NM_001371836.1	mRNA	841	1263	8.010799469193138e-16	32.409	0.629	resistance protein MG23	HC,PC,HG	HC28	28	yes	no	0
GmaPHAS16g547562.1@21#2	16	29566709	29566499	LOC547562	NM_001371836.1	mRNA	903	1113	8.878539322201851e-06	-	-	resistance protein MG23	HC	HC29	29	yes	no	0
GmaPHAS16g547562.1@21#3	16	29566444	29566171	LOC547562	NM_001371836.1	mRNA	1168	1441	8.548762164657602e-05	-	-	resistance protein MG23	HC	HC30	30	yes	no	0
GmaPHAS16g547562.1@21#4	16	29566068	29565673	LOC547562	NM_001371836.1	mRNA	1544	1756	0.00031115518095056716	-	-	resistance protein MG23	HC	HC31	31	yes	no	0
GmaPHAS1g100788025.1@21#1	1	51942986	51943175	LOC100788025	XM_003517157.5	mRNA	761	950	2.166726648779738e-11	39.978	1.0	disease resistance RPP8-like protein 3	PG,HC,PC,HG	HC35	32	yes	yes	2
GmaPHAS1g100805346.1@21#1	1	1035858	1036007	LOC100805346	XM_003517602.5	mRNA	823	972	5.963795363023095e-07	-	-	disease resistance protein RPM1	HC,HG	HC36	33	yes	no	0
GmaPHAS2g100809105.1@21#1	2	48234477	48235152	LOC100809105	XM_003519471.5	mRNA	3125	3379	3.0098293367557996e-08	26.194	0.854	auxin response factor 6	HC,PC,HG	HC37	34	yes	yes	11
GmaPHAS2g100809105.1@21#2	2	48234962	48235153	LOC100809105	XM_003519471.5	mRNA	3189	3380	2.1402411679573006e-05	-	-	auxin response factor 6	HC	HC38	35	yes	yes	11
GmaPHAS3g100775612.1@21#1	3	4025070	4024921	LOC100775612	XM_003521942.5	mRNA	1308	1457	0.00034900928976098463	-	-	putative disease resistance RPP13-like protein 1	HC	HC39	36	yes	no	0
GmaPHAS5g100807738.1@21#1	5	38276544	38275979	LOC100807738	XM_003525112.5	mRNA	311	876	8.63805747557785e-18	188.199	0.661	protein SUPPRESSOR OF GENE SILENCING 3	PG,HC,PC,HG	HC40	37	yes	no	0
GmaPHAS5g100807738.1@21#2	5	38276482	38275682	LOC100807738	XM_003525112.5	mRNA	373	1173	1.7359760075050972e-09	-	-	protein SUPPRESSOR OF GENE SILENCING 3	HC	HC41	38	yes	no	0
GmaPHAS5g100799575.1@21#1	5	5914119	5913909	LOC100799575	XM_003525839.5	mRNA	408	618	1.6908449128477457e-08	59.181	0.625	transcription factor MYB114	PG,HC,PC,HG	HC42	39	yes	no	0
GmaPHAS6g100789918.1@21#1	6	2186535	2186747	LOC100789918	XM_003527817.5	mRNA	2185	2397	0.0004518339344768791	25.125	0.466	purple acid phosphatase 2	PG,HC,PC,HG	HC43	40	yes	no	0
GmaPHAS7g100785870.1@21#1	7	4021509	4022102	LOC100785870	XM_003528706.5	mRNA	860	1175	1.2996870429237116e-12	45.234	0.308	NAC domain-containing protein 92	PG,HC,PC,HG	HC44	41	yes	yes	2
GmaPHAS7g100785870.1@21#2	7	4021510	4022143	LOC100785870	XM_003528706.5	mRNA	861	1216	3.8334336916541313e-13	-	-	NAC domain-containing protein 92	HC	HC45	42	yes	yes	2
GmaPHAS7g100786383.1@21#1	7	4036843	4037074	LOC100786383	XM_003528707.4	mRNA	877	1108	2.5502324697702e-07	47.5	0.505	NAC domain-containing protein 91	PG,HC,PC,HG	HC46	43	yes	yes	2
GmaPHAS7g100786383.1@21#2	7	4036863	4037115	LOC100786383	XM_003528707.4	mRNA	897	1149	2.131210720840254e-09	-	-	NAC domain-containing protein 91	HC	HC47	44	yes	yes	2
GmaPHAS8g100806203.1@21#1	8	7677347	7677035	LOC100806203	XM_003531122.5	mRNA	3518	3728	7.125755294854009e-06	46.119	0.848	auxin response factor 6 isoform X2	PG,HC,PC,HG	HC48	45	yes	no	0
GmaPHAS9g100814966.1@21#1	9	40538906	40538698	LOC100814966	XM_003533264.5	mRNA	416	624	2.603155643267516e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC49	46	yes	no	0
GmaPHAS9g100820121.1@21#1	9	5734936	5735104	LOC100820121	XM_003533696.5	mRNA	303	471	2.2370409210379645e-12	34.383	1.0	calcium-transporting ATPase 8, plasma membrane-type	PG,HC,PC,HG	HC50	47	yes	no	0
GmaPHAS9g100101861.1@21#1	9	40118538	40118286	LOC100101861	XM_003534041.5	mRNA	1204	1456	4.644828957425429e-11	35.634	0.435	protein REVEILLE 7-like isoform X1	PG,HC,PC,HG	HC51	48	yes	no	0
GmaPHAS9g100101861.1@21#2	9	40118537	40118157	LOC100101861	XM_003534041.5	mRNA	1205	1585	5.898442200039373e-10	-	-	protein REVEILLE 7-like isoform X1	HC	HC52	49	yes	no	0
GmaPHAS9g100780737.1@21#1	9	45038369	45038134	LOC100780737	XM_003534293.5	mRNA	441	588	3.3979882564967394e-09	16.31	1.0	abscisic acid 8-hydroxylase CYP707A2	PG,HC,HG	HC53	50	yes	no	0
GmaPHAS9g100792448.1@21#1	9	2040078	2038231	LOC100792448	XM_003534726.4	mRNA	3099	3521	6.603955620773626e-27	118.065	0.852	endoribonuclease Dicer homolog 2 isoform X1	PG,HC,PC,HG	HC54	51	yes	yes	2
GmaPHAS9g100792448.1@21#2	9	2039454	2037776	LOC100792448	XM_003534726.4	mRNA	3184	3732	2.3746916892185813e-20	-	-	endoribonuclease Dicer homolog 2 isoform X1	HC	HC55	52	yes	yes	2
GmaPHAS9g100805537.1@21#1	9	2059455	2059038	LOC100805537	XM_003535056.5	mRNA	2496	2830	3.8923271807935893e-13	47.888	0.984	endoribonuclease Dicer homolog 2 isoform X2	PG,HC,PC,HG	HC56	53	yes	no	0
GmaPHAS10g100779337.1@21#1	10	1860390	1860201	LOC100779337	XM_003536233.5	mRNA	1727	1916	6.889642973102218e-09	51.652	0.983	protein TRANSPORT INHIBITOR RESPONSE 1	PG,HC,PC,HG	HC57	55	yes	yes	10
GmaPHAS11g100788797.1@21#1	11	5373082	5372874	LOC100788797	XM_003537565.5	mRNA	794	1002	2.4891698863676737e-14	49.154	1.0	disease resistance RPP8-like protein 3	PG,HC,PC,HG	HC58	56	yes	yes	2
GmaPHAS11g100788797.1@21#2	11	5372726	5372598	LOC100788797	XM_003537565.5	mRNA	1150	1278	9.479163959853564e-05	-	-	disease resistance RPP8-like protein 3	HC	HC59	57	yes	no	0
GmaPHAS11g100792691.1@21#1	11	3596575	3596703	LOC100792691	XM_003539230.5	mRNA	477	605	1.989454164413711e-05	-	-	calcium-transporting ATPase 2, plasma membrane-type	HC	HC60	58	yes	no	0
GmaPHAS12g100796390.1@21#1	12	38270154	38270072	LOC100796390	XM_003540341.5	mRNA	1740	1822	1.563104339888379e-05	-	-	transcription factor TCP4	HC	HC61	59	yes	yes	15
GmaPHAS12g100808261.1@21#1	12	6717636	6717510	LOC100808261	XM_003540735.5	mRNA	2095	2221	3.70689802004574e-05	-	-	DDT domain-containing protein PTM	HC	HC62	60	yes	no	0
GmaPHAS13g100798719.1@21#1	13	32870337	32870769	LOC100798719	XM_003542903.5	mRNA	3329	3474	3.2412280236745366e-07	23.021	0.974	auxin response factor 6 isoform X2	HC,PC	HC63	61	yes	yes	1
GmaPHAS13g100814907.1@21#1	13	38620507	38620589	LOC100814907	XM_003543263.5	mRNA	1358	1440	0.00034900928976098463	-	-	transcription factor TCP4	HC,HG	HC64	62	yes	yes	15
GmaPHAS13g100814907.1@21#2	13	38620569	38620697	LOC100814907	XM_003543263.5	mRNA	1420	1548	1.170267155537477e-06	-	-	transcription factor TCP4	HC	HC65	63	yes	yes	12
GmaPHAS14g100808134.1@21#1	14	47455307	47455496	LOC100808134	XM_003544866.5	mRNA	696	885	6.981269848087751e-07	-	-	probable O-methyltransferase 3	HC,HG	HC66	64	yes	yes	1
GmaPHAS15g100792404.1@21#1	15	44673976	44673848	LOC100792404	XM_003545782.5	mRNA	563	691	6.69652872335334e-06	15.31	1.0	putative disease resistance protein At3g14460 isoform X1	PG,HC,HG	HC67	65	yes	no	0
GmaPHAS15g100796447.1@21#1	15	6971305	6970771	LOC100796447	XM_003546018.5	mRNA	3225	3477	0.00010299680932035123	19.9	0.895	auxin response factor 6 isoform X2	HC,PC	HC68	66	yes	no	0
GmaPHAS16g100807994.1@21#1	16	37185835	37186547	LOC100807994	XM_003548234.5	mRNA	1026	1738	1.0978011934235508e-11	-	-	TMV resistance protein N isoform X1	HC,HG	HC69	67	yes	no	0
GmaPHAS16g100807994.1@21#2	16	37185918	37186403	LOC100807994	XM_003548234.5	mRNA	1109	1594	3.567860446666735e-17	-	-	TMV resistance protein N isoform X1	HC	HC70	68	yes	no	0
GmaPHAS16g100807994.1@21#3	16	37185973	37186204	LOC100807994	XM_003548234.5	mRNA	1164	1395	0.00010995383798920207	-	-	TMV resistance protein N isoform X1	HC	HC71	69	yes	no	0
GmaPHAS16g778089.1@21#1	16	37693269	37692952	LOC778089	XM_003548266.4	mRNA	1201	1518	3.345041746845074e-10	36.007	0.549	protein REVEILLE 7 isoform X2	PG,HC,PC,HG	HC72	70	yes	no	0
GmaPHAS16g778089.1@21#2	16	37693268	37692804	LOC778089	XM_003548266.4	mRNA	1202	1666	4.011414826611178e-13	-	-	protein REVEILLE 7 isoform X2	HC	HC73	71	yes	no	0
GmaPHAS16g100779816.1@21#1	16	1443062	1444036	LOC100779816	XM_003548339.5	mRNA	753	1257	7.190046745904479e-14	142.636	0.555	NAC domain-containing protein 76	PG,HC,PC,HG	HC74	72	yes	yes	2
GmaPHAS16g100779816.1@21#2	16	1443063	1444081	LOC100779816	XM_003548339.5	mRNA	754	1302	1.427897785974856e-13	-	-	NAC domain-containing protein 76	HC	HC75	73	yes	yes	2
GmaPHAS16g100779816.1@21#3	16	1443124	1444016	LOC100779816	XM_003548339.5	mRNA	815	1237	5.1724389974699806e-11	-	-	NAC domain-containing protein 76	HC	HC76	74	yes	yes	2
GmaPHAS16g100809413.1@21#1	16	10299420	10299275	LOC100809413	XM_003548583.5	mRNA	233	378	5.829225634514507e-10	32.149	1.0	disease resistance protein RPV1	PG,HC,PC,HG	HC77	75	yes	yes	1
GmaPHAS16g100789435.1@21#1	16	36304461	36304902	LOC100789435	XM_003549077.4	mRNA	451	892	2.0407877642270905e-19	70.51	0.656	pentatricopeptide repeat-containing protein At1g62930, chloroplastic	PG,HC,PC,HG	HC78	76	yes	yes	1
GmaPHAS16g100789435.1@21#2	16	36304567	36304966	LOC100789435	XM_003549077.4	mRNA	557	956	8.351985811310399e-08	-	-	pentatricopeptide repeat-containing protein At1g62930, chloroplastic	HC	HC79	77	yes	yes	1
GmaPHAS16g100789435.1@21#3	16	36304702	36305038	LOC100789435	XM_003549077.4	mRNA	692	1028	1.6329554792274642e-09	-	-	pentatricopeptide repeat-containing protein At1g62930, chloroplastic	HC,HG	HC80	78	yes	no	0
GmaPHAS16g100789435.1@21#4	16	36305018	36305377	LOC100789435	XM_003549077.4	mRNA	1008	1367	1.7031310195050487e-09	-	-	pentatricopeptide repeat-containing protein At1g62930, chloroplastic	HC	HC81	79	yes	no	0
GmaPHAS17g100811754.1@21#1	17	11657800	11657569	LOC100811754	XM_003549876.5	mRNA	399	630	0.0003999153817071963	24.582	0.432	transcription factor MYB114	PG,HC,PC,HG	HC82	80	yes	no	0
GmaPHAS17g100811754.1@21#2	17	11657759	11657549	LOC100811754	XM_003549876.5	mRNA	440	650	6.556032045829703e-05	-	-	transcription factor MYB114	HC	HC83	81	yes	no	0
GmaPHAS19g100792320.1@21#1	19	9199746	9199475	LOC100792320	XM_003553308.5	mRNA	880	1151	1.0069875546994093e-06	29.843	0.949	TMV resistance protein N	HC,PC,HG	HC84	82	yes	yes	1
GmaPHAS19g100795479.1@21#1	19	40530064	40530402	LOC100795479	XM_003553366.4	mRNA	792	1130	1.1002790160379991e-14	30.724	0.876	disease resistance protein RGA2	PG,HC,PC,HG	HC85	83	yes	no	0
GmaPHAS14g100781008.1@21#1	14	47478540	47478666	LOC100781008	XM_003556994.5	mRNA	722	848	1.563104339888379e-05	-	-	probable O-methyltransferase 3	HC,HG	HC86	84	yes	yes	1
GmaPHAS2g100775579.1@21#1	2	17550171	17550087	LOC100775579	XM_006575061.4	mRNA	915	999	3.2220960005818184e-06	-	-	probable mediator of RNA polymerase II transcription subunit 26b isoform X1	HC	HC87	85	yes	yes	10
GmaPHAS2g100775579.2@21#1	2	17550171	17550087	LOC100775579	XM_006575062.4	mRNA	807	891	3.2220960005818184e-06	-	-	probable mediator of RNA polymerase II transcription subunit 26b isoform X1	HC	HC88	86	yes	yes	10
GmaPHAS3g100808753.1@21#1	3	19881184	19881329	LOC100808753	XM_006576513.4	mRNA	293	438	3.118515771550971e-11	51.847	0.995	disease resistance protein RPV1	PG,HC,PC,HG	HC89	87	yes	yes	1
GmaPHAS3g100808753.1@21#2	3	19881353	19883309	LOC100808753	XM_006576513.4	mRNA	462	819	1.1002790160379991e-14	-	-	disease resistance protein RPV1	HC,HG	HC90	88	yes	no	0
GmaPHAS3g102668936.1@21#1	3	42806931	42806475	LOC102668936	XM_006577060.4	mRNA	219	429	2.9792423128969768e-08	18.941	0.753	bidirectional sugar transporter NEC1	HC,PC	HC91	89	yes	no	0
GmaPHAS4g100781872.1@21#1	4	20207175	20207742	LOC100781872	XM_006578431.3	mRNA	901	1468	2.6701648477191018e-20	78.439	0.777	putative disease resistance protein RGA4	PG,HC,PC,HG	HC92	90	yes	yes	4
GmaPHAS4g100781872.1@21#2	4	20207384	20207743	LOC100781872	XM_006578431.3	mRNA	1110	1469	1.2874050654638815e-11	-	-	putative disease resistance protein RGA4	HC	HC93	91	yes	no	0
GmaPHAS4g100781872.2@21#1	4	20207175	20207742	LOC100781872	XM_006578432.4	mRNA	901	1468	2.6701648477191018e-20	78.439	0.777	putative disease resistance protein RGA4	PG,HC,PC,HG	HC94	92	yes	yes	4
GmaPHAS4g100781872.2@21#2	4	20207384	20207743	LOC100781872	XM_006578432.4	mRNA	1110	1469	1.2874050654638815e-11	-	-	putative disease resistance protein RGA4	HC	HC95	93	yes	no	0
GmaPHAS6g100814717.1@21#1	6	44683683	44683895	LOC100814717	XM_006582166.4	mRNA	1152	1364	1.826954622846736e-10	48.617	0.956	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC96	94	yes	no	0
GmaPHAS6g100786903.1@21#1	6	47008983	47008521	LOC100786903	XM_006582232.3	mRNA	901	1363	2.722224727254168e-21	94.586	0.526	disease resistance protein RUN1	PG,HC,PC,HG	HC97	95	yes	no	0
GmaPHAS6g100786903.1@21#2	6	47008889	47008555	LOC100786903	XM_006582232.3	mRNA	995	1329	4.04956577086482e-07	-	-	disease resistance protein RUN1	HC	HC98	96	yes	no	0
GmaPHAS8g100806203.2@21#1	8	7677347	7677035	LOC100806203	XM_006585030.4	mRNA	3521	3731	7.125755294854009e-06	46.119	0.848	auxin response factor 6 isoform X1	PG,HC,PC,HG	HC99	97	yes	no	0
GmaPHAS8g100801950.1@21#1	8	23481807	23481658	LOC100801950	XM_006585782.4	mRNA	695	844	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3	HC,HG	HC100	98	yes	no	0
GmaPHAS8g100810811.1@21#1	8	41333137	41332255	LOC100810811	XM_006585964.4	mRNA	197	848	4.797649510676022e-22	93.553	0.603	TMV resistance protein N	PG,HC,PC,HG	HC101	99	yes	no	0
GmaPHAS8g100810811.1@21#2	8	41332968	41332338	LOC100810811	XM_006585964.4	mRNA	366	765	1.1160996670917721e-11	-	-	TMV resistance protein N	HC	HC102	100	yes	no	0
GmaPHAS9g100792448.2@21#1	9	2040078	2038231	LOC100792448	XM_006586783.3	mRNA	3096	3518	6.603955620773626e-27	118.065	0.852	endoribonuclease Dicer homolog 2 isoform X2	PG,HC,PC,HG	HC103	101	yes	yes	2
GmaPHAS9g100792448.2@21#2	9	2039454	2037776	LOC100792448	XM_006586783.3	mRNA	3181	3729	2.3746916892185813e-20	-	-	endoribonuclease Dicer homolog 2 isoform X2	HC	HC104	102	yes	yes	2
GmaPHAS9g100792448.3@21#1	9	2040078	2038231	LOC100792448	XM_006586784.4	mRNA	3152	3574	6.603955620773626e-27	118.065	0.852	endoribonuclease Dicer homolog 2 isoform X3	PG,HC,PC,HG	HC105	103	yes	yes	2
GmaPHAS9g100792448.3@21#2	9	2039454	2037776	LOC100792448	XM_006586784.4	mRNA	3237	3785	2.3746916892185813e-20	-	-	endoribonuclease Dicer homolog 2 isoform X3	HC	HC106	104	yes	yes	2
GmaPHAS9g100820121.2@21#1	9	5734936	5735104	LOC100820121	XM_006586938.4	mRNA	180	348	2.2370409210379645e-12	34.383	1.0	calcium-transporting ATPase 8, plasma membrane-type	PG,HC,PC,HG	HC107	105	yes	no	0
GmaPHAS16g100794739.1@21#1	16	32376150	32375812	LOC100794739	XM_006586948.4	mRNA	448	786	4.450179100709608e-10	25.548	0.332	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	PG,HC,PC,HG	HC108	106	yes	no	0
GmaPHAS16g100794739.1@21#2	16	32376067	32375813	LOC100794739	XM_006586948.4	mRNA	531	785	5.068917923095441e-06	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC109	107	yes	no	0
GmaPHAS16g100794739.1@21#3	16	32375885	32375719	LOC100794739	XM_006586948.4	mRNA	713	879	0.00026715389986896223	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC110	108	yes	no	0
GmaPHAS16g100794739.2@21#1	16	32376150	32375812	LOC100794739	XM_006586949.4	mRNA	448	786	4.450179100709608e-10	25.548	0.332	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	PG,HC,PC,HG	HC111	109	yes	no	0
GmaPHAS16g100794739.2@21#2	16	32376067	32375813	LOC100794739	XM_006586949.4	mRNA	531	785	5.068917923095441e-06	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC112	110	yes	no	0
GmaPHAS16g100794739.2@21#3	16	32375885	32375719	LOC100794739	XM_006586949.4	mRNA	713	879	0.00026715389986896223	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC113	111	yes	no	0
GmaPHAS9g100786599.1@21#1	9	41010599	41010391	LOC100786599	XM_006587408.4	mRNA	464	672	1.340943811869525e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X1	HC	HC114	112	yes	no	0
GmaPHAS9g100778420.1@21#1	9	47953872	47954504	LOC100778420	XM_006587773.3	mRNA	415	1047	2.4200099759575002e-21	64.543	0.418	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1	PG,HC,PC,HG	HC115	113	yes	no	0
GmaPHAS9g100778420.1@21#2	9	47953873	47954568	LOC100778420	XM_006587773.3	mRNA	416	1111	5.290212449832146e-22	-	-	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X1	HC	HC116	114	yes	no	0
GmaPHAS9g100778420.2@21#1	9	47953872	47954504	LOC100778420	XM_006587774.3	mRNA	415	1047	2.4200099759575002e-21	64.543	0.418	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2	PG,HC,PC,HG	HC117	115	yes	no	0
GmaPHAS9g100778420.2@21#2	9	47953873	47954568	LOC100778420	XM_006587774.3	mRNA	416	1111	5.290212449832146e-22	-	-	pentatricopeptide repeat-containing protein At3g22470, mitochondrial isoform X2	HC	HC118	116	yes	no	0
GmaPHAS12g100814688.1@21#1	12	851872	851286	LOC100814688	XM_006591933.4	mRNA	689	1275	1.5948225815611304e-32	93.439	0.87	disease resistance protein RPP13	PG,HC,PC,HG	HC119	117	yes	no	0
GmaPHAS12g100814688.1@21#2	12	851598	851262	LOC100814688	XM_006591933.4	mRNA	963	1299	0.00012155699178080936	-	-	disease resistance protein RPP13	HC	HC120	118	yes	no	0
GmaPHAS12g100799733.1@21#1	12	39269059	39268973	LOC100799733	XM_006592833.4	mRNA	1036	1122	7.748688626696225e-05	-	-	probable disease resistance protein At4g27220	HC	HC121	119	yes	no	0
GmaPHAS12g102660573.1@21#1	12	40971306	40970676	LOC102660573	XM_006592897.4	mRNA	998	1628	3.275566343194627e-23	127.395	0.673	probable disease resistance protein At1g61300 isoform X1	PG,HC,PC,HG	HC122	120	yes	yes	3
GmaPHAS12g102660573.1@21#2	12	40971093	40970715	LOC102660573	XM_006592897.4	mRNA	1211	1589	1.7096761155211807e-08	-	-	probable disease resistance protein At1g61300 isoform X1	HC	HC123	121	yes	no	0
GmaPHAS12g102660573.2@21#1	12	40971306	40970676	LOC102660573	XM_006592898.4	mRNA	990	1620	3.275566343194627e-23	127.395	0.673	probable disease resistance protein At1g61300 isoform X2	PG,HC,PC,HG	HC124	122	yes	yes	3
GmaPHAS12g102660573.2@21#2	12	40971093	40970715	LOC102660573	XM_006592898.4	mRNA	1203	1581	1.7096761155211807e-08	-	-	probable disease resistance protein At1g61300 isoform X2	HC	HC125	123	yes	no	0
GmaPHAS13g100811488.1@21#1	13	29588695	29589138	LOC100811488	XM_006594290.4	mRNA	760	1203	1.7713191278441936e-26	76.091	0.733	putative disease resistance RPP13-like protein 1	PG,HC,PC,HG	HC126	124	yes	no	0
GmaPHAS13g100811488.1@21#2	13	29588761	29589202	LOC100811488	XM_006594290.4	mRNA	826	1267	1.7966600094329596e-12	-	-	putative disease resistance RPP13-like protein 1	HC	HC127	125	yes	no	0
GmaPHAS13g100783712.1@21#1	13	30329813	30330340	LOC100783712	XM_006594322.4	mRNA	749	1276	1.1741300498507292e-22	133.762	0.711	putative disease resistance RPP13-like protein 1 isoform X3	PG,HC,PC,HG	HC128	126	yes	no	0
GmaPHAS13g100783712.1@21#2	13	30329877	30330761	LOC100783712	XM_006594322.4	mRNA	813	1697	5.272242752939295e-16	-	-	putative disease resistance RPP13-like protein 1 isoform X3	HC	HC129	127	yes	no	0
GmaPHAS13g100783712.2@21#1	13	30329813	30330340	LOC100783712	XM_006594323.4	mRNA	713	1240	1.1741300498507292e-22	133.762	0.711	putative disease resistance protein At3g14460 isoform X2	PG,HC,PC,HG	HC130	128	yes	no	0
GmaPHAS13g100783712.2@21#2	13	30329877	30330761	LOC100783712	XM_006594323.4	mRNA	777	1661	5.272242752939295e-16	-	-	putative disease resistance protein At3g14460 isoform X2	HC	HC131	129	yes	no	0
GmaPHAS13g100798719.2@21#1	13	32870337	32870769	LOC100798719	XM_006594454.3	mRNA	3332	3477	3.2412280236745366e-07	23.021	0.974	auxin response factor 6 isoform X1	HC,PC	HC132	130	yes	yes	1
GmaPHAS14g100810798.1@21#1	14	2369528	2368840	LOC100810798	XM_006595701.4	mRNA	3077	3331	3.0098293367557996e-08	27.797	0.909	auxin response factor 6	HC,PC,HG	HC133	131	yes	yes	11
GmaPHAS14g100810798.1@21#2	14	2369030	2368713	LOC100810798	XM_006595701.4	mRNA	3141	3458	7.1239210736009115e-09	-	-	auxin response factor 6	HC	HC134	132	yes	yes	11
GmaPHAS14g100783388.1@21#1	14	28528788	28528557	LOC100783388	XM_006596144.4	mRNA	905	1136	1.1985915100632586e-07	-	-	disease resistance protein RPV1 isoform X1	HC,HG	HC135	133	yes	no	0
GmaPHAS15g100305356.2@21#1	15	14998222	14997802	LOC100305356	XM_006596872.4	mRNA	829	1249	7.950683515884875e-28	59.046	0.639	CC-NBS-LRR class disease resistance protein isoform X1	PG,HC,PC,HG	HC136	134	yes	yes	2
GmaPHAS15g100305356.2@21#2	15	14998076	14996912	LOC100305356	XM_006596872.4	mRNA	975	1313	4.6150902107106544e-17	-	-	CC-NBS-LRR class disease resistance protein isoform X1	HC	HC137	135	yes	no	0
GmaPHAS15g100305356.2@21#3	15	14996767	14996387	LOC100305356	XM_006596872.4	mRNA	1458	1838	3.5154796637738525e-08	16.648	0.474	CC-NBS-LRR class disease resistance protein isoform X1	PG,HC,HG	HC138	136	yes	no	0
GmaPHAS15g100796447.2@21#1	15	6971305	6970771	LOC100796447	XM_006597446.4	mRNA	3228	3480	0.00010299680932035123	19.9	0.895	auxin response factor 6 isoform X1	HC,PC	HC139	137	yes	no	0
GmaPHAS15g100796447.3@21#1	15	6971305	6970771	LOC100796447	XM_006597447.4	mRNA	3115	3367	0.00010299680932035123	19.9	0.895	auxin response factor 6 isoform X3	HC,PC	HC140	138	yes	no	0
GmaPHAS15g100792404.2@21#1	15	44673976	44673848	LOC100792404	XM_006598038.4	mRNA	562	690	6.69652872335334e-06	15.31	1.0	putative disease resistance protein At3g14460 isoform X2	PG,HC,HG	HC141	139	yes	no	0
GmaPHAS16g100780890.1@21#1	16	1452317	1453348	LOC100780890	XM_006598797.4	mRNA	855	1464	1.659499427099317e-10	205.011	0.524	NAC domain-containing protein 69	PG,HC,PC,HG	HC142	140	yes	yes	2
GmaPHAS16g100780890.1@21#2	16	1452318	1453076	LOC100780890	XM_006598797.4	mRNA	856	1192	1.697031717880303e-07	-	-	NAC domain-containing protein 69	HC	HC143	141	yes	yes	2
GmaPHAS16g100780890.1@21#3	16	1452391	1453088	LOC100780890	XM_006598797.4	mRNA	929	1204	2.314602691305482e-08	-	-	NAC domain-containing protein 69	HC	HC144	142	yes	yes	1
GmaPHAS16g100815486.1@21#1	16	3162547	3162440	LOC100815486	XM_006598884.4	mRNA	3543	3650	1.6593862306251296e-07	20.383	1.0	TMV resistance protein N isoform X1	PG,HC,PC,HG	HC145	143	yes	no	0
GmaPHAS16g100815486.1@21#2	16	3161893	3161683	LOC100815486	XM_006598884.4	mRNA	4197	4407	0.00018351607205061544	-	-	TMV resistance protein N isoform X1	HC	HC146	144	yes	no	0
GmaPHAS16g100815486.2@21#1	16	3162547	3162440	LOC100815486	XM_006598886.4	mRNA	1839	1946	1.6593862306251296e-07	20.383	1.0	TMV resistance protein N isoform X1	PG,HC,PC,HG	HC147	145	yes	no	0
GmaPHAS16g100815486.2@21#2	16	3161893	3161683	LOC100815486	XM_006598886.4	mRNA	2493	2703	0.00018351607205061544	-	-	TMV resistance protein N isoform X1	HC	HC148	146	yes	no	0
GmaPHAS16g100815486.3@21#1	16	3162547	3162440	LOC100815486	XM_006598887.3	mRNA	807	914	1.6593862306251296e-07	20.383	1.0	TMV resistance protein N isoform X2	PG,HC,PC,HG	HC149	147	yes	no	0
GmaPHAS16g100815486.3@21#2	16	3161893	3161683	LOC100815486	XM_006598887.3	mRNA	1461	1671	0.00018351607205061544	-	-	TMV resistance protein N isoform X2	HC	HC150	148	yes	no	0
GmaPHAS16g100815297.1@21#1	16	10589059	10587612	LOC100815297	XM_006599100.4	mRNA	209	736	5.8574803923051686e-21	134.175	0.757	disease resistance protein RUN1	PG,HC,PC,HG	HC151	149	yes	no	0
GmaPHAS16g100815297.1@21#2	16	10588974	10587569	LOC100815297	XM_006599100.4	mRNA	294	779	1.2810913703307975e-08	-	-	disease resistance protein RUN1	HC	HC152	150	yes	no	0
GmaPHAS16g100815297.1@21#3	16	10587541	10587205	LOC100815297	XM_006599100.4	mRNA	807	1143	2.3731487427140904e-09	-	-	disease resistance protein RUN1	HC,HG	HC153	151	yes	no	0
GmaPHAS16g102663208.1@21#1	16	29931996	29932250	LOC102663208	XM_006599319.4	mRNA	549	803	9.253662739367546e-05	58.923	0.484	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	PG,HC,HG	HC154	152	yes	no	0
GmaPHAS16g102663208.1@21#2	16	29932133	29932385	LOC102663208	XM_006599319.4	mRNA	686	938	2.5740970037721145e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	HC	HC155	153	yes	no	0
GmaPHAS16g100812093.1@21#1	16	32302349	32302624	LOC100812093	XM_006599408.4	mRNA	410	685	4.557149553060341e-08	24.429	0.86	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	PG,HC,PC,HG	HC156	154	yes	no	0
GmaPHAS16g100812093.1@21#2	16	32302740	32302906	LOC100812093	XM_006599408.4	mRNA	801	967	0.00021467121359237427	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC,HG	HC157	155	yes	no	0
GmaPHAS16g100812093.1@21#3	16	32302762	32303161	LOC100812093	XM_006599408.4	mRNA	823	1222	3.969431293043118e-07	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC158	156	yes	no	0
GmaPHAS16g100813712.1@21#1	16	32312328	32312727	LOC100813712	XM_006599409.4	mRNA	610	1009	2.0831157636685346e-13	49.966	0.451	pentatricopeptide repeat-containing protein At1g12775, mitochondrial	PG,HC,PC,HG	HC159	157	yes	yes	2
GmaPHAS16g100813712.1@21#2	16	32312348	32312686	LOC100813712	XM_006599409.4	mRNA	630	968	1.875882607844766e-11	-	-	pentatricopeptide repeat-containing protein At1g12775, mitochondrial	HC	HC160	158	yes	no	0
GmaPHAS16g100818504.1@21#1	16	32636156	32636347	LOC100818504	XM_006599424.4	mRNA	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial	PG,HC,PC,HG	HC161	159	yes	no	0
GmaPHAS16g100818504.1@21#2	16	32636548	32636695	LOC100818504	XM_006599424.4	mRNA	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial	HG	HG217	160	yes	no	0
GmaPHAS16g100786237.1@21#1	16	36099930	36099804	LOC100786237	XM_006599565.4	mRNA	828	954	0.00012414414207638453	52.53	0.728	pentatricopeptide repeat-containing protein At1g62910	PG,HC,PC,HG	HC162	161	yes	no	0
GmaPHAS16g100786237.1@21#2	16	36099927	36099761	LOC100786237	XM_006599565.4	mRNA	831	997	0.00013539604703747995	-	-	pentatricopeptide repeat-containing protein At1g62910	HC	HC163	162	yes	no	0
GmaPHAS18g100499631.1@21#1	18	56984713	56984501	LOC100499631	XM_006601685.4	mRNA	847	1059	3.749719190196253e-11	25.142	0.96	NBS-LRR disease-resistance protein scn3r1 isoform X2	PG,HC,PC,HG	HC164	163	yes	no	0
GmaPHAS19g548035.2@21#1	19	9158930	9158592	LOC548035	XM_006603691.4	mRNA	339	677	7.186001085367095e-15	41.33	0.894	resistance protein KR1 isoform X2	HC,PC,HG	HC165	164	yes	no	0
GmaPHAS19g100780257.1@21#1	19	2578629	2578167	LOC100780257	XM_006603803.3	mRNA	782	1244	2.5664027143804768e-11	-	-	TMV resistance protein N	HC,HG	HC166	165	yes	no	0
GmaPHAS19g100780257.1@21#2	19	2578429	2578177	LOC100780257	XM_006603803.3	mRNA	982	1234	1.918302334086134e-05	-	-	TMV resistance protein N	HC	HC167	166	yes	no	0
GmaPHAS19g100784366.1@21#1	19	9121272	9121400	LOC100784366	XM_006603940.4	mRNA	923	1051	6.501484197430428e-08	22.483	1.0	TMV resistance protein N isoform X1	HC,PC,HG	HC168	167	yes	no	0
GmaPHAS19g100784366.2@21#1	19	9121272	9121400	LOC100784366	XM_006603941.4	mRNA	923	1051	6.501484197430428e-08	22.483	1.0	disease resistance protein RPV1 isoform X2	HC,PC,HG	HC169	168	yes	no	0
GmaPHAS19g100784366.3@21#1	19	9121272	9121400	LOC100784366	XM_006603943.3	mRNA	261	389	6.501484197430428e-08	22.483	1.0	TMV resistance protein N isoform X4	HC,PC,HG	HC170	169	yes	no	0
GmaPHAS19g100786131.1@21#1	19	40297053	40296843	LOC100786131	XM_006604286.3	mRNA	937	1147	1.1985915100632586e-07	21.228	1.0	disease resistance protein RGA2	PG,HC,HG	HC171	170	yes	no	0
GmaPHAS20g100796554.1@21#1	20	45121794	45121964	LOC100796554	XM_006606349.4	mRNA	1308	1478	1.9049463462852514e-06	16.243	0.94	uncharacterized protein LOC100796554	PG,HC,PC,HG	HC172	171	yes	no	0
GmaPHAS20g100796554.2@21#1	20	45121794	45121964	LOC100796554	XM_006606350.4	mRNA	1282	1452	1.9049463462852514e-06	16.243	0.94	uncharacterized protein LOC100796554	PG,HC,PC,HG	HC173	172	yes	no	0
GmaPHAS9g100792448.4@21#1	9	2040078	2038231	LOC100792448	XM_014761864.2	mRNA	2970	3392	6.603955620773626e-27	118.065	0.852	endoribonuclease Dicer homolog 2 isoform X4	PG,HC,PC,HG	HC174	173	yes	yes	2
GmaPHAS9g100792448.4@21#2	9	2039454	2037776	LOC100792448	XM_014761864.2	mRNA	3055	3603	2.3746916892185813e-20	-	-	endoribonuclease Dicer homolog 2 isoform X4	HC	HC175	174	yes	yes	2
GmaPHAS9g100783968.1@21#1	9	31165	31373	LOC100783968	XM_014762233.3	mRNA	443	651	0.00034900928976098463	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC176	175	yes	no	0
GmaPHAS9g106794624.1@21#1	9	41220743	41220535	LOC106794624	XM_014762238.3	mRNA	497	705	5.370607622309343e-08	15.33	0.509	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	PG,HC,PC,HG	HC177	176	yes	no	0
GmaPHAS13g100806158.1@21#1	13	29274536	29274093	LOC100806158	XM_014765645.3	mRNA	855	1298	5.63514850971057e-28	88.646	0.766	putative disease resistance protein At3g14460 isoform X1	PG,HC,PC,HG	HC178	177	yes	yes	3
GmaPHAS13g100806158.1@21#2	13	29274470	29274029	LOC100806158	XM_014765645.3	mRNA	921	1362	1.8578122406476853e-13	-	-	putative disease resistance protein At3g14460 isoform X1	HC	HC179	178	yes	yes	3
GmaPHAS13g547607.1@21#1	13	30140954	30141565	LOC547607	XM_014765683.3	mRNA	1318	1929	1.9819464489560637e-20	167.42	0.685	putative disease resistance protein At3g14460	PG,HC,PC,HG	HC180	179	yes	no	0
GmaPHAS13g547607.1@21#2	13	30140974	30142194	LOC547607	XM_014765683.3	mRNA	1338	2558	4.204273960937412e-21	-	-	putative disease resistance protein At3g14460	HC	HC181	180	yes	no	0
GmaPHAS14g100787796.1@21#1	14	47298886	47298760	LOC100787796	XM_014766534.3	mRNA	637	763	1.015950753443957e-08	-	-	disease resistance protein RPP13	HC,HG	HC182	181	yes	no	0
GmaPHAS14g100787796.1@21#2	14	47298682	47298512	LOC100787796	XM_014766534.3	mRNA	841	1011	2.3768824842071167e-08	24.011	0.828	disease resistance protein RPP13	PG,HC,PC,HG	HC183	182	yes	no	0
GmaPHAS14g100783388.2@21#1	14	28528788	28528557	LOC100783388	XM_014767231.3	mRNA	913	1144	1.1985915100632586e-07	-	-	disease resistance protein RPV1 isoform X2	HC,HG	HC184	183	yes	no	0
GmaPHAS2g100775579.3@21#1	2	17550171	17550087	LOC100775579	XM_014767466.3	mRNA	916	1000	3.2220960005818184e-06	-	-	probable mediator of RNA polymerase II transcription subunit 26b isoform X2	HC	HC185	184	yes	yes	10
GmaPHAS15g102665383.1@21#1	15	44448074	44447801	LOC102665383	XM_014767478.3	mRNA	731	1004	2.420715885936356e-09	28.223	0.801	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC186	185	yes	yes	1
GmaPHAS15g102665383.1@21#2	15	44447968	44447674	LOC102665383	XM_014767478.3	mRNA	837	1131	4.782017875458205e-11	-	-	disease resistance protein RUN1 isoform X1	HC	HC187	186	yes	yes	1
GmaPHAS15g102665383.2@21#1	15	44448074	44447801	LOC102665383	XM_014767479.3	mRNA	710	983	2.420715885936356e-09	28.223	0.801	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC188	187	yes	yes	1
GmaPHAS15g102665383.2@21#2	15	44447968	44447674	LOC102665383	XM_014767479.3	mRNA	816	1110	4.782017875458205e-11	-	-	disease resistance protein RUN1 isoform X1	HC	HC189	188	yes	yes	1
GmaPHAS15g100792945.1@21#1	15	14806778	14806883	LOC100792945	XM_014767915.3	mRNA	183	288	0.00036173146418284327	16.25	1.0	calcium-transporting ATPase 8, plasma membrane-type	PG,HC,PC,HG	HC190	189	yes	no	0
GmaPHAS15g100792945.2@21#1	15	14806778	14806883	LOC100792945	XM_014767917.3	mRNA	64	169	0.00036173146418284327	16.25	1.0	calcium-transporting ATPase 8, plasma membrane-type	PG,HC,PC,HG	HC191	190	yes	no	0
GmaPHAS16g778089.2@21#1	16	37693269	37692952	LOC778089	XM_014768946.3	mRNA	1144	1461	3.345041746845074e-10	36.007	0.549	protein REVEILLE 7 isoform X2	PG,HC,PC,HG	HC192	191	yes	no	0
GmaPHAS16g778089.2@21#2	16	37693268	37692804	LOC778089	XM_014768946.3	mRNA	1145	1609	4.011414826611178e-13	-	-	protein REVEILLE 7 isoform X2	HC	HC193	192	yes	no	0
GmaPHAS16g102668900.1@21#1	16	35898182	35898056	LOC102668900	XM_014769018.3	mRNA	1060	1186	9.391458302027444e-05	52.55	0.729	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	PG,HC,PC,HG	HC194	193	yes	no	0
GmaPHAS16g102668900.1@21#2	16	35898179	35898013	LOC102668900	XM_014769018.3	mRNA	1063	1229	4.553883302085188e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	HC	HC195	194	yes	no	0
GmaPHAS16g102668900.1@21#3	16	35903153	35903592	LOC102668900	XM_014769018.3	mRNA	-	-	4.5340687147776146e-21	57.183	0.715	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	PG,HG	HG220	195	yes	no	0
GmaPHAS16g102668900.1@21#4	16	35903469	35903614	LOC102668900	XM_014769018.3	mRNA	-	-	5.406521571390036e-08	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	HG	HG221	196	yes	no	0
GmaPHAS16g102668900.1@21#5	16	35908908	35909347	LOC102668900	XM_014769018.3	mRNA	-	-	9.727533465697074e-16	38.622	0.787	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	PG,HG	HG222	197	yes	no	0
GmaPHAS16g102668900.1@21#6	16	35909096	35909369	LOC102668900	XM_014769018.3	mRNA	-	-	3.0502805058272392e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X1	HG	HG223	198	yes	no	0
GmaPHAS16g102668900.2@21#1	16	35898182	35898056	LOC102668900	XM_014769019.3	mRNA	1060	1186	9.391458302027444e-05	52.55	0.729	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	PG,HC,PC,HG	HC196	199	yes	no	0
GmaPHAS16g102668900.2@21#2	16	35898179	35898013	LOC102668900	XM_014769019.3	mRNA	1063	1229	4.553883302085188e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	HC	HC197	200	yes	no	0
GmaPHAS16g102668900.2@21#3	16	35903153	35903592	LOC102668900	XM_014769019.3	mRNA	-	-	4.5340687147776146e-21	57.183	0.715	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	PG,HG	HG220	201	yes	no	0
GmaPHAS16g102668900.2@21#4	16	35903469	35903614	LOC102668900	XM_014769019.3	mRNA	-	-	5.406521571390036e-08	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	HG	HG221	202	yes	no	0
GmaPHAS16g102668900.2@21#5	16	35908908	35909347	LOC102668900	XM_014769019.3	mRNA	-	-	9.727533465697074e-16	38.622	0.787	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	PG,HG	HG222	203	yes	no	0
GmaPHAS16g102668900.2@21#6	16	35909096	35909369	LOC102668900	XM_014769019.3	mRNA	-	-	3.0502805058272392e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	HG	HG223	204	yes	no	0
GmaPHAS16g102668900.3@21#1	16	35909370	35909097	LOC102668900	XM_014769020.3	mRNA	1041	1314	3.049963337021325e-05	39.309	0.801	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X3	PG,HC,PC,HG	HC198	205	yes	no	0
GmaPHAS16g102668900.3@21#2	16	35909348	35909161	LOC102668900	XM_014769020.3	mRNA	1063	1250	4.787410111112512e-06	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X3	HC	HC199	206	yes	no	0
GmaPHAS16g106796564.1@21#1	16	35903615	35903323	LOC106796564	XM_014769021.3	mRNA	810	1102	6.089743770911026e-07	52.356	0.725	pentatricopeptide repeat-containing protein At1g62910	PG,HC,PC,HG	HC200	207	yes	no	0
GmaPHAS16g106796564.1@21#2	16	35903593	35903089	LOC106796564	XM_014769021.3	mRNA	832	1336	7.524567550054665e-17	-	-	pentatricopeptide repeat-containing protein At1g62910	HC	HC201	208	yes	no	0
GmaPHAS19g100794422.1@21#1	19	40516157	40516495	LOC100794422	XM_014771766.3	mRNA	843	1181	4.93585659870827e-23	57.532	0.915	putative disease resistance protein RGA3	PG,HC,PC,HG	HC202	209	yes	no	0
GmaPHAS19g100794422.2@21#1	19	40516157	40516495	LOC100794422	XM_014771767.2	mRNA	843	1181	4.93585659870827e-23	57.532	0.915	putative disease resistance protein RGA3	PG,HC,PC,HG	HC203	210	yes	no	0
GmaPHAS3g102668720.1@21#1	3	4242319	4242044	LOC102668720	XM_014773475.3	mRNA	984	1259	7.472756071265849e-08	17.102	0.666	putative disease resistance RPP13-like protein 1	PG,HC,PC,HG	HC204	211	yes	no	0
GmaPHAS4g100781872.3@21#1	4	20207175	20207742	LOC100781872	XM_014774671.2	mRNA	901	1468	2.6701648477191018e-20	78.439	0.777	putative disease resistance protein RGA4	PG,HC,PC,HG	HC205	212	yes	yes	4
GmaPHAS4g100781872.3@21#2	4	20207384	20207743	LOC100781872	XM_014774671.2	mRNA	1110	1469	1.2874050654638815e-11	-	-	putative disease resistance protein RGA4	HC	HC206	213	yes	no	0
GmaPHAS6g100814903.1@21#1	6	43194579	43194411	LOC100814903	XM_014776716.3	mRNA	725	893	1.1985915100632586e-07	17.188	1.0	probable disease resistance protein At4g27220	HC,PC,HG	HC207	214	yes	no	0
GmaPHAS6g100814903.2@21#1	6	43194579	43194411	LOC100814903	XM_014776717.3	mRNA	725	893	1.1985915100632586e-07	17.188	1.0	probable disease resistance protein At4g27220	HC,PC,HG	HC208	215	yes	no	0
GmaPHAS6g100814903.3@21#1	6	43194579	43194411	LOC100814903	XM_014776718.3	mRNA	725	893	1.1985915100632586e-07	17.188	1.0	probable disease resistance protein At4g27220	HC,PC,HG	HC209	216	yes	no	0
GmaPHAS8g100808341.1@21#1	8	11384603	11384752	LOC100808341	XM_014778557.3	mRNA	187	336	1.1611860383297908e-05	-	-	nuclear transcription factor Y subunit C-2	HC	HC210	217	yes	no	0
GmaPHAS9g102668851.1@21#1	9	40840547	40840755	LOC102668851	XM_026123801.2	mRNA	337	545	2.603155643267516e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC,HG	HC211	218	yes	no	0
GmaPHAS9g100786599.2@21#1	9	41010599	41010391	LOC100786599	XM_026123804.2	mRNA	381	589	1.340943811869525e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial isoform X2	HC	HC212	219	yes	no	0
GmaPHAS9g100781818.1@21#1	9	40997998	40997790	LOC100781818	XM_026123805.2	mRNA	381	589	1.340943811869525e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC213	220	yes	no	0
GmaPHAS13g100804921.1@21#1	13	29621470	29621890	LOC100804921	XM_026125048.2	mRNA	739	1159	2.3730262135371978e-25	78.396	0.787	putative disease resistance RPP13-like protein 1	PG,HC,PC,HG	HC214	221	yes	yes	3
GmaPHAS13g100804921.1@21#2	13	29621576	29621977	LOC100804921	XM_026125048.2	mRNA	845	1246	1.8377593674654942e-10	-	-	putative disease resistance RPP13-like protein 1	HC	HC215	222	yes	no	0
GmaPHAS15g547639.1@21#1	15	44498337	44498209	LOC547639	XM_026125703.2	mRNA	605	733	6.69652872335334e-06	15.31	1.0	putative disease resistance RPP13-like protein 1 isoform X1	PG,HC,HG	HC216	223	yes	no	0
GmaPHAS16g547562.2@21#1	16	29566771	29566349	LOC547562	XM_026126006.2	mRNA	868	1290	8.010799469193138e-16	32.409	0.629	resistance protein MG23 isoform X1	HC,PC,HG	HC217	224	yes	no	0
GmaPHAS16g547562.2@21#2	16	29566709	29566499	LOC547562	XM_026126006.2	mRNA	930	1140	8.878539322201851e-06	-	-	resistance protein MG23 isoform X1	HC	HC218	225	yes	no	0
GmaPHAS16g547562.2@21#3	16	29566444	29566171	LOC547562	XM_026126006.2	mRNA	1195	1468	8.548762164657602e-05	-	-	resistance protein MG23 isoform X1	HC	HC219	226	yes	no	0
GmaPHAS16g102663208.2@21#1	16	29931996	29932250	LOC102663208	XM_026126010.2	mRNA	413	667	9.253662739367546e-05	58.923	0.484	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	PG,HC,HG	HC220	227	yes	no	0
GmaPHAS16g102663208.2@21#2	16	29932133	29932385	LOC102663208	XM_026126010.2	mRNA	550	802	2.5740970037721145e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial isoform X2	HC	HC221	228	yes	no	0
GmaPHAS16g100807994.2@21#1	16	37185835	37186547	LOC100807994	XM_026126079.2	mRNA	1026	1738	1.0978011934235508e-11	-	-	TMV resistance protein N isoform X2	HC,HG	HC222	229	yes	no	0
GmaPHAS16g100807994.2@21#2	16	37185918	37186403	LOC100807994	XM_026126079.2	mRNA	1109	1594	3.567860446666735e-17	-	-	TMV resistance protein N isoform X2	HC	HC223	230	yes	no	0
GmaPHAS16g100807994.2@21#3	16	37185973	37186204	LOC100807994	XM_026126079.2	mRNA	1164	1395	0.00010995383798920207	-	-	TMV resistance protein N isoform X2	HC	HC224	231	yes	no	0
GmaPHAS16g100807994.3@21#1	16	37185835	37186547	LOC100807994	XM_026126080.2	mRNA	1026	1738	1.0978011934235508e-11	-	-	TMV resistance protein N isoform X4	HC,HG	HC225	232	yes	no	0
GmaPHAS16g100807994.3@21#2	16	37185918	37186403	LOC100807994	XM_026126080.2	mRNA	1109	1594	3.567860446666735e-17	-	-	TMV resistance protein N isoform X4	HC	HC226	233	yes	no	0
GmaPHAS16g100807994.3@21#3	16	37185973	37186204	LOC100807994	XM_026126080.2	mRNA	1164	1395	0.00010995383798920207	-	-	TMV resistance protein N isoform X4	HC	HC227	234	yes	no	0
GmaPHAS16g112997677.1@21#1	16	35945226	35945350	LOC112997677	XM_026126192.2	mRNA	1093	1217	3.938480128284e-07	36.274	0.76	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC228	235	yes	no	0
GmaPHAS16g112997677.1@21#2	16	35945248	35945477	LOC112997677	XM_026126192.2	mRNA	1115	1344	3.7893379894974465e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC229	236	yes	no	0
GmaPHAS16g112997677.2@21#1	16	35945226	35945350	LOC112997677	XM_026126193.2	mRNA	1093	1217	3.938480128284e-07	36.274	0.76	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC230	237	yes	no	0
GmaPHAS16g112997677.2@21#2	16	35945248	35945477	LOC112997677	XM_026126193.2	mRNA	1115	1344	3.7893379894974465e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC231	238	yes	no	0
GmaPHAS16g112999808.1@21#1	16	35954535	35954638	LOC112999808	XM_026126199.2	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC232	239	yes	no	0
GmaPHAS16g112999808.1@21#2	16	35954536	35954767	LOC112999808	XM_026126199.2	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC233	240	yes	no	0
GmaPHAS16g112999808.2@21#1	16	35954535	35954638	LOC112999808	XM_026126200.2	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC234	241	yes	no	0
GmaPHAS16g112999808.2@21#2	16	35954536	35954767	LOC112999808	XM_026126200.2	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC235	242	yes	no	0
GmaPHAS17g112997603.1@21#1	17	19767815	19768542	LOC112997603	XM_026126319.2	mRNA	711	942	7.22509116622448e-06	-	-	probable disease resistance protein At5g66900 isoform X1	HC	HC236	243	yes	yes	1
GmaPHAS17g112997603.2@21#1	17	19767815	19768542	LOC112997603	XM_026126320.2	mRNA	709	940	7.22509116622448e-06	-	-	probable disease resistance protein At5g66900 isoform X2	HC	HC237	244	yes	yes	1
GmaPHAS17g112997603.3@21#1	17	19767815	19768542	LOC112997603	XM_026126321.2	mRNA	660	891	7.22509116622448e-06	-	-	probable disease resistance protein At5g66900 isoform X3	HC	HC238	245	yes	yes	1
GmaPHAS17g112997603.4@21#1	17	19767815	19768542	LOC112997603	XM_026126322.2	mRNA	720	951	7.22509116622448e-06	-	-	probable disease resistance protein At5g66900 isoform X3	HC	HC239	246	yes	yes	1
GmaPHAS18g100790719.1@21#1	18	56679779	56679399	LOC100790719	XM_026126913.2	mRNA	922	1302	1.3095633970512658e-23	60.12	0.838	putative disease resistance RPP13-like protein 3	PG,HC,PC,HG	HC240	247	yes	no	0
GmaPHAS19g548035.3@21#1	19	9158930	9158592	LOC548035	XM_026126955.2	mRNA	794	1132	7.186001085367095e-15	41.33	0.894	resistance protein KR1 isoform X1	HC,PC,HG	HC241	248	yes	no	0
GmaPHAS20g100796554.3@21#1	20	45121794	45121964	LOC100796554	XM_026127304.2	mRNA	1055	1225	1.9049463462852514e-06	16.243	0.94	uncharacterized protein LOC100796554	PG,HC,PC,HG	HC242	249	yes	no	0
GmaPHASng106797945.1@21#1	n	10484	10864	LOC106797945	XM_026127659.2	mRNA	687	1067	1.265748230834524e-22	48.457	0.789	disease resistance protein RPP13	PG,HC,PC,HG	HC243	250	yes	no	0
GmaPHAS5g100777789.1@21#1	5	33796477	33795879	LOC100777789	XM_026128469.2	mRNA	3406	3805	4.0927954703948015e-12	57.341	0.662	auxin response factor 6 isoform X2	PG,HC,PC,HG	HC244	251	yes	no	0
GmaPHAS5g100777789.1@21#2	5	33796392	33795920	LOC100777789	XM_026128469.2	mRNA	3491	3764	3.1909738282223576e-11	-	-	auxin response factor 6 isoform X2	HC	HC245	252	yes	no	0
GmaPHAS6g100814717.2@21#1	6	44683683	44683895	LOC100814717	XM_026128985.2	mRNA	1152	1364	1.826954622846736e-10	48.617	0.956	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC246	253	yes	no	0
GmaPHAS9g100101861.2@21#1	9	40118538	40118286	LOC100101861	XM_041004974.1	mRNA	1040	1292	4.644828957425429e-11	35.634	0.435	protein REVEILLE 7 isoform X2	PG,HC,PC,HG	HC247	254	yes	no	0
GmaPHAS9g100101861.2@21#2	9	40118537	40118157	LOC100101861	XM_041004974.1	mRNA	1041	1421	5.898442200039373e-10	-	-	protein REVEILLE 7 isoform X2	HC	HC248	255	yes	no	0
GmaPHAS9g100101861.3@21#1	9	40118538	40118286	LOC100101861	XM_041004975.1	mRNA	985	1237	4.644828957425429e-11	35.634	0.435	protein REVEILLE 7 isoform X2	PG,HC,PC,HG	HC249	256	yes	no	0
GmaPHAS9g100101861.3@21#2	9	40118537	40118157	LOC100101861	XM_041004975.1	mRNA	986	1366	5.898442200039373e-10	-	-	protein REVEILLE 7 isoform X2	HC	HC250	257	yes	no	0
GmaPHAS9g102668851.2@21#1	9	40840547	40840755	LOC102668851	XM_041004998.1	mRNA	338	546	2.603155643267516e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC,HG	HC251	258	yes	yes	1
GmaPHAS9g100782898.1@21#1	9	40909645	40909853	LOC100782898	XM_041004999.1	mRNA	293	501	2.603155643267516e-05	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	HC	HC252	259	yes	yes	1
GmaPHAS9g100805537.2@21#1	9	2059455	2059038	LOC100805537	XM_041005324.1	mRNA	2180	2514	3.8923271807935893e-13	47.888	0.984	endoribonuclease Dicer homolog 2 isoform X1	PG,HC,PC,HG	HC253	260	yes	no	0
GmaPHAS9g100820121.3@21#1	9	5734936	5735104	LOC100820121	XM_041005398.1	mRNA	79	247	2.2370409210379645e-12	34.383	1.0	calcium-transporting ATPase 8, plasma membrane-type	PG,HC,PC,HG	HC254	262	yes	no	0
GmaPHAS2g100795618.2@21#1	2	46534620	46534376	LOC100795618	XM_041006191.1	mRNA	1082	1250	0.00019746440151535645	-	-	uncharacterized protein LOC100795618 isoform X1	HC	HC255	263	yes	no	0
GmaPHAS1g547567.2@21#1	1	53932244	53932095	LOC547567	XM_041006884.1	mRNA	515	664	2.2370409210379645e-12	34.135	1.0	plasma membrane Ca2+-ATPase isoform X1	PG,HC,PC,HG	HC256	264	yes	no	0
GmaPHAS13g100806158.2@21#1	13	29274536	29274093	LOC100806158	XM_041008208.1	mRNA	855	1298	5.63514850971057e-28	88.646	0.766	putative disease resistance protein At3g14460 isoform X2	PG,HC,PC,HG	HC257	265	yes	yes	3
GmaPHAS13g100806158.2@21#2	13	29274470	29274029	LOC100806158	XM_041008208.1	mRNA	921	1362	1.8578122406476853e-13	-	-	putative disease resistance protein At3g14460 isoform X2	HC	HC258	266	yes	yes	3
GmaPHAS13g102661203.1@21#1	13	29290276	29289665	LOC102661203	XM_041008210.1	mRNA	839	1450	6.864540137958403e-21	158.386	0.679	putative disease resistance protein At3g14460 isoform X1	PG,HC,PC,HG	HC259	267	yes	no	0
GmaPHAS13g102661203.1@21#2	13	29290256	29289223	LOC102661203	XM_041008210.1	mRNA	859	1892	1.2102266469887773e-19	-	-	putative disease resistance protein At3g14460 isoform X1	HC	HC260	268	yes	no	0
GmaPHAS13g102661203.2@21#1	13	29290276	29289665	LOC102661203	XM_041008211.1	mRNA	842	1453	6.864540137958403e-21	158.386	0.679	putative disease resistance protein At3g14460 isoform X2	PG,HC,PC,HG	HC261	269	yes	no	0
GmaPHAS13g102661203.2@21#2	13	29290256	29289223	LOC102661203	XM_041008211.1	mRNA	862	1895	1.2102266469887773e-19	-	-	putative disease resistance protein At3g14460 isoform X2	HC	HC262	270	yes	no	0
GmaPHAS13g100779402.1@21#1	13	30079732	30079121	LOC100779402	XM_041008230.1	mRNA	843	1454	2.3983011427573264e-20	138.84	0.572	putative disease resistance protein At3g14460	PG,HC,PC,HG	HC263	271	yes	no	0
GmaPHAS13g100779402.1@21#2	13	30079710	30078639	LOC100779402	XM_041008230.1	mRNA	865	1936	1.9978162226732782e-10	-	-	putative disease resistance protein At3g14460	HC	HC264	272	yes	no	0
GmaPHAS13g100783712.3@21#1	13	30329813	30330340	LOC100783712	XM_041008232.1	mRNA	749	1276	1.1741300498507292e-22	133.762	0.711	putative disease resistance RPP13-like protein 1 isoform X1	PG,HC,PC,HG	HC265	273	yes	no	0
GmaPHAS13g100783712.3@21#2	13	30329877	30330761	LOC100783712	XM_041008232.1	mRNA	813	1697	5.272242752939295e-16	-	-	putative disease resistance RPP13-like protein 1 isoform X1	HC	HC266	274	yes	no	0
GmaPHAS14g100808660.2@21#1	14	47462768	47463106	LOC100808660	XM_041008811.1	mRNA	692	1030	2.0062772203902917e-11	18.281	0.824	uncharacterized protein LOC100808660 isoform X1	PG,HC,PC,HG	HC267	275	yes	no	0
GmaPHAS14g100807238.1@21#1	14	47447814	47448152	LOC100807238	XM_041008843.1	mRNA	434	772	2.0062772203902917e-11	18.281	0.824	probable O-methyltransferase 3	PG,HC,PC,HG	HC268	276	yes	no	0
GmaPHAS14g102659608.1@21#1	14	41101000	41101128	LOC102659608	XM_041009112.1	mRNA	120	248	0.00034900928976098463	-	-	serine/threonine-protein phosphatase 7 long form homolog	HC	HC269	277	yes	no	0
GmaPHAS15g102665383.3@21#1	15	44448074	44447801	LOC102665383	XM_041009676.1	mRNA	712	985	2.420715885936356e-09	28.223	0.801	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC270	278	yes	yes	1
GmaPHAS15g102665383.3@21#2	15	44447968	44447674	LOC102665383	XM_041009676.1	mRNA	818	1112	4.782017875458205e-11	-	-	disease resistance protein RUN1 isoform X1	HC	HC271	279	yes	yes	1
GmaPHAS16g547562.3@21#1	16	29566771	29566349	LOC547562	XM_041010198.1	mRNA	868	1290	8.010799469193138e-16	32.409	0.629	resistance protein MG23 isoform X2	HC,PC,HG	HC272	280	yes	no	0
GmaPHAS16g547562.3@21#2	16	29566709	29566499	LOC547562	XM_041010198.1	mRNA	930	1140	8.878539322201851e-06	-	-	resistance protein MG23 isoform X2	HC	HC273	281	yes	no	0
GmaPHAS16g547562.3@21#3	16	29566444	29566171	LOC547562	XM_041010198.1	mRNA	1195	1468	8.548762164657602e-05	-	-	resistance protein MG23 isoform X2	HC	HC274	282	yes	no	0
GmaPHAS16g547562.3@21#4	16	29566068	29565673	LOC547562	XM_041010198.1	mRNA	1571	1783	0.00031115518095056716	-	-	resistance protein MG23 isoform X2	HC	HC275	283	yes	no	0
GmaPHAS16g121173697.1@21#1	16	32084490	32084763	LOC121173697	XM_041010377.1	mRNA	4118	4391	0.00019985380014218932	-	-	uncharacterized protein LOC121173697	HC,HG	HC276	284	yes	no	0
GmaPHAS16g106796589.1@21#1	16	32361628	32361143	LOC106796589	XM_041010378.1	mRNA	591	1076	9.07947122198102e-19	52.616	0.379	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63080, mitochondrial	PG,HC,PC,HG	HC277	285	yes	no	0
GmaPHAS16g106796589.1@21#2	16	32361627	32361121	LOC106796589	XM_041010378.1	mRNA	592	1098	3.740339429446267e-18	-	-	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63080, mitochondrial	HC	HC278	286	yes	no	0
GmaPHAS16g106796589.1@21#3	16	32361236	32361112	LOC106796589	XM_041010378.1	mRNA	983	1107	0.00010875018124591805	-	-	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63080, mitochondrial	HC	HC279	287	yes	no	0
GmaPHAS16g106796589.1@21#4	16	32352584	32352267	LOC106796589	XM_041010378.1	mRNA	2311	2628	1.3920871928926309e-08	61.698	0.462	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63080, mitochondrial	PG,HC,HG	HC280	288	yes	no	0
GmaPHAS16g106796589.1@21#5	16	32352585	32352184	LOC106796589	XM_041010378.1	mRNA	2310	2711	4.86189745711745e-07	-	-	LOW QUALITY PROTEIN: pentatricopeptide repeat-containing protein At1g63080, mitochondrial	HC	HC281	289	yes	no	0
GmaPHAS16g100807278.1@21#1	16	32181855	32182025	LOC100807278	XM_041010530.1	mRNA	809	979	0.000335946729899413	34.659	0.434	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial	PG,HC,HG	HC282	290	yes	no	0
GmaPHAS16g112999808.3@21#1	16	35954535	35954638	LOC112999808	XM_041010604.1	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC283	291	yes	no	0
GmaPHAS16g112999808.3@21#2	16	35954536	35954767	LOC112999808	XM_041010604.1	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC284	292	yes	no	0
GmaPHAS16g112999808.4@21#1	16	35954535	35954638	LOC112999808	XM_041010605.1	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC285	293	yes	no	0
GmaPHAS16g112999808.4@21#2	16	35954536	35954767	LOC112999808	XM_041010605.1	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC286	294	yes	no	0
GmaPHAS16g112999808.5@21#1	16	35954535	35954638	LOC112999808	XM_041010606.1	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC287	295	yes	no	0
GmaPHAS16g112999808.5@21#2	16	35954536	35954767	LOC112999808	XM_041010606.1	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC288	296	yes	no	0
GmaPHAS16g112999808.6@21#1	16	35954535	35954638	LOC112999808	XM_041010607.1	mRNA	757	860	1.00306472951583e-05	26.798	0.819	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	PG,HC,PC,HG	HC289	297	yes	no	0
GmaPHAS16g112999808.6@21#2	16	35954536	35954767	LOC112999808	XM_041010607.1	mRNA	758	989	5.900041943837891e-06	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial-like	HC	HC290	298	yes	no	0
GmaPHAS16g100807994.4@21#1	16	37185835	37186547	LOC100807994	XM_041010650.1	mRNA	1026	1738	1.0978011934235508e-11	-	-	TMV resistance protein N isoform X3	HC,HG	HC291	299	yes	no	0
GmaPHAS16g100807994.4@21#2	16	37185918	37186403	LOC100807994	XM_041010650.1	mRNA	1109	1594	3.567860446666735e-17	-	-	TMV resistance protein N isoform X3	HC	HC292	300	yes	no	0
GmaPHAS16g100807994.4@21#3	16	37185973	37186204	LOC100807994	XM_041010650.1	mRNA	1164	1395	0.00010995383798920207	-	-	TMV resistance protein N isoform X3	HC	HC293	301	yes	no	0
GmaPHAS16g778089.3@21#1	16	37693269	37692952	LOC778089	XM_041010669.1	mRNA	1296	1613	3.345041746845074e-10	36.007	0.549	protein REVEILLE 7 isoform X1	PG,HC,PC,HG	HC294	302	yes	no	0
GmaPHAS16g778089.3@21#2	16	37693268	37692804	LOC778089	XM_041010669.1	mRNA	1297	1761	4.011414826611178e-13	-	-	protein REVEILLE 7 isoform X1	HC	HC295	303	yes	no	0
GmaPHAS16g778089.4@21#1	16	37693269	37692952	LOC778089	XM_041010670.1	mRNA	1267	1584	3.345041746845074e-10	36.007	0.549	protein REVEILLE 7 isoform X1	PG,HC,PC,HG	HC296	304	yes	no	0
GmaPHAS16g778089.4@21#2	16	37693268	37692804	LOC778089	XM_041010670.1	mRNA	1268	1732	4.011414826611178e-13	-	-	protein REVEILLE 7 isoform X1	HC	HC297	305	yes	no	0
GmaPHAS16g121173775.1@21#1	16	5754880	5754395	LOC121173775	XM_041010810.1	mRNA	396	881	1.2864320575619324e-07	177.453	0.551	uncharacterized protein LOC121173775	PG,HC,PC,HG	HC298	306	yes	no	0
GmaPHAS16g121173775.1@21#2	16	5754814	5754394	LOC121173775	XM_041010810.1	mRNA	462	882	3.0843822049338728e-06	-	-	uncharacterized protein LOC121173775	HC	HC299	307	yes	yes	1
GmaPHAS16g121173775.1@21#3	16	5753927	5753715	LOC121173775	XM_041010810.1	mRNA	1349	1561	7.061007163318183e-06	-	-	uncharacterized protein LOC121173775	HC,HG	HC300	308	yes	no	0
GmaPHAS18g100499631.2@21#1	18	56984713	56984501	LOC100499631	XM_041011587.1	mRNA	850	1062	3.749719190196253e-11	25.142	0.96	NBS-LRR disease-resistance protein scn3r1 isoform X1	PG,HC,PC,HG	HC301	309	yes	no	0
GmaPHAS19g100794422.3@21#1	19	40516157	40516495	LOC100794422	XM_041012533.1	mRNA	843	1181	4.93585659870827e-23	57.532	0.915	putative disease resistance protein RGA3	PG,HC,PC,HG	HC302	310	yes	no	0
GmaPHAS19g100784366.4@21#1	19	9121272	9121400	LOC100784366	XM_041012949.1	mRNA	340	468	6.501484197430428e-08	22.483	1.0	disease resistance protein RPV1 isoform X3	HC,PC,HG	HC303	311	yes	no	0
GmaPHAS3g100777231.1@21#1	3	4388415	4388268	LOC100777231	XM_041013838.1	mRNA	1155	1302	0.00019985380014218932	21.274	0.507	putative disease resistance protein At3g14460	PG,HC,HG	HC304	312	yes	no	0
GmaPHAS3g113001151.1@21#1	3	4087415	4087289	LOC113001151	XM_041013840.1	mRNA	990	1116	0.00017513967568394244	-	-	putative disease resistance RPP13-like protein 1	HC,HG	HC305	313	yes	no	0
GmaPHAS3g100786643.1@21#1	3	4753533	4753808	LOC100786643	XM_041013843.1	mRNA	1353	1628	2.385891005067611e-07	21.246	0.419	putative disease resistance protein At3g14460	PG,HC,HG	HC306	314	yes	no	0
GmaPHAS3g100806797.1@21#1	3	38490581	38490308	LOC100806797	XM_041013951.1	mRNA	2478	2751	1.4030088709910512e-05	-	-	calcium-transporting ATPase 12, plasma membrane-type	HC,HG	HC307	315	yes	no	0
GmaPHAS4g100781872.4@21#1	4	20207175	20207742	LOC100781872	XM_041014596.1	mRNA	901	1468	2.6701648477191018e-20	78.439	0.777	putative disease resistance protein RGA4	PG,HC,PC,HG	HC308	316	yes	yes	4
GmaPHAS4g100781872.4@21#2	4	20207384	20207743	LOC100781872	XM_041014596.1	mRNA	1110	1469	1.2874050654638815e-11	-	-	putative disease resistance protein RGA4	HC	HC309	317	yes	no	0
GmaPHAS5g100777789.2@21#1	5	33796477	33795879	LOC100777789	XM_041015491.1	mRNA	3409	3808	4.0927954703948015e-12	57.341	0.662	auxin response factor 6 isoform X1	PG,HC,PC,HG	HC310	318	yes	no	0
GmaPHAS5g100777789.2@21#2	5	33796392	33795920	LOC100777789	XM_041015491.1	mRNA	3494	3767	3.1909738282223576e-11	-	-	auxin response factor 6 isoform X1	HC	HC311	319	yes	no	0
GmaPHAS6g106798942.1@21#1	6	19209110	19209446	LOC106798942	XM_041016632.1	mRNA	932	1268	6.028460474892737e-08	19.923	0.492	toll/interleukin-1 receptor-like protein	PG,HC,PC,HG	HC312	320	yes	no	0
GmaPHAS6g106798942.1@21#2	6	19209132	19209447	LOC106798942	XM_041016632.1	mRNA	954	1269	0.00023679702719771664	-	-	toll/interleukin-1 receptor-like protein	HC	HC313	321	yes	no	0
GmaPHAS6g100814717.3@21#1	6	44683683	44683895	LOC100814717	XM_041016657.1	mRNA	1152	1364	1.826954622846736e-10	48.617	0.956	disease resistance protein RUN1 isoform X1	PG,HC,PC,HG	HC314	322	yes	no	0
GmaPHAS6g100814717.4@21#1	6	44683683	44683895	LOC100814717	XM_041016658.1	mRNA	1162	1374	1.826954622846736e-10	48.617	0.956	disease resistance protein RUN1 isoform X2	PG,HC,PC,HG	HC315	323	yes	no	0
GmaPHAS6g106799107.1@21#1	6	44826347	44826534	LOC106799107	XM_041016666.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC316	324	yes	no	0
GmaPHAS6g106799107.2@21#1	6	44826347	44826534	LOC106799107	XM_041016667.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC317	325	yes	no	0
GmaPHAS6g106799107.3@21#1	6	44826347	44826534	LOC106799107	XM_041016668.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC318	326	yes	no	0
GmaPHAS6g106799107.4@21#1	6	44826347	44826534	LOC106799107	XM_041016669.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC319	327	yes	no	0
GmaPHAS6g106799107.5@21#1	6	44826347	44826534	LOC106799107	XM_041016670.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC320	328	yes	no	0
GmaPHAS6g106799107.6@21#1	6	44826347	44826534	LOC106799107	XM_041016671.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC321	329	yes	no	0
GmaPHAS6g106799107.7@21#1	6	44826347	44826534	LOC106799107	XM_041016672.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC322	330	yes	no	0
GmaPHAS6g106799107.8@21#1	6	44826347	44826534	LOC106799107	XM_041016673.1	mRNA	930	1117	3.2220960005818184e-06	24.619	0.89	disease resistance protein RPV1	PG,HC,HG	HC323	331	yes	no	0
GmaPHAS8g121175239.1@21#1	8	36538541	36538247	LOC121175239	XM_041017773.1	mRNA	382	676	3.1861259983501056e-10	-	-	uncharacterized protein LOC121175239	HC	HC324	332	yes	no	0
GmaPHAS3g106798139.1@21#1	3	4003093	4003368	LOC106798139	XM_014774093.1	mRNA	-	-	1.4586580496462721e-05	-	-	putative disease resistance protein At3g14460	HG	HG13	333	yes	no	0
GmaPHAS3g106798139.1@21#2	3	4003258	4003407	LOC106798139	XM_014774093.1	mRNA	-	-	0.00021494210998851304	-	-	putative disease resistance protein At3g14460	HG	HG14	334	yes	no	0
GmaPHAS3g106794107.1@21#1	3	4311779	4311905	LOC106794107	XM_041013839.1	mRNA	-	-	3.270073995866254e-06	17.268	0.749	putative disease resistance RPP13-like protein 1	PG,HG	HG17	335	yes	no	0
GmaPHAS3g100784015.1@21#1	3	4702797	4702883	LOC100784015	XM_003521954.5	mRNA	-	-	0.00019985380014218932	17.164	0.945	putative disease resistance RPP13-like protein 1	PG,HG	HG19	336	yes	no	0
GmaPHAS3g100794060.1@21#1	3	4977424	4977615	LOC100794060	XM_014773486.3	mRNA	-	-	0.000288402356874658	-	-	putative disease resistance RPP13-like protein 1	HG	HG22	337	yes	no	0
GmaPHAS3g100816233.1@21#1	3	36457536	36457725	LOC100816233	XM_041014035.1	mRNA	-	-	8.084972887800737e-05	41.28	0.791	tRNA-uridine aminocarboxypropyltransferase 2 isoform X3	PG,HG	HG27	338	yes	no	0
GmaPHAS3g100816233.1@21#2	3	36457547	36457797	LOC100816233	XM_041014035.1	mRNA	-	-	0.0004292545149059525	-	-	tRNA-uridine aminocarboxypropyltransferase 2 isoform X3	HG	HG28	339	yes	no	0
GmaPHAS6g100785853.1@21#1	6	45319738	45319822	LOC100785853	XM_041016683.1	mRNA	-	-	1.9970289559669326e-05	21.272	1.0	uncharacterized protein LOC100785853	PG,HG	HG60	340	yes	no	0
GmaPHAS7g100816338.1@21#1	7	1965357	1965588	LOC100816338	XM_041017223.1	mRNA	-	-	0.00031115518095056716	-	-	probable cyclic nucleotide-gated ion channel 20, chloroplastic isoform X2	HG	HG64	341	yes	no	0
GmaPHAS12g102660364.1@21#1	12	14926879	14927091	LOC102660364	XM_041007696.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	342	yes	no	0
GmaPHAS12g102660364.2@21#1	12	14926879	14927091	LOC102660364	XM_041007692.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	343	yes	no	0
GmaPHAS12g102660364.3@21#1	12	14926879	14927091	LOC102660364	XM_041007690.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	344	yes	no	0
GmaPHAS12g102660364.4@21#1	12	14926879	14927091	LOC102660364	XM_041007700.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	345	yes	no	0
GmaPHAS12g102660364.5@21#1	12	14926879	14927091	LOC102660364	XM_041007702.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	346	yes	no	0
GmaPHAS12g102660364.6@21#1	12	14926879	14927091	LOC102660364	XM_041007699.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	347	yes	no	0
GmaPHAS12g102660364.7@21#1	12	14926879	14927091	LOC102660364	XM_041007701.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	348	yes	no	0
GmaPHAS12g102660364.8@21#1	12	14926879	14927091	LOC102660364	XM_041007695.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	349	yes	no	0
GmaPHAS12g102660364.9@21#1	12	14926879	14927091	LOC102660364	XM_041007693.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	350	yes	no	0
GmaPHAS12g102660364.10@21#1	12	14926879	14927091	LOC102660364	XM_041007698.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	351	yes	no	0
GmaPHAS12g102660364.11@21#1	12	14926879	14927091	LOC102660364	XM_041007691.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	352	yes	no	0
GmaPHAS12g102660364.12@21#1	12	14926879	14927091	LOC102660364	XM_041007697.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	353	yes	no	0
GmaPHAS12g102660364.13@21#1	12	14926879	14927091	LOC102660364	XM_041007694.1	mRNA	-	-	1.563104339888379e-05	-	-	disease resistance protein RUN1 isoform X1	HG	HG107	354	yes	no	0
GmaPHAS12g100811986.1@21#1	12	37556387	37556261	LOC100811986	XM_003539473.5	mRNA	834	960	0.00026715389986896223	17.741	0.627	coumaroyl-CoA:anthocyanidin 3-O-glucoside-6''-O-coumaroyltransferase 2	PG,PC,HG	PC36	355	yes	no	0
GmaPHAS13g100802804.1@21#1	13	29588716	29589138	LOC100802804	XM_026125049.2	mRNA	-	-	5.768120692056761e-24	76.091	0.733	SAC3 family protein C isoform X2	PG,HG	HG122	356	yes	no	0
GmaPHAS13g100802804.1@21#2	13	29588761	29589202	LOC100802804	XM_026125049.2	mRNA	-	-	1.7966600094329596e-12	-	-	SAC3 family protein C isoform X2	HG	HG123	357	yes	no	0
GmaPHAS15g102665383.4@21#1	15	44447694	44447967	LOC102665383	XM_041009677.1	mRNA	-	-	4.857431024035505e-11	27.624	0.784	toll/interleukin-1 receptor-like protein isoform X2	PG,HG	HG159	358	yes	no	0
GmaPHAS15g102665383.4@21#2	15	44447800	44448073	LOC102665383	XM_041009677.1	mRNA	-	-	1.7706878205401396e-11	-	-	toll/interleukin-1 receptor-like protein isoform X2	HG	HG160	359	yes	no	0
GmaPHAS15g102665383.5@21#1	15	44447694	44447967	LOC102665383	XM_014767480.3	mRNA	-	-	4.857431024035505e-11	27.624	0.784	toll/interleukin-1 receptor-like protein isoform X2	PG,HG	HG159	360	yes	no	0
GmaPHAS15g102665383.5@21#2	15	44447800	44448073	LOC102665383	XM_014767480.3	mRNA	-	-	1.7706878205401396e-11	-	-	toll/interleukin-1 receptor-like protein isoform X2	HG	HG160	361	yes	no	0
GmaPHAS15g547639.2@21#1	15	44498250	44498336	LOC547639	XM_041009690.1	mRNA	-	-	7.748688626696225e-05	15.31	1.0	putative disease resistance RPP13-like protein 1 isoform X2	PG,HG	HG161	362	yes	no	0
GmaPHAS15g100792404.3@21#1	15	44673889	44673975	LOC100792404	XM_041009689.1	mRNA	-	-	7.748688626696225e-05	15.31	1.0	putative disease resistance protein At3g14460 isoform X3	PG,HG	HG162	363	yes	no	0
GmaPHAS18g100499631.3@21#1	18	56984521	56984712	LOC100499631	NM_001250513.1	mRNA	-	-	2.1100785519450823e-09	25.142	0.96	NBS-LRR disease-resistance protein scn3r1	PG,HG	HG251	364	yes	no	0
GmaPHAS16g100818504.2@21#1	16	32636156	32636347	LOC100818504	XR_001385539.3	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X2	PG,HC,PC,HG	HC333	370	yes	no	0
GmaPHAS16g100818504.2@21#2	16	32636548	32636695	LOC100818504	XR_001385539.3	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X2	HG	HG217	371	yes	no	0
GmaPHAS3g100816241.2@21#1	3	42791246	42791393	LOC100816241	XR_001387588.2	transcript	1786	1933	6.501484197430428e-08	25.077	1.0	protein TRANSPORT INHIBITOR RESPONSE 1D, transcript variant X2	PG,HC,PC,HG	HC334	372	yes	yes	10
GmaPHAS6g100801558.1@21#1	6	42676593	42677498	LOC100801558	XR_001388786.3	transcript	822	1727	8.406587111208058e-06	86.746	0.411	putative disease resistance protein RGA4	PG,HC,PC,HG	HC335	373	yes	no	0
GmaPHAS6g100801558.1@21#2	6	42676829	42677291	LOC100801558	XR_001388786.3	transcript	1058	1520	3.514103314838911e-24	-	-	putative disease resistance protein RGA4	HC	HC336	374	yes	yes	4
GmaPHAS6g100792025.1@21#1	6	11888184	11889044	LOC100792025	XR_003267366.2	transcript	2	699	9.247764510292022e-08	186.08	0.36	toll/interleukin-1 receptor-like protein, transcript variant X3	PG,HC,PC,HG	HC337	375	yes	no	0
GmaPHAS6g100792025.1@21#2	6	11888185	11888586	LOC100792025	XR_003267366.2	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X3	HC	HC338	376	yes	no	0
GmaPHAS6g100792025.1@21#3	6	11888215	11888511	LOC100792025	XR_003267366.2	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X3	HC	HC339	377	yes	no	0
GmaPHAS6g100792025.1@21#4	6	11888499	11889021	LOC100792025	XR_003267366.2	transcript	317	676	3.0792809117844443e-08	-	-	toll/interleukin-1 receptor-like protein, transcript variant X3	HC	HC340	378	yes	no	0
GmaPHAS6g100792025.2@21#1	6	11888184	11889044	LOC100792025	XR_003267368.2	transcript	2	699	9.247764510292022e-08	186.08	0.36	toll/interleukin-1 receptor-like protein, transcript variant X2	PG,HC,PC,HG	HC341	379	yes	no	0
GmaPHAS6g100792025.2@21#2	6	11888185	11888586	LOC100792025	XR_003267368.2	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X2	HC	HC342	380	yes	no	0
GmaPHAS6g100792025.2@21#3	6	11888215	11888511	LOC100792025	XR_003267368.2	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X2	HC	HC343	381	yes	no	0
GmaPHAS6g100792025.2@21#4	6	11888499	11889021	LOC100792025	XR_003267368.2	transcript	317	676	3.0792809117844443e-08	-	-	toll/interleukin-1 receptor-like protein, transcript variant X2	HC	HC344	382	yes	no	0
GmaPHAS6g100792025.3@21#1	6	11888184	11889048	LOC100792025	XR_003267370.2	transcript	2	697	1.2735387302971955e-10	180.579	0.356	toll/interleukin-1 receptor-like protein, transcript variant X5	PG,HC,PC,HG	HC345	383	yes	no	0
GmaPHAS6g100792025.3@21#2	6	11888185	11888586	LOC100792025	XR_003267370.2	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X5	HC	HC346	384	yes	no	0
GmaPHAS6g100792025.3@21#3	6	11888215	11888511	LOC100792025	XR_003267370.2	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X5	HC	HC347	385	yes	no	0
GmaPHAS6g100792025.3@21#4	6	11888499	11888795	LOC100792025	XR_003267370.2	transcript	317	613	4.729277978781543e-08	-	-	toll/interleukin-1 receptor-like protein, transcript variant X5	HC	HC348	386	yes	no	0
GmaPHAS11g100788797.2@21#1	11	5373082	5372874	LOC100788797	XR_005887099.1	transcript	794	1002	2.4891698863676737e-14	49.154	1.0	disease resistance RPP8-like protein 3, transcript variant X2	PG,HC,PC,HG	HC349	387	yes	yes	2
GmaPHAS11g100788797.2@21#2	11	5372726	5372598	LOC100788797	XR_005887099.1	transcript	1150	1278	9.479163959853564e-05	-	-	disease resistance RPP8-like protein 3, transcript variant X2	HC	HC350	388	yes	no	0
GmaPHAS14g100783388.3@21#1	14	28528788	28528557	LOC100783388	XR_005888518.1	transcript	906	1137	1.1985915100632586e-07	-	-	disease resistance protein RPV1, transcript variant X2	HC,HG	HC367	389	yes	no	0
GmaPHAS16g100818504.3@21#1	16	32636156	32636347	LOC100818504	XR_005889061.1	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X3	PG,HC,PC,HG	HC368	390	yes	no	0
GmaPHAS16g100818504.3@21#2	16	32636548	32636695	LOC100818504	XR_005889061.1	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X3	HG	HG217	391	yes	no	0
GmaPHAS16g100818504.4@21#1	16	32636156	32636347	LOC100818504	XR_005889062.1	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X7	PG,HC,PC,HG	HC369	392	yes	no	0
GmaPHAS16g100818504.4@21#2	16	32636548	32636695	LOC100818504	XR_005889062.1	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X7	HG	HG217	393	yes	no	0
GmaPHAS3g100816241.3@21#1	3	42791246	42791393	LOC100816241	XR_005890646.1	transcript	1785	1932	6.501484197430428e-08	25.077	1.0	protein TRANSPORT INHIBITOR RESPONSE 1D, transcript variant X1	PG,HC,PC,HG	HC371	394	yes	yes	10
GmaPHAS3g100786643.2@21#1	3	4753533	4753808	LOC100786643	XR_005890653.1	transcript	1353	1628	2.385891005067611e-07	21.246	0.419	NB-LRR type disease resistance protein, transcript variant X2	PG,HC,HG	HC372	395	yes	no	0
GmaPHAS1g100788025.2@21#1	1	51942986	51943175	LOC100788025	XR_005891917.1	transcript	761	950	2.166726648779738e-11	39.978	1.0	disease resistance RPP8-like protein 3, transcript variant X2	PG,HC,PC,HG	HC378	396	yes	yes	2
GmaPHAS6g100792025.4@21#1	6	11888060	11889044	LOC100792025	XR_005891995.1	transcript	704	1525	3.3718214823540753e-10	192.362	0.359	toll/interleukin-1 receptor-like protein, transcript variant X1	PG,HC,PC,HG	HC379	397	yes	no	0
GmaPHAS6g100792025.4@21#2	6	11888061	11888586	LOC100792025	XR_005891995.1	transcript	705	1230	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X1	HC	HC380	398	yes	no	0
GmaPHAS6g100792025.4@21#3	6	11888175	11888511	LOC100792025	XR_005891995.1	transcript	819	1155	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X1	HC	HC381	399	yes	no	0
GmaPHAS6g100792025.4@21#4	6	11888499	11889021	LOC100792025	XR_005891995.1	transcript	1143	1502	3.0792809117844443e-08	-	-	toll/interleukin-1 receptor-like protein, transcript variant X1	HC	HC382	400	yes	no	0
GmaPHAS6g100792025.5@21#1	6	11888184	11889045	LOC100792025	XR_005891996.1	transcript	2	720	9.247764510292022e-08	187.844	0.357	toll/interleukin-1 receptor-like protein, transcript variant X4	PG,HC,PC,HG	HC383	401	yes	no	0
GmaPHAS6g100792025.5@21#2	6	11888185	11888586	LOC100792025	XR_005891996.1	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X4	HC	HC384	402	yes	no	0
GmaPHAS6g100792025.5@21#3	6	11888215	11888511	LOC100792025	XR_005891996.1	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X4	HC	HC385	403	yes	no	0
GmaPHAS6g100792025.5@21#4	6	11888499	11889020	LOC100792025	XR_005891996.1	transcript	317	695	7.013322969499126e-09	-	-	toll/interleukin-1 receptor-like protein, transcript variant X4	HC	HC386	404	yes	no	0
GmaPHAS6g100792025.6@21#1	6	11888184	11889044	LOC100792025	XR_005891997.1	transcript	2	699	9.247764510292022e-08	186.08	0.36	toll/interleukin-1 receptor-like protein, transcript variant X6	PG,HC,PC,HG	HC387	405	yes	no	0
GmaPHAS6g100792025.6@21#2	6	11888185	11888586	LOC100792025	XR_005891997.1	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X6	HC	HC388	406	yes	no	0
GmaPHAS6g100792025.6@21#3	6	11888215	11888511	LOC100792025	XR_005891997.1	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X6	HC	HC389	407	yes	no	0
GmaPHAS6g100792025.6@21#4	6	11888499	11889021	LOC100792025	XR_005891997.1	transcript	317	676	3.0792809117844443e-08	-	-	toll/interleukin-1 receptor-like protein, transcript variant X6	HC	HC390	408	yes	no	0
GmaPHAS6g100792025.7@21#1	6	11888184	11888818	LOC100792025	XR_005891998.1	transcript	2	636	9.247764510292022e-08	176.335	0.361	toll/interleukin-1 receptor-like protein, transcript variant X7	PG,HC,PC,HG	HC391	409	yes	no	0
GmaPHAS6g100792025.7@21#2	6	11888185	11888586	LOC100792025	XR_005891998.1	transcript	3	404	0.00026586864242637354	-	-	toll/interleukin-1 receptor-like protein, transcript variant X7	HC	HC392	410	yes	no	0
GmaPHAS6g100792025.7@21#3	6	11888215	11888511	LOC100792025	XR_005891998.1	transcript	33	329	0.00019322204465391083	-	-	toll/interleukin-1 receptor-like protein, transcript variant X7	HC	HC393	411	yes	no	0
GmaPHAS6g100792025.7@21#4	6	11888499	11888856	LOC100792025	XR_005891998.1	transcript	317	674	2.368627851778594e-07	-	-	toll/interleukin-1 receptor-like protein, transcript variant X7	HC	HC394	412	yes	no	0
GmaPHAS8g100801950.2@21#1	8	23481807	23481658	LOC100801950	XR_005892655.1	transcript	695	844	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3, transcript variant X2	HC,HG	HC395	413	yes	no	0
GmaPHAS8g100801950.3@21#1	8	23481807	23481658	LOC100801950	XR_005892656.1	transcript	696	845	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3, transcript variant X5	HC,HG	HC396	414	yes	no	0
GmaPHAS1g100788025.3@21#1	1	51942986	51943175	LOC100788025	XR_412916.4	transcript	761	950	2.166726648779738e-11	39.978	1.0	disease resistance RPP8-like protein 3, transcript variant X3	PG,HC,PC,HG	HC397	415	yes	yes	2
GmaPHAS2g100809794.2@21#1	2	16118943	16119132	LOC100809794	XR_413134.3	transcript	1752	1941	0.00011785988460805209	36.916	0.981	protein TRANSPORT INHIBITOR RESPONSE 1A, transcript variant X1	PG,HC,PC,HG	HC399	416	yes	yes	10
GmaPHAS3g100786643.3@21#1	3	4753533	4753808	LOC100786643	XR_413423.4	transcript	1353	1628	2.385891005067611e-07	21.246	0.419	NB-LRR type disease resistance protein, transcript variant X4	PG,HC,HG	HC400	417	yes	no	0
GmaPHAS3g100786643.4@21#1	3	4753533	4753808	LOC100786643	XR_413424.4	transcript	1353	1628	2.385891005067611e-07	21.246	0.419	NB-LRR type disease resistance protein, transcript variant X3	PG,HC,HG	HC401	418	yes	no	0
GmaPHAS8g100801950.4@21#1	8	23481807	23481658	LOC100801950	XR_415635.4	transcript	695	844	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3, transcript variant X3	HC,HG	HC402	419	yes	no	0
GmaPHAS8g100801950.5@21#1	8	23481807	23481658	LOC100801950	XR_415636.4	transcript	696	845	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3, transcript variant X4	HC,HG	HC403	420	yes	no	0
GmaPHAS8g100801950.6@21#1	8	23481807	23481658	LOC100801950	XR_415637.4	transcript	699	848	5.963795363023095e-07	-	-	putative disease resistance RPP13-like protein 3, transcript variant X6	HC,HG	HC404	421	yes	no	0
GmaPHAS10g100779337.2@21#1	10	1860390	1860201	LOC100779337	XR_416203.4	transcript	1727	1916	6.889642973102218e-09	51.652	0.983	protein TRANSPORT INHIBITOR RESPONSE 1B, transcript variant X2	PG,HC,PC,HG	HC405	422	yes	yes	10
GmaPHAS16g100812093.2@21#1	16	32302349	32302624	LOC100812093	XR_418876.4	transcript	410	685	4.557149553060341e-08	24.429	0.86	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial, transcript variant X2	PG,HC,PC,HG	HC412	423	yes	no	0
GmaPHAS16g100812093.2@21#2	16	32302740	32302906	LOC100812093	XR_418876.4	transcript	801	967	0.00021467121359237427	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial, transcript variant X2	HC,HG	HC413	424	yes	no	0
GmaPHAS16g100812093.2@21#3	16	32302762	32303161	LOC100812093	XR_418876.4	transcript	823	1222	3.969431293043118e-07	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial, transcript variant X2	HC	HC414	425	yes	no	0
GmaPHAS16g100812093.2@21#4	16	32306774	32306879	LOC100812093	XR_418876.4	transcript	-	-	6.13981849851314e-06	-	-	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial, transcript variant X2	HG	HG201	426	yes	no	0
GmaPHAS16g100818504.5@21#1	16	32636156	32636347	LOC100818504	XR_418882.4	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X1	PG,HC,PC,HG	HC415	428	yes	no	0
GmaPHAS16g100818504.5@21#2	16	32636548	32636695	LOC100818504	XR_418882.4	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X1	HG	HG217	429	yes	no	0
GmaPHAS16g100818504.6@21#1	16	32636156	32636347	LOC100818504	XR_418884.4	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X5	PG,HC,PC,HG	HC416	430	yes	no	0
GmaPHAS16g100818504.6@21#2	16	32636548	32636695	LOC100818504	XR_418884.4	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X5	HG	HG217	431	yes	no	0
GmaPHAS16g100818504.7@21#1	16	32636156	32636347	LOC100818504	XR_418885.4	transcript	277	468	7.70735495358203e-05	20.009	0.62	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X6	PG,HC,PC,HG	HC417	432	yes	no	0
GmaPHAS16g100818504.7@21#2	16	32636548	32636695	LOC100818504	XR_418885.4	transcript	-	-	1.0950602370746376e-05	-	-	pentatricopeptide repeat-containing protein At1g12300, mitochondrial, transcript variant X6	HG	HG217	433	yes	no	0
GmaPHAS3g100794060.2@21#1	3	4977424	4977615	LOC100794060	XR_001387387.3	transcript	-	-	0.000288402356874658	-	-	putative disease resistance RPP13-like protein 1, transcript variant X1	HG	HG22	434	yes	no	0
GmaPHAS3g100816233.2@21#1	3	36457536	36457725	LOC100816233	XR_005890749.1	transcript	-	-	8.084972887800737e-05	41.28	0.791	tRNA-uridine aminocarboxypropyltransferase 2, transcript variant X4	PG,HG	HG27	435	yes	no	0
GmaPHAS3g100816233.2@21#2	3	36457547	36457797	LOC100816233	XR_005890749.1	transcript	-	-	0.0004292545149059525	-	-	tRNA-uridine aminocarboxypropyltransferase 2, transcript variant X4	HG	HG28	436	yes	no	0
GmaPHAS6g100500528.1@21#1	6	45155147	45155231	LOC100500528	XR_003267301.2	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X10	PG,HG	HG59	437	yes	no	0
GmaPHAS6g100500528.2@21#1	6	45155147	45155231	LOC100500528	XR_414534.4	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X8	PG,HG	HG59	438	yes	no	0
GmaPHAS6g100500528.3@21#1	6	45155147	45155231	LOC100500528	XR_003267298.2	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X6	PG,HG	HG59	439	yes	no	0
GmaPHAS6g100500528.4@21#1	6	45155147	45155231	LOC100500528	XR_005891776.1	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X7	PG,HG	HG59	440	yes	no	0
GmaPHAS6g100500528.5@21#1	6	45155147	45155231	LOC100500528	XR_001388581.3	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X3	PG,HG	HG59	441	yes	no	0
GmaPHAS6g100500528.6@21#1	6	45155147	45155231	LOC100500528	XR_001388580.3	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X5	PG,HG	HG59	442	yes	no	0
GmaPHAS6g100500528.7@21#1	6	45155147	45155231	LOC100500528	XR_005891775.1	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X4	PG,HG	HG59	443	yes	no	0
GmaPHAS6g100500528.8@21#1	6	45155147	45155231	LOC100500528	XR_414531.4	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X1	PG,HG	HG59	444	yes	no	0
GmaPHAS6g100500528.9@21#1	6	45155147	45155231	LOC100500528	XR_003267297.2	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X2	PG,HG	HG59	445	yes	no	0
GmaPHAS6g100500528.10@21#1	6	45155147	45155231	LOC100500528	NR_148952.1	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein	PG,HG	HG59	446	yes	no	0
GmaPHAS6g100500528.11@21#1	6	45155147	45155231	LOC100500528	XR_003267299.2	transcript	-	-	0.0001914798351897706	16.741	1.0	putative disease resistance protein, transcript variant X9	PG,HG	HG59	447	yes	no	0
GmaPHAS6g100785853.2@21#1	6	45319738	45319822	LOC100785853	XR_005892092.1	transcript	-	-	1.9970289559669326e-05	21.272	1.0	uncharacterized LOC100785853, transcript variant X5	PG,HG	HG60	448	yes	no	0
GmaPHAS6g100785853.3@21#1	6	45319738	45319822	LOC100785853	XR_005892090.1	transcript	-	-	1.9970289559669326e-05	21.272	1.0	uncharacterized LOC100785853, transcript variant X3	PG,HG	HG60	449	yes	no	0
GmaPHAS6g100785853.4@21#1	6	45319738	45319822	LOC100785853	XR_005892091.1	transcript	-	-	1.9970289559669326e-05	21.272	1.0	uncharacterized LOC100785853, transcript variant X4	PG,HG	HG60	450	yes	no	0
GmaPHAS6g100785853.5@21#1	6	45319738	45319822	LOC100785853	XR_005892089.1	transcript	-	-	1.9970289559669326e-05	21.272	1.0	uncharacterized LOC100785853, transcript variant X2	PG,HG	HG60	451	yes	no	0
GmaPHAS14g100784272.1@21#1	14	1326600	1326726	LOC100784272	XR_001384708.2	transcript	-	-	0.00017513967568394244	-	-	65-kDa microtubule-associated protein 1-like	HG	HG135	452	yes	no	0
GmaPHAS9g106794686.1@21#1	9	48842928	48843157	LOC106794686	XR_001382883.2	lnc_RNA	160	389	3.2220960005818184e-06	-	-	uncharacterized LOC106794686	HC	HC325	453	yes	no	0
GmaPHAS9g106794686.1@21#2	9	48843413	48843686	LOC106794686	XR_001382883.2	lnc_RNA	645	918	3.0180631867601235e-07	66.925	0.422	uncharacterized LOC106794686	PG,HC,PC,HG	HC326	454	yes	no	0
GmaPHAS14g102665687.1@21#1	14	29849952	29849214	LOC102665687	XR_001384761.3	lnc_RNA	385	513	4.245073118464207e-05	-	-	uncharacterized LOC102665687, transcript variant X1	HC	HC327	455	yes	no	0
GmaPHAS14g102665687.1@21#2	14	29849650	29849192	LOC102665687	XR_001384761.3	lnc_RNA	430	535	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X1	HC	HC328	456	yes	no	0
GmaPHAS14g102665687.2@21#1	14	29849952	29849214	LOC102665687	XR_001384762.3	lnc_RNA	344	472	4.245073118464207e-05	-	-	uncharacterized LOC102665687, transcript variant X3	HC	HC329	457	yes	no	0
GmaPHAS14g102665687.2@21#2	14	29849650	29849192	LOC102665687	XR_001384762.3	lnc_RNA	389	494	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X3	HC	HC330	458	yes	no	0
GmaPHAS14g102665687.3@21#1	14	29849952	29849214	LOC102665687	XR_001384763.3	lnc_RNA	1510	1638	4.245073118464207e-05	32.192	0.875	uncharacterized LOC102665687, transcript variant X5	HC,PC	HC331	459	yes	no	0
GmaPHAS14g102665687.3@21#2	14	29849650	29849192	LOC102665687	XR_001384763.3	lnc_RNA	1555	1660	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X5	HC	HC332	460	yes	no	0
GmaPHAS12g100796747.1@21#1	12	32618007	32617190	LOC100796747	XR_005887394.1	lnc_RNA	577	1394	0.00041112055359606185	400.32	0.601	uncharacterized LOC100796747, transcript variant X1	PG,HC,PC,HG	HC351	461	yes	yes	1
GmaPHAS12g100796747.1@21#2	12	32617964	32617273	LOC100796747	XR_005887394.1	lnc_RNA	620	1311	2.6843139987945347e-07	-	-	uncharacterized LOC100796747, transcript variant X1	HC	HC352	462	yes	yes	1
GmaPHAS12g100796747.1@21#3	12	32617936	32617619	LOC100796747	XR_005887394.1	lnc_RNA	648	965	0.0003634311591252215	-	-	uncharacterized LOC100796747, transcript variant X1	HC	HC353	463	yes	no	0
GmaPHAS12g100796747.2@21#1	12	32618007	32617190	LOC100796747	XR_005887395.1	lnc_RNA	576	1393	0.00041112055359606185	400.32	0.601	uncharacterized LOC100796747, transcript variant X2	PG,HC,PC,HG	HC354	464	yes	yes	1
GmaPHAS12g100796747.2@21#2	12	32617964	32617273	LOC100796747	XR_005887395.1	lnc_RNA	619	1310	2.6843139987945347e-07	-	-	uncharacterized LOC100796747, transcript variant X2	HC	HC355	465	yes	yes	1
GmaPHAS12g100796747.2@21#3	12	32617936	32617619	LOC100796747	XR_005887395.1	lnc_RNA	647	964	0.0003634311591252215	-	-	uncharacterized LOC100796747, transcript variant X2	HC	HC356	466	yes	no	0
GmaPHAS12g100796747.3@21#1	12	32618007	32617190	LOC100796747	XR_005887396.1	lnc_RNA	578	1395	0.00041112055359606185	400.32	0.601	uncharacterized LOC100796747, transcript variant X3	PG,HC,PC,HG	HC357	467	yes	yes	1
GmaPHAS12g100796747.3@21#2	12	32617964	32617273	LOC100796747	XR_005887396.1	lnc_RNA	621	1312	2.6843139987945347e-07	-	-	uncharacterized LOC100796747, transcript variant X3	HC	HC358	468	yes	yes	1
GmaPHAS12g100796747.3@21#3	12	32617936	32617619	LOC100796747	XR_005887396.1	lnc_RNA	649	966	0.0003634311591252215	-	-	uncharacterized LOC100796747, transcript variant X3	HC	HC359	469	yes	no	0
GmaPHAS14g102665687.4@21#1	14	29849952	29849214	LOC102665687	XR_005888324.1	lnc_RNA	8291	8419	4.245073118464207e-05	-	-	uncharacterized LOC102665687, transcript variant X2	HC	HC360	470	yes	no	0
GmaPHAS14g102665687.4@21#2	14	29849650	29849192	LOC102665687	XR_005888324.1	lnc_RNA	8336	8441	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X2	HC	HC361	471	yes	no	0
GmaPHAS14g102665687.5@21#1	14	29860223	29849214	LOC102665687	XR_005888325.1	lnc_RNA	256	424	4.245073118464207e-05	-	-	uncharacterized LOC102665687, transcript variant X6	HC	HC362	472	yes	yes	2
GmaPHAS14g102665687.5@21#2	14	29849650	29849192	LOC102665687	XR_005888325.1	lnc_RNA	341	446	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X6	HC	HC363	473	yes	yes	2
GmaPHAS14g102660971.1@21#1	14	6233221	6233622	LOC102660971	XR_005888492.1	lnc_RNA	642	936	3.111571042269465e-11	27.7	0.332	uncharacterized LOC102660971	PG,HC,PC,HG	HC364	474	yes	no	0
GmaPHAS14g102660971.1@21#2	14	6233541	6233812	LOC102660971	XR_005888492.1	lnc_RNA	855	1126	0.0003531646478474587	-	-	uncharacterized LOC102660971	HC	HC365	475	yes	no	0
GmaPHAS14g106795929.1@21#1	14	6285900	6285501	LOC106795929	XR_005888494.1	lnc_RNA	645	937	2.496645600293168e-08	27.895	0.444	uncharacterized LOC106795929	PG,HC,PC,HG	HC366	476	yes	no	0
GmaPHAS2g102662360.1@21#1	2	9321046	9320857	LOC102662360	XR_005889630.1	lnc_RNA	228	417	1.9271192284606934e-08	26.764	0.957	uncharacterized LOC102662360, transcript variant X1	PG,HC,PC,HG	HC370	477	yes	no	0
GmaPHAS4g102661705.1@21#1	4	42523720	42523848	LOC102661705	XR_005891158.1	lnc_RNA	152	280	0.00019985380014218932	-	-	uncharacterized LOC102661705	HC	HC373	478	yes	no	0
GmaPHAS6g121174966.1@21#1	6	38568218	38568029	LOC121174966	XR_005891804.1	lnc_RNA	784	973	0.000335946729899413	36.298	0.944	uncharacterized LOC121174966, transcript variant X1	PG,HC,PC,HG	HC374	479	yes	no	0
GmaPHAS6g121174966.2@21#1	6	38568218	38568029	LOC121174966	XR_005891805.1	lnc_RNA	784	973	0.000335946729899413	36.298	0.944	uncharacterized LOC121174966, transcript variant X2	PG,HC,PC,HG	HC375	480	yes	no	0
GmaPHAS6g121174966.3@21#1	6	38568218	38568029	LOC121174966	XR_005891806.1	lnc_RNA	455	644	0.000335946729899413	36.298	0.944	uncharacterized LOC121174966, transcript variant X3	PG,HC,PC,HG	HC376	481	yes	no	0
GmaPHAS6g121174966.4@21#1	6	38568218	38568029	LOC121174966	XR_005891807.1	lnc_RNA	784	973	0.000335946729899413	36.298	0.944	uncharacterized LOC121174966, transcript variant X4	PG,HC,PC,HG	HC377	482	yes	no	0
GmaPHAS2g102662360.2@21#1	2	9321046	9320857	LOC102662360	XR_413091.4	lnc_RNA	230	419	1.9271192284606934e-08	26.764	0.957	uncharacterized LOC102662360, transcript variant X2	PG,HC,PC,HG	HC398	483	yes	no	0
GmaPHAS10g102669777.1@21#1	10	4440176	4440302	LOC102669777	XR_416220.4	lnc_RNA	607	733	0.00018351607205061544	35.187	0.928	uncharacterized LOC102669777	PG,HC,HG	HC406	484	yes	no	0
GmaPHAS13g102669800.1@21#1	13	18296454	18296947	LOC102669800	XR_417365.4	lnc_RNA	355	712	1.171541158294379e-11	134.221	0.632	uncharacterized LOC102669800	PG,HC,PC,HG	HC407	486	yes	yes	2
GmaPHAS13g102669800.1@21#2	13	18296455	18296929	LOC102669800	XR_417365.4	lnc_RNA	356	694	6.661425886071949e-13	-	-	uncharacterized LOC102669800	HC	HC408	487	yes	yes	2
GmaPHAS14g102661693.1@21#1	14	6294942	6294551	LOC102661693	XR_417902.4	lnc_RNA	256	468	1.3160252477272036e-05	34.96	0.385	uncharacterized LOC102661693	PG,HC,PC,HG	HC409	488	yes	yes	2
GmaPHAS14g102665687.6@21#1	14	29860223	29849214	LOC102665687	XR_418063.4	lnc_RNA	297	465	4.245073118464207e-05	-	-	uncharacterized LOC102665687, transcript variant X4	HC	HC410	489	yes	yes	2
GmaPHAS14g102665687.6@21#2	14	29849650	29849192	LOC102665687	XR_418063.4	lnc_RNA	382	487	4.632210139417279e-05	-	-	uncharacterized LOC102665687, transcript variant X4	HC	HC411	490	yes	yes	2
GmaPHAS17g102666089.1@21#1	17	40566962	40567714	LOC102666089	XR_419260.3	lnc_RNA	352	730	8.164693443822776e-15	114.937	0.683	uncharacterized LOC102666089	PG,HC,PC,HG	HC418	491	yes	yes	2
GmaPHAS17g102666089.1@21#2	17	40567181	40567818	LOC102666089	XR_419260.3	lnc_RNA	414	834	4.943944768152749e-15	-	-	uncharacterized LOC102666089	HC,HG	HC419	492	yes	yes	2
GmaPHAS17g102666089.1@21#3	17	40567238	40567833	LOC102666089	XR_419260.3	lnc_RNA	471	849	1.5954176802395338e-14	-	-	uncharacterized LOC102666089	HC	HC420	493	yes	no	0
GmaPHAS18g100817479.1@21#1	18	54225779	54226064	LOC100817479	XR_419661.4	lnc_RNA	226	415	1.7458575110653478e-05	27.271	0.775	uncharacterized LOC100817479	PG,HC,PC,HG	HC421	494	yes	no	0
GmaPHAS2gIntergenic.1@21#1	2	47052382	47052594	Intergenic	NC_016089.4	Intergenic	-	-	1.9042433537719283e-05	54.007	0.476	None	PG,HG	HG10	502	yes	no	0
GmaPHAS3gIntergenic.1@21#1	3	29360702	29360807	Intergenic	NC_016090.4	Intergenic	-	-	6.981269848087751e-07	-	-	None	HG	HG25	503	yes	no	0
GmaPHAS3gIntergenic.1@21#2	3	29390546	29390651	Intergenic	NC_016090.4	Intergenic	-	-	6.981269848087751e-07	-	-	None	HG	HG26	504	yes	no	0
GmaPHAS4gIntergenic.1@21#1	4	45594532	45594826	Intergenic	NC_016091.4	Intergenic	-	-	9.032732966530143e-20	102.891	0.849	None	PG,HG	HG34	505	yes	no	0
GmaPHAS4gIntergenic.1@21#2	4	47856495	47856728	Intergenic	NC_016091.4	Intergenic	-	-	0.0002559596882704956	188.586	0.389	None	PG,HG	HG37	506	yes	no	0
GmaPHAS4gIntergenic.1@21#3	4	47856803	47857034	Intergenic	NC_016091.4	Intergenic	-	-	6.266404593670795e-05	-	-	None	HG	HG38	507	yes	no	0
GmaPHAS8gIntergenic.1@21#1	8	14437747	14438022	Intergenic	NC_038244.2	Intergenic	-	-	1.0667165650163818e-08	48.255	0.546	None	PG,HG	HG70	509	yes	no	0
GmaPHAS9gIntergenic.1@21#1	9	40873321	40873573	Intergenic	NC_038245.2	Intergenic	-	-	6.1268025052864916e-06	-	-	None	HG	HG83	511	yes	no	0
GmaPHAS9gIntergenic.1@21#2	9	47951395	47951628	Intergenic	NC_038245.2	Intergenic	-	-	0.00014070737938582105	21.366	0.476	None	PG,HG	HG86	512	yes	no	0
GmaPHAS9gIntergenic.1@21#3	9	48821366	48821534	Intergenic	NC_038245.2	Intergenic	-	-	2.9505332173204073e-05	21.629	0.932	None	PG,HG	HG90	513	yes	no	0
GmaPHAS9gIntergenic.1@21#4	9	50076057	50076370	Intergenic	NC_038245.2	Intergenic	-	-	1.0364050789836495e-10	48.563	0.764	None	PG,HG	HG92	514	yes	no	0
GmaPHAS10gIntergenic.1@21#1	10	1407038	1407145	Intergenic	NC_038246.2	Intergenic	-	-	0.00034900928976098463	-	-	None	HG	HG93	515	yes	no	0
GmaPHAS11gIntergenic.1@21#1	11	10991462	10991674	Intergenic	NC_038247.2	Intergenic	-	-	9.095139750343046e-05	53.447	0.374	None	PG,HG	HG98	517	yes	no	0
GmaPHAS11gIntergenic.1@21#2	11	35448998	35449714	Intergenic	NC_038247.2	Intergenic	-	-	3.952069286539233e-17	145.976	0.486	None	PG,HG	HG99	518	yes	no	0
GmaPHAS11gIntergenic.1@21#3	11	35448999	35449675	Intergenic	NC_038247.2	Intergenic	-	-	2.425095206640243e-13	-	-	None	HG	HG100	519	yes	no	0
GmaPHAS11gIntergenic.1@21#4	11	35449209	35449482	Intergenic	NC_038247.2	Intergenic	-	-	9.254449974227267e-09	-	-	None	HG	HG101	520	yes	no	0
GmaPHAS12gIntergenic.1@21#1	12	4926174	4926491	Intergenic	NC_038248.2	Intergenic	-	-	4.6084575395341404e-08	-	-	None	HG	HG104	521	yes	no	0
GmaPHAS13gIntergenic.1@21#1	13	24101893	24101977	Intergenic	NC_038249.2	Intergenic	-	-	4.5496876227033814e-05	35.799	0.96	None	PG,HG	HG117	522	yes	no	0
GmaPHAS14gIntergenic.1@21#1	14	2849508	2849804	Intergenic	NC_038250.2	Intergenic	-	-	1.1452488166838763e-06	32.323	0.399	None	PG,HG	HG138	524	yes	no	0
GmaPHAS14gIntergenic.1@21#2	14	3946236	3946444	Intergenic	NC_038250.2	Intergenic	-	-	0.00042573584540118396	-	-	None	HG	HG139	525	yes	no	0
GmaPHAS14gIntergenic.1@21#3	14	6228529	6228718	Intergenic	NC_038250.2	Intergenic	-	-	0.00029336076906159056	20.29	0.333	None	PG,HG	HG140	526	yes	no	0
GmaPHAS14gIntergenic.1@21#4	14	6290420	6290632	Intergenic	NC_038250.2	Intergenic	-	-	2.047155574819044e-06	30.006	0.431	None	PG,HG	HG144	527	yes	no	0
GmaPHAS16gIntergenic.1@21#1	16	4646794	4646943	Intergenic	NC_038252.2	Intergenic	-	-	0.00034900928976098463	-	-	None	HG	HG174	529	yes	no	0
GmaPHAS18gIntergenic.1@21#1	18	2747664	2747853	Intergenic	NC_038254.2	Intergenic	-	-	0.0003793727318720089	60.781	0.654	None	PG,HG	HG244	530	yes	no	0
GmaPHAS18gIntergenic.1@21#2	18	56798522	56798818	Intergenic	NC_038254.2	Intergenic	-	-	8.40835770832526e-12	83.474	0.522	None	PG,HG	HG249	531	yes	no	0
GmaPHAS18gIntergenic.1@21#3	18	56798523	56798754	Intergenic	NC_038254.2	Intergenic	-	-	2.3104478119270918e-05	-	-	None	HG	HG250	532	yes	no	0
GmaPHAS19gIntergenic.1@21#1	19	40486165	40486524	Intergenic	NC_038255.2	Intergenic	-	-	1.7735753098500223e-05	42.046	0.509	None	PG,HG	HG260	533	yes	no	0
GmaPHAS19gIntergenic.1@21#2	19	40486208	40486502	Intergenic	NC_038255.2	Intergenic	-	-	2.1578202507385861e-16	-	-	None	HG	HG261	534	yes	no	0
GmaPHAS20gIntergenic.1@21#1	20	158398	158608	Intergenic	NC_038256.2	Intergenic	-	-	1.1115800642803655e-05	25.732	0.542	None	PG,HG	HG268	535	yes	no	0
GmaPHAS20gIntergenic.1@21#2	20	409867	410077	Intergenic	NC_038256.2	Intergenic	-	-	3.4337003605284485e-06	-	-	None	HG	HG269	536	yes	no	0
GmaPHAS9g100805537.1@21#2	9	2057155	2057325	LOC100805537	XM_003535056.5	mRNA	-	-	-	17.663	0.985	endoribonuclease Dicer homolog 2 isoform X2	PG	PG45	54	yes	no	0
GmaPHAS9g100805537.2@21#2	9	2057155	2057325	LOC100805537	XM_041005324.1	mRNA	-	-	-	17.663	0.985	endoribonuclease Dicer homolog 2 isoform X1	PG	PG45	261	yes	no	0
GmaPHAS13g100813297.1@21#1	13	18739314	18739377	LOC100813297	XM_003542593.5	mRNA	-	-	-	17.293	0.873	uncharacterized protein LOC100813297	PG	PG69	365	yes	no	0
GmaPHAS16g100798421.1@21#1	16	29667186	29667289	LOC100798421	XM_041010495.1	mRNA	-	-	-	20.302	1.0	disease resistance protein RUN1	PG	PG98	366	yes	no	0
GmaPHAS16g100798421.2@21#1	16	29667186	29667289	LOC100798421	XM_003548835.5	mRNA	-	-	-	20.302	1.0	disease resistance protein RUN1	PG	PG98	367	yes	no	0
GmaPHAS16g100798421.3@21#1	16	29667186	29667289	LOC100798421	XM_041010494.1	mRNA	-	-	-	20.302	1.0	disease resistance protein RUN1	PG	PG98	368	yes	no	0
GmaPHAS16g100798421.4@21#1	16	29667186	29667289	LOC100798421	XM_041010493.1	mRNA	-	-	-	20.302	1.0	disease resistance protein RUN1	PG	PG98	369	yes	no	0
GmaPHAS16g100812093.2@21#5	16	32306362	32306486	LOC100812093	XR_418876.4	transcript	-	-	-	16.969	0.636	putative pentatricopeptide repeat-containing protein At1g12700, mitochondrial, transcript variant X2	PG	PG105	427	yes	no	0
GmaPHAS10g102669777.1@21#2	10	4442216	4442342	LOC102669777	XR_416220.4	lnc_RNA	1350	1476	-	46.859	0.964	uncharacterized LOC102669777	PG,PC	PC185	485	yes	yes	1
GmaPHAS18g102666096.1@21#1	18	48796754	48796859	LOC102666096	XR_005889523.1	lnc_RNA	96	201	-	37.156	0.993	uncharacterized LOC102666096, transcript variant X2	PG,PC	PC167	495	yes	no	0
GmaPHAS18g102666096.2@21#1	18	48796754	48796859	LOC102666096	XR_005889524.1	lnc_RNA	96	201	-	37.156	0.993	uncharacterized LOC102666096, transcript variant X3	PG,PC	PC168	496	yes	no	0
GmaPHAS9g100810152.1@21#1	9	2723995	2723636	LOC100810152	XR_415837.4	lnc_RNA	401	760	-	61.891	0.305	uncharacterized LOC100810152	PC	PC183	497	yes	no	0
GmaPHAS15g100788533.1@21#1	15	11180951	11180739	LOC100788533	XR_418344.4	lnc_RNA	375	587	-	51.515	0.382	uncharacterized LOC100788533	PG,PC	PC188	498	yes	yes	6
GmaPHAS18g102666096.3@21#1	18	48796754	48796859	LOC102666096	XR_419628.4	lnc_RNA	96	201	-	37.156	0.993	uncharacterized LOC102666096, transcript variant X1	PG,PC	PC194	499	yes	no	0
GmaPHAS2g102666058.1@21#1	2	18974812	18975064	LOC102666058	XR_413151.4	lnc_RNA	-	-	-	25.595	0.926	uncharacterized LOC102666058	PG	PG8	500	yes	no	0
GmaPHAS2gIntergenic.1@21#2	2	8177933	8177977	Intergenic	NC_016089.4	Intergenic	-	-	-	23.562	0.815	None	PG	PG10	501	yes	no	0
GmaPHAS8gIntergenic.1@21#2	8	14037058	14037121	Intergenic	NC_038244.2	Intergenic	-	-	-	17.293	0.873	None	PG	PG39	508	yes	no	0
GmaPHAS9gIntergenic.1@21#5	9	25504720	25504951	Intergenic	NC_038245.2	Intergenic	-	-	-	16.431	0.444	None	PG	PG44	510	yes	no	0
GmaPHAS10gIntergenic.1@21#2	10	6612753	6612986	Intergenic	NC_038246.2	Intergenic	-	-	-	15.756	0.509	None	PG	PG59	516	yes	no	0
GmaPHAS13gIntergenic.1@21#2	13	36029187	36029376	Intergenic	NC_038249.2	Intergenic	-	-	-	16.54	0.533	None	PG	PG79	523	yes	no	0
GmaPHAS16gIntergenic.1@21#2	16	4584295	4584444	Intergenic	NC_038252.2	Intergenic	-	-	-	16.335	0.929	None	PG	PG119	528	yes	no	0